RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 FAM177A1Q8N128 213 aaPredicted RBP16■□□□□ 0.15
VRK3-201ENST00000316763 RIOX1Q9H6W3 641 aa16■□□□□ 0.15
VRK3-201ENST00000316763 SSC5DA1L4H1 1573 aa16■□□□□ 0.15
VRK3-201ENST00000316763 PHF20L1A8MW92 1017 aa16■□□□□ 0.15
VRK3-201ENST00000316763 ARHGAP6O43182 974 aa16■□□□□ 0.15
VRK3-201ENST00000316763 CAP2P40123 477 aa16■□□□□ 0.15
VRK3-201ENST00000316763 TXLNAP40222 546 aa16■□□□□ 0.15
VRK3-201ENST00000316763 ATP2B2Q01814 1243 aa16■□□□□ 0.15
VRK3-201ENST00000316763 DPYDQ12882 1025 aa16■□□□□ 0.15
VRK3-201ENST00000316763 TBX2Q13207 712 aaPredicted RBP16■□□□□ 0.15
VRK3-201ENST00000316763 GALNT17Q6IS24 598 aa16■□□□□ 0.15
VRK3-201ENST00000316763 HOMER1Q86YM7 354 aa16■□□□□ 0.15
VRK3-201ENST00000316763 TRMT44Q8IYL2 757 aaKnown RBP16■□□□□ 0.15
VRK3-201ENST00000316763 CCDC148Q8NFR7 591 aa16■□□□□ 0.15
VRK3-201ENST00000316763 CGNQ9P2M7 1197 aaKnown RBP16■□□□□ 0.15
VRK3-201ENST00000316763 ZBTB21Q9ULJ3 1066 aa16■□□□□ 0.15
VRK3-201ENST00000316763 PCDHA4Q9UN74 947 aa16■□□□□ 0.15
VRK3-201ENST00000316763 FZD1Q9UP38 647 aa16■□□□□ 0.15
VRK3-201ENST00000316763 MCM7P33993 719 aa15.99■□□□□ 0.15
VRK3-201ENST00000316763 LONP1P36776 959 aaKnown RBP15.99■□□□□ 0.15
VRK3-201ENST00000316763 NOM1Q5C9Z4 860 aaKnown RBP15.99■□□□□ 0.15
VRK3-201ENST00000316763 GPATCH4Q5T3I0 446 aaKnown RBP15.99■□□□□ 0.15
VRK3-201ENST00000316763 GMCL1P1Q8NEA9 526 aa15.99■□□□□ 0.15
VRK3-201ENST00000316763 HOOK2Q96ED9 719 aa15.99■□□□□ 0.15
VRK3-201ENST00000316763 ERO1AQ96HE7 468 aa15.99■□□□□ 0.15
VRK3-201ENST00000316763 CTAGE1Q96RT6 745 aa15.99■□□□□ 0.15
VRK3-201ENST00000316763 INTS13Q9NVM9 706 aa15.99■□□□□ 0.15
VRK3-201ENST00000316763 SYNRGQ9UMZ2 1314 aa15.98■□□□□ 0.15
VRK3-201ENST00000316763 WNT7AO00755 349 aa15.98■□□□□ 0.15
VRK3-201ENST00000316763 TOMM70O94826 608 aa15.98■□□□□ 0.15
VRK3-201ENST00000316763 SLU7O95391 586 aaKnown RBP15.98■□□□□ 0.15
VRK3-201ENST00000316763 PRKG1Q13976 671 aa15.98■□□□□ 0.15
VRK3-201ENST00000316763 DCAF15Q66K64 600 aa15.98■□□□□ 0.15
VRK3-201ENST00000316763 DCAF4Q8WV16 495 aa15.98■□□□□ 0.15
VRK3-201ENST00000316763 CCDC194A0A1B0GVG4 234 aa15.98■□□□□ 0.15
VRK3-201ENST00000316763 FILIP1LQ4L180 1135 aa15.98■□□□□ 0.15
VRK3-201ENST00000316763 HSP90AA4PQ58FG1 418 aa15.98■□□□□ 0.15
VRK3-201ENST00000316763 BAG1Q99933 345 aaPredicted RBP15.98■□□□□ 0.15
VRK3-201ENST00000316763 CPVLQ9H3G5 476 aa15.98■□□□□ 0.15
VRK3-201ENST00000316763 SAMSN1Q9NSI8 373 aaKnown RBP15.98■□□□□ 0.15
VRK3-201ENST00000316763 FRMPD2Q68DX3 1309 aaPredicted RBP15.97■□□□□ 0.15
VRK3-201ENST00000316763 TRPM7Q96QT4 1865 aa15.97■□□□□ 0.15
VRK3-201ENST00000316763 A0A1B0GTH6 734 aa15.97■□□□□ 0.15
VRK3-201ENST00000316763 A0A1W2PRG0 241 aa15.97■□□□□ 0.15
VRK3-201ENST00000316763 GOLGA6L9A6NEM1 432 aa15.97■□□□□ 0.15
VRK3-201ENST00000316763 GTPBP6O43824 516 aaPredicted RBP15.97■□□□□ 0.15
VRK3-201ENST00000316763 STX10O60499 249 aa15.97■□□□□ 0.15
VRK3-201ENST00000316763 USP2O75604 605 aaPredicted RBP15.97■□□□□ 0.15
VRK3-201ENST00000316763 NF2P35240 595 aa15.97■□□□□ 0.15
VRK3-201ENST00000316763 CUL4BQ13620 913 aa15.97■□□□□ 0.15
VRK3-201ENST00000316763 NR1I3Q14994 352 aa15.97■□□□□ 0.15
VRK3-201ENST00000316763 KLHL10Q6JEL2 608 aa15.97■□□□□ 0.15
VRK3-201ENST00000316763 SYT10Q6XYQ8 523 aa15.97■□□□□ 0.15
VRK3-201ENST00000316763 SMC1BQ8NDV3 1235 aa15.97■□□□□ 0.15
VRK3-201ENST00000316763 GMCL1Q96IK5 515 aa15.97■□□□□ 0.15
VRK3-201ENST00000316763 ZNF341Q9BYN7 854 aa15.97■□□□□ 0.15
VRK3-201ENST00000316763 RMND1Q9NWS8 449 aa15.97■□□□□ 0.15
VRK3-201ENST00000316763 F5H6K3 240 aa15.96■□□□□ 0.15
VRK3-201ENST00000316763 ETF1P62495 437 aaKnown RBP15.96■□□□□ 0.15
VRK3-201ENST00000316763 KLRC3Q07444 240 aa15.96■□□□□ 0.15
VRK3-201ENST00000316763 E2F4Q16254 413 aa15.96■□□□□ 0.15
VRK3-201ENST00000316763 SLFN13Q68D06 897 aa15.96■□□□□ 0.15
VRK3-201ENST00000316763 DAGLBQ8NCG7 672 aa15.96■□□□□ 0.15
VRK3-201ENST00000316763 RBM46Q8TBY0 533 aaKnown RBP15.96■□□□□ 0.15
VRK3-201ENST00000316763 RRP36Q96EU6 259 aaKnown RBP15.96■□□□□ 0.15
VRK3-201ENST00000316763 ARID3AQ99856 593 aa15.96■□□□□ 0.15
VRK3-201ENST00000316763 UBA5Q9GZZ9 404 aa15.96■□□□□ 0.15
VRK3-201ENST00000316763 ZNF408Q9H9D4 720 aa15.96■□□□□ 0.15
VRK3-201ENST00000316763 GINM1Q9NU53 330 aa15.96■□□□□ 0.15
VRK3-201ENST00000316763 BARHL2Q9NY43 387 aa15.96■□□□□ 0.15
VRK3-201ENST00000316763 TMX2Q9Y320 296 aa15.96■□□□□ 0.15
VRK3-201ENST00000316763 MYH4Q9Y623 1939 aa15.96■□□□□ 0.15
VRK3-201ENST00000316763 PHLPP2Q6ZVD8 1323 aa15.96■□□□□ 0.15
VRK3-201ENST00000316763 PPP1R12BO60237 982 aaPredicted RBP15.96■□□□□ 0.14
VRK3-201ENST00000316763 ASNSP08243 561 aa15.96■□□□□ 0.14
VRK3-201ENST00000316763 WWC2Q6AWC2 1192 aa15.96■□□□□ 0.14
VRK3-201ENST00000316763 GPKOWQ92917 476 aaPredicted RBP eCLIP15.96■□□□□ 0.14
VRK3-201ENST00000316763 MED15Q96RN5 788 aa15.96■□□□□ 0.14
VRK3-201ENST00000316763 ARHGEF10LQ9HCE6 1279 aa15.96■□□□□ 0.14
VRK3-201ENST00000316763 GPCPD1Q9NPB8 672 aa15.96■□□□□ 0.14
VRK3-201ENST00000316763 ZNF112Q9UJU3 913 aa15.96■□□□□ 0.14
VRK3-201ENST00000316763 ZNF215Q9UL58 517 aaPredicted RBP15.96■□□□□ 0.14
VRK3-201ENST00000316763 ATAD5Q96QE3 1844 aa15.95■□□□□ 0.14
VRK3-201ENST00000316763 PPP1R3GB7ZBB8 358 aa15.95■□□□□ 0.14
VRK3-201ENST00000316763 STXBP3O00186 592 aa15.95■□□□□ 0.14
VRK3-201ENST00000316763 CTNND1O60716 968 aaKnown RBP15.95■□□□□ 0.14
VRK3-201ENST00000316763 NDUFB10O96000 172 aa15.95■□□□□ 0.14
VRK3-201ENST00000316763 SLC1A4P43007 532 aa15.95■□□□□ 0.14
VRK3-201ENST00000316763 TTBK2Q6IQ55 1244 aa15.95■□□□□ 0.14
VRK3-201ENST00000316763 TYW1BQ6NUM6 668 aa15.95■□□□□ 0.14
VRK3-201ENST00000316763 PDXDC2PQ6P474 469 aa15.95■□□□□ 0.14
VRK3-201ENST00000316763 MOB2Q70IA6 237 aa15.95■□□□□ 0.14
VRK3-201ENST00000316763 PPFIBP1Q86W92 1011 aa15.95■□□□□ 0.14
VRK3-201ENST00000316763 CCDC12Q8WUD4 166 aaPredicted RBP15.95■□□□□ 0.14
VRK3-201ENST00000316763 KLRG1Q96E93 195 aa15.95■□□□□ 0.14
VRK3-201ENST00000316763 MTMR8Q96EF0 704 aa15.95■□□□□ 0.14
VRK3-201ENST00000316763 L2HGDHQ9H9P8 463 aa15.95■□□□□ 0.14
VRK3-201ENST00000316763 CELF2O95319 508 aaKnown RBP15.94■□□□□ 0.14
VRK3-201ENST00000316763 CD44P16070 742 aaKnown RBP15.94■□□□□ 0.14
VRK3-201ENST00000316763 INPP5BP32019 993 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms