RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 MRPL44Q9H9J2 332 aaKnown RBP22.42■■□□□ 1.18
CXCL16-201ENST00000293778 USP17L10C9JJH3 530 aa22.41■■□□□ 1.18
CXCL16-201ENST00000293778 ZBTB5O15062 677 aa22.41■■□□□ 1.18
CXCL16-201ENST00000293778 CACNB3P54284 484 aa22.41■■□□□ 1.18
CXCL16-201ENST00000293778 UBE2SQ16763 222 aa22.41■■□□□ 1.18
CXCL16-201ENST00000293778 LRRN4CLQ8ND94 238 aa22.41■■□□□ 1.18
CXCL16-201ENST00000293778 NOC3LQ8WTT2 800 aaKnown RBP22.41■■□□□ 1.18
CXCL16-201ENST00000293778 CUL5Q93034 780 aa22.41■■□□□ 1.18
CXCL16-201ENST00000293778 WDR24Q96S15 920 aa22.41■■□□□ 1.18
CXCL16-201ENST00000293778 NUP88Q99567 741 aaPredicted RBP22.41■■□□□ 1.18
CXCL16-201ENST00000293778 GTPBP4Q9BZE4 634 aaKnown RBP22.41■■□□□ 1.18
CXCL16-201ENST00000293778 DHX36Q9H2U1 1008 aaKnown RBP22.41■■□□□ 1.18
CXCL16-201ENST00000293778 FKBP1AP62942 108 aaKnown RBP22.41■■□□□ 1.18
CXCL16-201ENST00000293778 TCP10Q12799 353 aa22.41■■□□□ 1.18
CXCL16-201ENST00000293778 GRB10Q13322 594 aa22.41■■□□□ 1.18
CXCL16-201ENST00000293778 ZNF397Q8NF99 534 aaPredicted RBP22.41■■□□□ 1.18
CXCL16-201ENST00000293778 RAB34Q9BZG1 259 aa22.41■■□□□ 1.18
CXCL16-201ENST00000293778 ABHD10Q9NUJ1 306 aa22.41■■□□□ 1.18
CXCL16-201ENST00000293778 MAGEC2Q9UBF1 373 aaPredicted RBP22.41■■□□□ 1.18
CXCL16-201ENST00000293778 PCDHAC2Q9Y5I4 1007 aa22.41■■□□□ 1.18
CXCL16-201ENST00000293778 MYH4Q9Y623 1939 aa22.4■■□□□ 1.18
CXCL16-201ENST00000293778 CLK2P49760 499 aaKnown RBP22.4■■□□□ 1.18
CXCL16-201ENST00000293778 RBM5P52756 815 aaKnown RBP eCLIP22.4■■□□□ 1.18
CXCL16-201ENST00000293778 MRPL12P52815 198 aaKnown RBP22.4■■□□□ 1.18
CXCL16-201ENST00000293778 DACT2Q5SW24 774 aa22.4■■□□□ 1.18
CXCL16-201ENST00000293778 MTMR8Q96EF0 704 aa22.4■■□□□ 1.18
CXCL16-201ENST00000293778 ZMYND15Q9H091 742 aa22.4■■□□□ 1.18
CXCL16-201ENST00000293778 STK17AQ9UEE5 414 aa22.4■■□□□ 1.18
CXCL16-201ENST00000293778 LGALS16A8MUM7 142 aa22.39■■□□□ 1.18
CXCL16-201ENST00000293778 H0YIN7 160 aa22.39■■□□□ 1.18
CXCL16-201ENST00000293778 ECE2O60344 883 aa22.39■■□□□ 1.18
CXCL16-201ENST00000293778 PPP1R2P41236 205 aa22.39■■□□□ 1.18
CXCL16-201ENST00000293778 PDIA5Q14554 519 aa22.39■■□□□ 1.18
CXCL16-201ENST00000293778 STYK1Q6J9G0 422 aa22.39■■□□□ 1.18
CXCL16-201ENST00000293778 SV2BQ7L1I2 683 aa22.39■■□□□ 1.18
CXCL16-201ENST00000293778 P2RX5Q93086 422 aa22.39■■□□□ 1.18
CXCL16-201ENST00000293778 CDK5RAP3Q96JB5 506 aa22.39■■□□□ 1.18
CXCL16-201ENST00000293778 BICDL2A1A5D9 508 aa22.39■■□□□ 1.17
CXCL16-201ENST00000293778 FAM196BA6NMK8 535 aa22.39■■□□□ 1.17
CXCL16-201ENST00000293778 CCNE1P24864 410 aa22.39■■□□□ 1.17
CXCL16-201ENST00000293778 HDLBPQ00341 1268 aaKnown RBP22.39■■□□□ 1.17
CXCL16-201ENST00000293778 STK4Q13043 487 aa22.39■■□□□ 1.17
CXCL16-201ENST00000293778 ERCC6LQ2NKX8 1250 aa22.39■■□□□ 1.17
CXCL16-201ENST00000293778 PPP4R3AQ6IN85 833 aa22.39■■□□□ 1.17
CXCL16-201ENST00000293778 TMTC1Q8IUR5 882 aa22.39■■□□□ 1.17
CXCL16-201ENST00000293778 CSGALNACT2Q8N6G5 542 aa22.39■■□□□ 1.17
CXCL16-201ENST00000293778 MB21D1Q8N884 522 aa22.39■■□□□ 1.17
CXCL16-201ENST00000293778 PNMA5Q96PV4 448 aa22.39■■□□□ 1.17
CXCL16-201ENST00000293778 DUSP9Q99956 384 aaKnown RBP22.39■■□□□ 1.17
CXCL16-201ENST00000293778 DDTLA6NHG4 134 aaPredicted RBP22.38■■□□□ 1.17
CXCL16-201ENST00000293778 RNF225M0QZC1 329 aaPredicted RBP22.38■■□□□ 1.17
CXCL16-201ENST00000293778 IDI2Q9BXS1 227 aa22.38■■□□□ 1.17
CXCL16-201ENST00000293778 BLOC1S4Q9NUP1 217 aa22.38■■□□□ 1.17
CXCL16-201ENST00000293778 PI4KBQ9UBF8 816 aa22.38■■□□□ 1.17
CXCL16-201ENST00000293778 FAM198AQ9UFP1 575 aa22.38■■□□□ 1.17
CXCL16-201ENST00000293778 FCER1AP12319 257 aa22.38■■□□□ 1.17
CXCL16-201ENST00000293778 EEF2P13639 858 aaKnown RBP22.38■■□□□ 1.17
CXCL16-201ENST00000293778 CERKLQ49MI3 558 aaPredicted RBP22.38■■□□□ 1.17
CXCL16-201ENST00000293778 CNNM4Q6P4Q7 775 aa22.38■■□□□ 1.17
CXCL16-201ENST00000293778 ZSCAN29Q8IWY8 852 aaPredicted RBP22.38■■□□□ 1.17
CXCL16-201ENST00000293778 MNS1Q8NEH6 495 aa22.38■■□□□ 1.17
CXCL16-201ENST00000293778 PSTPIP2Q9H939 334 aa22.38■■□□□ 1.17
CXCL16-201ENST00000293778 ZNF219Q9P2Y4 722 aaPredicted RBP22.38■■□□□ 1.17
CXCL16-201ENST00000293778 SIPA1L1O43166 1804 aa22.37■■□□□ 1.17
CXCL16-201ENST00000293778 A0A1W2PQC6 194 aa22.37■■□□□ 1.17
CXCL16-201ENST00000293778 POTEMA6NI47 508 aa22.37■■□□□ 1.17
CXCL16-201ENST00000293778 PES1O00541 588 aaKnown RBP22.37■■□□□ 1.17
CXCL16-201ENST00000293778 RAD21O60216 631 aa22.37■■□□□ 1.17
CXCL16-201ENST00000293778 KRT9P35527 623 aa22.37■■□□□ 1.17
CXCL16-201ENST00000293778 ZNF507Q8TCN5 953 aa22.37■■□□□ 1.17
CXCL16-201ENST00000293778 LARP4BQ92615 738 aaKnown RBP22.37■■□□□ 1.17
CXCL16-201ENST00000293778 MKL1Q969V6 931 aa22.37■■□□□ 1.17
CXCL16-201ENST00000293778 KIFC2Q96AC6 838 aa22.37■■□□□ 1.17
CXCL16-201ENST00000293778 FEZ1Q99689 392 aa22.37■■□□□ 1.17
CXCL16-201ENST00000293778 TRIM34Q9BYJ4 488 aa22.37■■□□□ 1.17
CXCL16-201ENST00000293778 KANSL2Q9H9L4 492 aa22.37■■□□□ 1.17
CXCL16-201ENST00000293778 LZTFL1Q9NQ48 299 aa22.37■■□□□ 1.17
CXCL16-201ENST00000293778 NYAP2Q9P242 653 aa22.37■■□□□ 1.17
CXCL16-201ENST00000293778 DDX25Q9UHL0 483 aaKnown RBP22.37■■□□□ 1.17
CXCL16-201ENST00000293778 MCM6Q14566 821 aa22.37■■□□□ 1.17
CXCL16-201ENST00000293778 KRT79Q5XKE5 535 aa22.37■■□□□ 1.17
CXCL16-201ENST00000293778 ANKRD40Q6AI12 368 aa22.37■■□□□ 1.17
CXCL16-201ENST00000293778 CYP26C1Q6V0L0 522 aa22.37■■□□□ 1.17
CXCL16-201ENST00000293778 SNX29Q8TEQ0 813 aa22.37■■□□□ 1.17
CXCL16-201ENST00000293778 ERVK-24P63145 666 aa22.36■■□□□ 1.17
CXCL16-201ENST00000293778 COBLL1Q53SF7 1204 aa22.36■■□□□ 1.17
CXCL16-201ENST00000293778 FBXO38Q6PIJ6 1188 aa22.36■■□□□ 1.17
CXCL16-201ENST00000293778 SH3BP5LQ7L8J4 393 aa22.36■■□□□ 1.17
CXCL16-201ENST00000293778 DCAF4Q8WV16 495 aa22.36■■□□□ 1.17
CXCL16-201ENST00000293778 MYMKA6NI61 221 aa22.35■■□□□ 1.17
CXCL16-201ENST00000293778 SLC1A4P43007 532 aa22.35■■□□□ 1.17
CXCL16-201ENST00000293778 MAP3K9P80192 1104 aa22.35■■□□□ 1.17
CXCL16-201ENST00000293778 SHROOM1Q2M3G4 852 aaPredicted RBP22.35■■□□□ 1.17
CXCL16-201ENST00000293778 FAM114A1Q8IWE2 563 aa22.35■■□□□ 1.17
CXCL16-201ENST00000293778 CARD6Q9BX69 1037 aa22.35■■□□□ 1.17
CXCL16-201ENST00000293778 SCN9AQ15858 1988 aa22.35■■□□□ 1.17
CXCL16-201ENST00000293778 GCFC2P16383 781 aaKnown RBP22.35■■□□□ 1.17
CXCL16-201ENST00000293778 DNM2P50570 870 aa22.35■■□□□ 1.17
CXCL16-201ENST00000293778 QRICH1Q2TAL8 776 aa22.35■■□□□ 1.17
CXCL16-201ENST00000293778 SLFN13Q68D06 897 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms