RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 MB21D2Q8IYB1 491 aaPredicted RBP18.11■□□□□ 0.49
SFXN1-201ENST00000321442 TACO1Q9BSH4 297 aaKnown RBP18.11■□□□□ 0.49
SFXN1-201ENST00000321442 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.11■□□□□ 0.49
SFXN1-201ENST00000321442 KDM6AO15550 1401 aaPredicted RBP18.11■□□□□ 0.49
SFXN1-201ENST00000321442 A0A1B0GUA9 196 aa18.11■□□□□ 0.49
SFXN1-201ENST00000321442 SPDYE3A6NKU9 549 aa18.11■□□□□ 0.49
SFXN1-201ENST00000321442 MOCS3O95396 460 aa18.11■□□□□ 0.49
SFXN1-201ENST00000321442 FDPSP14324 419 aaKnown RBP18.11■□□□□ 0.49
SFXN1-201ENST00000321442 PDE6BP35913 854 aa18.11■□□□□ 0.49
SFXN1-201ENST00000321442 LRRC41Q15345 812 aa18.11■□□□□ 0.49
SFXN1-201ENST00000321442 MGARPQ8TDB4 240 aa18.11■□□□□ 0.49
SFXN1-201ENST00000321442 PCDHB13Q9Y5F0 798 aa18.11■□□□□ 0.49
SFXN1-201ENST00000321442 SALL3Q9BXA9 1300 aa18.11■□□□□ 0.49
SFXN1-201ENST00000321442 GOLGA8KD6RF30 607 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 HEXIM1O94992 359 aaKnown RBP18.1■□□□□ 0.49
SFXN1-201ENST00000321442 LIFRP42702 1097 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 SLC1A4P43007 532 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 FMR1Q06787 632 aaKnown RBP eCLIP18.1■□□□□ 0.491e-8■□□□□ 10
SFXN1-201ENST00000321442 CCDC174Q6PII3 467 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 KRT25Q7Z3Z0 450 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 ENGASEQ8NFI3 743 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 RSRC1Q96IZ7 334 aaKnown RBP18.1■□□□□ 0.49
SFXN1-201ENST00000321442 POLD4Q9HCU8 107 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 CAMTA2O94983 1202 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 GSTA5Q7RTV2 222 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 TEKT1Q969V4 418 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 STRBPQ96SI9 672 aaKnown RBP18.1■□□□□ 0.49
SFXN1-201ENST00000321442 SERPINA10Q9UK55 444 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 USP17L3A6NCW0 530 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 USP17L4A6NCW7 530 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 SPOPO43791 374 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 PPFIA4O75335 1185 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 EEF2P13639 858 aaKnown RBP18.1■□□□□ 0.49
SFXN1-201ENST00000321442 MRPL12P52815 198 aaKnown RBP18.1■□□□□ 0.49
SFXN1-201ENST00000321442 ZNF772Q68DY9 489 aaPredicted RBP18.1■□□□□ 0.49
SFXN1-201ENST00000321442 USP17L1Q7RTZ2 530 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 CCDC50Q8IVM0 306 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 CCDC77Q9BR77 488 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 MRPL44Q9H9J2 332 aaKnown RBP18.1■□□□□ 0.49
SFXN1-201ENST00000321442 BSDC1Q9NW68 430 aaPredicted RBP18.1■□□□□ 0.49
SFXN1-201ENST00000321442 UBN2Q6ZU65 1347 aa18.1■□□□□ 0.49
SFXN1-201ENST00000321442 A0A087WUV0 522 aaPredicted RBP18.09■□□□□ 0.49
SFXN1-201ENST00000321442 TNFAIP3P21580 790 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 RPL13P26373 211 aaKnown RBP18.09■□□□□ 0.49
SFXN1-201ENST00000321442 CHRNA5P30532 468 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 PRPHP41219 470 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 ZBTB16Q05516 673 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 CUL4BQ13620 913 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 RABL6Q3YEC7 729 aaPredicted RBP18.09■□□□□ 0.49
SFXN1-201ENST00000321442 CLEC4GQ6UXB4 293 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 RDH13Q8NBN7 331 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 ALDH8A1Q9H2A2 487 aaPredicted RBP18.09■□□□□ 0.49
SFXN1-201ENST00000321442 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.09■□□□□ 0.49
SFXN1-201ENST00000321442 ITSN1Q15811 1721 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 ZNF609O15014 1411 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 CHMP2AO43633 222 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 FTCDO95954 541 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 PDCLQ13371 301 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 JCADQ9P266 1359 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 KRIT1O00522 736 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 PLEKHA8P1O95397 391 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 GUCY1A2P33402 732 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 ST3GAL1Q11201 340 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 EFCAB13Q8IY85 973 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 SMCR8Q8TEV9 937 aaPredicted RBP18.09■□□□□ 0.49
SFXN1-201ENST00000321442 SPATA31A5Q5VU36 1347 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 SPATA31A7Q8IWB4 1347 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 ATP2B4P23634 1241 aa18.09■□□□□ 0.49
SFXN1-201ENST00000321442 RIN2Q8WYP3 895 aaPredicted RBP18.09■□□□□ 0.49
SFXN1-201ENST00000321442 NHEJ1Q9H9Q4 299 aaPredicted RBP18.09■□□□□ 0.49
SFXN1-201ENST00000321442 BUB1BO60566 1050 aaPredicted RBP18.08■□□□□ 0.49
SFXN1-201ENST00000321442 E2F5Q15329 346 aa18.08■□□□□ 0.49
SFXN1-201ENST00000321442 DLGAP5Q15398 846 aa18.08■□□□□ 0.49
SFXN1-201ENST00000321442 ZNF658Q5TYW1 1059 aaPredicted RBP18.08■□□□□ 0.49
SFXN1-201ENST00000321442 MAEAQ7L5Y9 396 aa18.08■□□□□ 0.49
SFXN1-201ENST00000321442 ABHD10Q9NUJ1 306 aa18.08■□□□□ 0.49
SFXN1-201ENST00000321442 MYOM1P52179 1685 aa18.08■□□□□ 0.48
SFXN1-201ENST00000321442 ARHGAP23Q9P227 1491 aa18.08■□□□□ 0.48
SFXN1-201ENST00000321442 NEDD4P46934 1319 aa18.08■□□□□ 0.48
SFXN1-201ENST00000321442 USP42Q9H9J4 1324 aaKnown RBP18.08■□□□□ 0.48
SFXN1-201ENST00000321442 BAZ2BQ9UIF8 2168 aaKnown RBP18.08■□□□□ 0.48
SFXN1-201ENST00000321442 KLRF2D3W0D1 207 aa18.08■□□□□ 0.48
SFXN1-201ENST00000321442 ACTN4O43707 911 aaKnown RBP18.08■□□□□ 0.48
SFXN1-201ENST00000321442 KLRK1P26718 216 aa18.08■□□□□ 0.48
SFXN1-201ENST00000321442 VWA3BQ502W6 1294 aa18.08■□□□□ 0.48
SFXN1-201ENST00000321442 TCP11X2Q5H9J9 407 aa18.08■□□□□ 0.48
SFXN1-201ENST00000321442 LRRN4CLQ8ND94 238 aa18.08■□□□□ 0.48
SFXN1-201ENST00000321442 STMN4Q9H169 189 aaPredicted RBP18.08■□□□□ 0.48
SFXN1-201ENST00000321442 LLGL1Q15334 1064 aa18.08■□□□□ 0.48
SFXN1-201ENST00000321442 ARHGAP44Q17R89 818 aa18.08■□□□□ 0.48
SFXN1-201ENST00000321442 CACNA2D3Q8IZS8 1091 aa18.08■□□□□ 0.48
SFXN1-201ENST00000321442 FLOT1O75955 427 aa18.07■□□□□ 0.48
SFXN1-201ENST00000321442 OR52Z1P0C646 297 aa18.07■□□□□ 0.48
SFXN1-201ENST00000321442 EPB41P11171 864 aaKnown RBP18.07■□□□□ 0.48
SFXN1-201ENST00000321442 GGCXP38435 758 aa18.07■□□□□ 0.48
SFXN1-201ENST00000321442 EIF4A3P38919 411 aaKnown RBP18.07■□□□□ 0.48
SFXN1-201ENST00000321442 PLA2G4AP47712 749 aa18.07■□□□□ 0.48
SFXN1-201ENST00000321442 RFX5P48382 616 aaPredicted RBP18.07■□□□□ 0.48
SFXN1-201ENST00000321442 VPS72Q15906 364 aa18.07■□□□□ 0.48
SFXN1-201ENST00000321442 U2AF1L4Q8WU68 220 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms