RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 CNOT6LQ96LI5 555 aaKnown RBP18.25■□□□□ 0.51
PACS1-201ENST00000320580 NBPF3Q9H094 633 aa18.25■□□□□ 0.51
PACS1-201ENST00000320580 RAB17Q9H0T7 212 aa18.25■□□□□ 0.51
PACS1-201ENST00000320580 KDRP35968 1356 aa18.24■□□□□ 0.51
PACS1-201ENST00000320580 FLOT1O75955 427 aa18.24■□□□□ 0.51
PACS1-201ENST00000320580 PPP4R3AQ6IN85 833 aa18.24■□□□□ 0.51
PACS1-201ENST00000320580 GDAQ9Y2T3 454 aa18.24■□□□□ 0.51
PACS1-201ENST00000320580 ATP5DP30049 168 aa18.24■□□□□ 0.51
PACS1-201ENST00000320580 PTGDRQ13258 359 aa18.24■□□□□ 0.51
PACS1-201ENST00000320580 TMEM266Q2M3C6 531 aa18.24■□□□□ 0.51
PACS1-201ENST00000320580 PROSER3Q2NL68 480 aa18.24■□□□□ 0.51
PACS1-201ENST00000320580 NBPF6Q5VWK0 638 aa18.24■□□□□ 0.51
PACS1-201ENST00000320580 NBPF4Q96M43 638 aa18.24■□□□□ 0.51
PACS1-201ENST00000320580 UBXN6Q9BZV1 441 aa18.24■□□□□ 0.51
PACS1-201ENST00000320580 TMEM131LA2VDJ0 1609 aa18.24■□□□□ 0.51
PACS1-201ENST00000320580 A1BGP04217 495 aa18.24■□□□□ 0.51
PACS1-201ENST00000320580 RASSF2P50749 326 aa18.24■□□□□ 0.51
PACS1-201ENST00000320580 ASIC2Q16515 512 aa18.24■□□□□ 0.51
PACS1-201ENST00000320580 KIF6Q6ZMV9 814 aa18.24■□□□□ 0.51
PACS1-201ENST00000320580 PSMD1Q99460 953 aa18.24■□□□□ 0.51
PACS1-201ENST00000320580 DDX23Q9BUQ8 820 aaKnown RBP18.24■□□□□ 0.51
PACS1-201ENST00000320580 ATP2A2P16615 1042 aaKnown RBP18.23■□□□□ 0.51
PACS1-201ENST00000320580 RCSD1Q6JBY9 416 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 ABTB1Q969K4 478 aaPredicted RBP18.23■□□□□ 0.51
PACS1-201ENST00000320580 ADGRB1O14514 1584 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 NRXN1Q9ULB1 1477 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 PRDM1O75626 825 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 ZAP70P43403 619 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 NBPF5PQ86XG9 351 aaPredicted RBP18.23■□□□□ 0.51
PACS1-201ENST00000320580 AP1M1Q9BXS5 423 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 TEX13AQ9BXU3 409 aaPredicted RBP18.23■□□□□ 0.51
PACS1-201ENST00000320580 L3MBTL1Q9Y468 752 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 SETBP1Q9Y6X0 1596 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 SPATA31D1Q6ZQQ2 1576 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 EYA2O00167 538 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 CUL3Q13618 768 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 RETREG2Q8NC44 543 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 RAB34Q9BZG1 259 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 TRIM49BA6NDI0 452 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 STXBP3O00186 592 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 CTCFP49711 727 aaPredicted RBP18.23■□□□□ 0.51
PACS1-201ENST00000320580 AKAP4Q5JQC9 854 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 NUGGCQ68CJ6 796 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 ECT2Q9H8V3 914 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 EHD2Q9NZN4 543 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 SLAIN2Q9P270 581 aa18.23■□□□□ 0.51
PACS1-201ENST00000320580 M0R2C6 588 aa18.22■□□□□ 0.51
PACS1-201ENST00000320580 DDR1Q08345 913 aa18.22■□□□□ 0.51
PACS1-201ENST00000320580 SH2D4BQ5SQS7 431 aa18.22■□□□□ 0.51
PACS1-201ENST00000320580 DDX20Q9UHI6 824 aaKnown RBP18.22■□□□□ 0.51
PACS1-201ENST00000320580 OPHN1O60890 802 aa18.22■□□□□ 0.51
PACS1-201ENST00000320580 TBX2Q13207 712 aaPredicted RBP18.22■□□□□ 0.51
PACS1-201ENST00000320580 COL9A3Q14050 684 aaPredicted RBP18.22■□□□□ 0.51
PACS1-201ENST00000320580 DIXDC1Q155Q3 683 aa18.22■□□□□ 0.51
PACS1-201ENST00000320580 KCNV1Q6PIU1 500 aa18.22■□□□□ 0.51
PACS1-201ENST00000320580 MS4A14Q96JA4 679 aa18.22■□□□□ 0.51
PACS1-201ENST00000320580 KIF13AQ9H1H9 1805 aa18.22■□□□□ 0.51
PACS1-201ENST00000320580 CCNHP51946 323 aaPredicted RBP18.22■□□□□ 0.51
PACS1-201ENST00000320580 RAD23BP54727 409 aa18.22■□□□□ 0.51
PACS1-201ENST00000320580 METTL22Q9BUU2 404 aaPredicted RBP18.22■□□□□ 0.51
PACS1-201ENST00000320580 GNAT1P11488 350 aa18.21■□□□□ 0.51
PACS1-201ENST00000320580 ADCY1Q08828 1119 aa18.21■□□□□ 0.51
PACS1-201ENST00000320580 NBPF20Q3BBV1 942 aa18.21■□□□□ 0.51
PACS1-201ENST00000320580 OSBP2Q969R2 916 aa18.21■□□□□ 0.51
PACS1-201ENST00000320580 USP42Q9H9J4 1324 aaKnown RBP18.21■□□□□ 0.51
PACS1-201ENST00000320580 TXNDC9O14530 226 aa18.21■□□□□ 0.51
PACS1-201ENST00000320580 ZNF658Q5TYW1 1059 aaPredicted RBP18.21■□□□□ 0.51
PACS1-201ENST00000320580 LONP2Q86WA8 852 aa18.21■□□□□ 0.51
PACS1-201ENST00000320580 NAP1L3Q99457 506 aaPredicted RBP18.21■□□□□ 0.51
PACS1-201ENST00000320580 FOXP1Q9H334 677 aaPredicted RBP18.21■□□□□ 0.51
PACS1-201ENST00000320580 RBM12Q9NTZ6 932 aaKnown RBP18.21■□□□□ 0.51
PACS1-201ENST00000320580 SIGLEC1Q9BZZ2 1709 aa18.21■□□□□ 0.51
PACS1-201ENST00000320580 NEURL1BA8MQ27 555 aa18.21■□□□□ 0.51
PACS1-201ENST00000320580 LGALS16A8MUM7 142 aa18.21■□□□□ 0.51
PACS1-201ENST00000320580 MMP1P03956 469 aa18.21■□□□□ 0.51
PACS1-201ENST00000320580 SKIP12755 728 aa18.21■□□□□ 0.51
PACS1-201ENST00000320580 EXOSC10Q01780 885 aaKnown RBP18.21■□□□□ 0.51
PACS1-201ENST00000320580 KIF2BQ8N4N8 673 aa18.21■□□□□ 0.51
PACS1-201ENST00000320580 MRRFQ96E11 262 aaKnown RBP18.21■□□□□ 0.51
PACS1-201ENST00000320580 TAF1DQ9H5J8 278 aaPredicted RBP18.21■□□□□ 0.51
PACS1-201ENST00000320580 SH3TC1Q8TE82 1336 aa18.21■□□□□ 0.51
PACS1-201ENST00000320580 AATKQ6ZMQ8 1374 aa18.21■□□□□ 0.51
PACS1-201ENST00000320580 hCG_2014768A0A024R1R8 64 aa18.21■□□□□ 0.5
PACS1-201ENST00000320580 CCT8L1PA6NM43 557 aa18.21■□□□□ 0.5
PACS1-201ENST00000320580 MBD4O95243 580 aa18.21■□□□□ 0.5
PACS1-201ENST00000320580 PLTPP55058 493 aa18.21■□□□□ 0.5
PACS1-201ENST00000320580 LAMB3Q13751 1172 aa18.21■□□□□ 0.5
PACS1-201ENST00000320580 CNNM4Q6P4Q7 775 aa18.21■□□□□ 0.5
PACS1-201ENST00000320580 PARD3BQ8TEW8 1205 aa18.21■□□□□ 0.5
PACS1-201ENST00000320580 XAGE2Q96GT9 111 aa18.21■□□□□ 0.5
PACS1-201ENST00000320580 SMC6Q96SB8 1091 aa18.21■□□□□ 0.5
PACS1-201ENST00000320580 COPRSQ9NQ92 184 aa18.21■□□□□ 0.5
PACS1-201ENST00000320580 PAPOLBQ9NRJ5 636 aaKnown RBP18.21■□□□□ 0.5
PACS1-201ENST00000320580 MYBL2P10244 700 aa18.2■□□□□ 0.5
PACS1-201ENST00000320580 USPL1Q5W0Q7 1092 aa18.2■□□□□ 0.5
PACS1-201ENST00000320580 TEKT4Q8WW24 435 aa18.2■□□□□ 0.5
PACS1-201ENST00000320580 RIMS1Q86UR5 1692 aaKnown RBP18.2■□□□□ 0.5
PACS1-201ENST00000320580 ATP6V1G2O95670 118 aa18.2■□□□□ 0.5
PACS1-201ENST00000320580 MMGT1Q8N4V1 131 aa18.2■□□□□ 0.5
PACS1-201ENST00000320580 MIGA1Q8NAN2 632 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms