RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 HEXIM1O94992 359 aaKnown RBP17.61■□□□□ 0.41
NPHP3-201ENST00000337331 POLA2Q14181 598 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 PDCD2Q16342 344 aaPredicted RBP17.61■□□□□ 0.41
NPHP3-201ENST00000337331 RAD9BQ6WBX8 426 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 INTS8Q75QN2 995 aaKnown RBP17.61■□□□□ 0.41
NPHP3-201ENST00000337331 MAEAQ7L5Y9 396 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 DNM3Q9UQ16 869 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 USP6P35125 1406 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 APBA1Q02410 837 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 NAA35Q5VZE5 725 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 OSBP2Q969R2 916 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 NAP1L3Q99457 506 aaPredicted RBP17.61■□□□□ 0.41
NPHP3-201ENST00000337331 STIM2Q9P246 746 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 BIN2Q9UBW5 565 aaPredicted RBP17.61■□□□□ 0.41
NPHP3-201ENST00000337331 GMNCA6NCL1 334 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 SCG2P13521 617 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 CDC25CP30307 473 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 DIXDC1Q155Q3 683 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 GLT8D2Q9H1C3 349 aa17.61■□□□□ 0.41
NPHP3-201ENST00000337331 ARPP21Q9UBL0 812 aaPredicted RBP17.61■□□□□ 0.41
NPHP3-201ENST00000337331 MFAP3LO75121 409 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 NDUFA10O95299 355 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 CYP27A1Q02318 531 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 SETDB1Q15047 1291 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 ZYXQ15942 572 aaKnown RBP17.6■□□□□ 0.41
NPHP3-201ENST00000337331 RBM17Q96I25 401 aaKnown RBP17.6■□□□□ 0.41
NPHP3-201ENST00000337331 ACTN4O43707 911 aaKnown RBP17.6■□□□□ 0.41
NPHP3-201ENST00000337331 STAMBPO95630 424 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 DNM2P50570 870 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 HDLBPQ00341 1268 aaKnown RBP17.6■□□□□ 0.41
NPHP3-201ENST00000337331 GPKOWQ92917 476 aaPredicted RBP eCLIP17.6■□□□□ 0.41
NPHP3-201ENST00000337331 SLAIN2Q9P270 581 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 SERPINA10Q9UK55 444 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.6■□□□□ 0.41
NPHP3-201ENST00000337331 CCDC169A6NNP5 214 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 CPP00450 1065 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 RPS6KA1Q15418 735 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 EMBQ6PCB8 327 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 ZNF365Q70YC5 407 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 OSBPL9Q96SU4 736 aa17.6■□□□□ 0.41
NPHP3-201ENST00000337331 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.6■□□□□ 0.417e-7■■■□□ 17.7
NPHP3-201ENST00000337331 NOVA2Q9UNW9 492 aaKnown RBP17.6■□□□□ 0.41
NPHP3-201ENST00000337331 ESYT3A0FGR9 886 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 ARHGEF35A5YM69 484 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 PREPLQ4J6C6 727 aaPredicted RBP17.59■□□□□ 0.41
NPHP3-201ENST00000337331 SFMBT2Q5VUG0 894 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 CCNI2Q6ZMN8 369 aaPredicted RBP17.59■□□□□ 0.41
NPHP3-201ENST00000337331 DAAM2Q86T65 1068 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 ENOX1Q8TC92 643 aaKnown RBP17.59■□□□□ 0.41
NPHP3-201ENST00000337331 SYMPKQ92797 1274 aaKnown RBP17.59■□□□□ 0.41
NPHP3-201ENST00000337331 MAN1B1Q9UKM7 699 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 ASAP1Q9ULH1 1129 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 HYOU1Q9Y4L1 999 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 ARHGAP31Q2M1Z3 1444 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 H7C1D1 291 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 EVI5O60447 810 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 HARSP12081 509 aaKnown RBP17.59■□□□□ 0.41
NPHP3-201ENST00000337331 KRT5P13647 590 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 TECP42680 631 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 KIF23Q02241 960 aaPredicted RBP17.59■□□□□ 0.41
NPHP3-201ENST00000337331 TCP10Q12799 353 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 MIPOL1Q8TD10 442 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 FAM114A2Q9NRY5 505 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 VIRMAQ69YN4 1812 aaKnown RBP17.59■□□□□ 0.41
NPHP3-201ENST00000337331 FLOT1O75955 427 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 GOLGA8HP0CJ92 632 aa17.59■□□□□ 0.41
NPHP3-201ENST00000337331 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.59■□□□□ 0.41
NPHP3-201ENST00000337331 FAM170AA1A519 330 aa17.58■□□□□ 0.41
NPHP3-201ENST00000337331 KLRF2D3W0D1 207 aa17.58■□□□□ 0.41
NPHP3-201ENST00000337331 ATP1A1P05023 1023 aaKnown RBP17.58■□□□□ 0.41
NPHP3-201ENST00000337331 TCP1P17987 556 aaKnown RBP17.58■□□□□ 0.41
NPHP3-201ENST00000337331 SLMAPQ14BN4 828 aa17.58■□□□□ 0.41
NPHP3-201ENST00000337331 USH1GQ495M9 461 aa17.58■□□□□ 0.41
NPHP3-201ENST00000337331 CTTNBP2NLQ9P2B4 639 aa17.58■□□□□ 0.41
NPHP3-201ENST00000337331 BUB1O43683 1085 aa17.58■□□□□ 0.41
NPHP3-201ENST00000337331 EXOC3O60645 756 aa17.58■□□□□ 0.41
NPHP3-201ENST00000337331 FNBP1Q96RU3 617 aa17.58■□□□□ 0.41
NPHP3-201ENST00000337331 KRT12Q99456 494 aa17.58■□□□□ 0.41
NPHP3-201ENST00000337331 GPHNQ9NQX3 736 aaPredicted RBP17.58■□□□□ 0.41
NPHP3-201ENST00000337331 GTPBP6O43824 516 aaPredicted RBP17.58■□□□□ 0.4
NPHP3-201ENST00000337331 CALUO43852 315 aaPredicted RBP17.58■□□□□ 0.4
NPHP3-201ENST00000337331 PEX26Q7Z412 305 aa17.58■□□□□ 0.4
NPHP3-201ENST00000337331 CSRNP2Q9H175 543 aa17.58■□□□□ 0.4
NPHP3-201ENST00000337331 RAB21Q9UL25 225 aa17.58■□□□□ 0.4
NPHP3-201ENST00000337331 PCDHB13Q9Y5F0 798 aa17.58■□□□□ 0.4
NPHP3-201ENST00000337331 MED23Q9ULK4 1368 aa17.58■□□□□ 0.4
NPHP3-201ENST00000337331 MAP3K15Q6ZN16 1313 aa17.58■□□□□ 0.4
NPHP3-201ENST00000337331 M0R2C6 588 aa17.58■□□□□ 0.4
NPHP3-201ENST00000337331 CCNHP51946 323 aaPredicted RBP17.58■□□□□ 0.4
NPHP3-201ENST00000337331 PTPROQ16827 1216 aa17.58■□□□□ 0.4
NPHP3-201ENST00000337331 ARHGEF2Q92974 986 aaKnown RBP17.58■□□□□ 0.4
NPHP3-201ENST00000337331 AIFM3Q96NN9 605 aa17.58■□□□□ 0.4
NPHP3-201ENST00000337331 ZNF185O15231 689 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 CIAO1O76071 339 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 GCNT3O95395 438 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 CHRNDQ07001 517 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 UHMK1Q8TAS1 419 aaKnown RBP17.57■□□□□ 0.4
NPHP3-201ENST00000337331 ARL8AQ96BM9 186 aa17.57■□□□□ 0.4
NPHP3-201ENST00000337331 UTP11Q9Y3A2 253 aaKnown RBP17.57■□□□□ 0.4
NPHP3-201ENST00000337331 CREB3O43889 395 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms