RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 IGKV6D-41A0A0C4DH26 115 aa28.08■■■□□ 2.09
ROM1-201ENST00000278833 SRGNP10124 158 aa28.08■■■□□ 2.09
ROM1-201ENST00000278833 AMPD3Q01432 767 aa28.08■■■□□ 2.09
ROM1-201ENST00000278833 GABPAQ06546 454 aa28.08■■■□□ 2.09
ROM1-201ENST00000278833 OR8K1Q8NGG5 319 aa28.08■■■□□ 2.09
ROM1-201ENST00000278833 NUP58Q9BVL2 599 aa28.08■■■□□ 2.09
ROM1-201ENST00000278833 TRIM49BA6NDI0 452 aa28.08■■■□□ 2.09
ROM1-201ENST00000278833 GOLGA8HP0CJ92 632 aa28.08■■■□□ 2.09
ROM1-201ENST00000278833 PMS1P54277 932 aaKnown RBP28.08■■■□□ 2.09
ROM1-201ENST00000278833 MEA1Q16626 185 aa28.08■■■□□ 2.09
ROM1-201ENST00000278833 MFSD14BQ5SR56 506 aa28.08■■■□□ 2.09
ROM1-201ENST00000278833 P2RX5Q93086 422 aa28.08■■■□□ 2.09
ROM1-201ENST00000278833 TRIM47Q96LD4 638 aa28.08■■■□□ 2.09
ROM1-201ENST00000278833 GPR101Q96P66 508 aaPredicted RBP28.08■■■□□ 2.09
ROM1-201ENST00000278833 DUSP9Q99956 384 aaKnown RBP28.08■■■□□ 2.09
ROM1-201ENST00000278833 UBXN6Q9BZV1 441 aa28.08■■■□□ 2.09
ROM1-201ENST00000278833 MAGEC2Q9UBF1 373 aaPredicted RBP28.08■■■□□ 2.09
ROM1-201ENST00000278833 STK17AQ9UEE5 414 aa28.08■■■□□ 2.09
ROM1-201ENST00000278833 CTAGE9A4FU28 777 aa28.07■■■□□ 2.08
ROM1-201ENST00000278833 RNF225M0QZC1 329 aaPredicted RBP28.07■■■□□ 2.08
ROM1-201ENST00000278833 FXR2P51116 673 aaKnown RBP eCLIP28.07■■■□□ 2.08
ROM1-201ENST00000278833 TGFB2P61812 414 aa28.07■■■□□ 2.08
ROM1-201ENST00000278833 TERF2Q15554 542 aa28.07■■■□□ 2.08
ROM1-201ENST00000278833 CC2D1AQ6P1N0 951 aaPredicted RBP28.07■■■□□ 2.08
ROM1-201ENST00000278833 CNNM4Q6P4Q7 775 aa28.07■■■□□ 2.08
ROM1-201ENST00000278833 FOXR2Q6PJQ5 311 aa28.07■■■□□ 2.08
ROM1-201ENST00000278833 REXO1Q8N1G1 1221 aaKnown RBP28.07■■■□□ 2.08
ROM1-201ENST00000278833 TBC1D16Q8TBP0 767 aa28.07■■■□□ 2.08
ROM1-201ENST00000278833 IRX2Q9BZI1 471 aaPredicted RBP28.07■■■□□ 2.08
ROM1-201ENST00000278833 TTYH3Q9C0H2 523 aa28.07■■■□□ 2.08
ROM1-201ENST00000278833 BRD3Q15059 726 aa28.06■■■□□ 2.08
ROM1-201ENST00000278833 FIGNQ5HY92 759 aa28.06■■■□□ 2.08
ROM1-201ENST00000278833 ACRBPQ8NEB7 543 aa28.06■■■□□ 2.08
ROM1-201ENST00000278833 MTMR9Q96QG7 549 aa28.06■■■□□ 2.08
ROM1-201ENST00000278833 CCDC151A5D8V7 595 aa28.06■■■□□ 2.08
ROM1-201ENST00000278833 CCNT1O60563 726 aaKnown RBP28.06■■■□□ 2.08
ROM1-201ENST00000278833 COBLO75128 1261 aa28.06■■■□□ 2.08
ROM1-201ENST00000278833 PDHBP11177 359 aa28.06■■■□□ 2.08
ROM1-201ENST00000278833 CHRNA5P30532 468 aa28.06■■■□□ 2.08
ROM1-201ENST00000278833 PDE6BP35913 854 aa28.06■■■□□ 2.08
ROM1-201ENST00000278833 WHAMMP3Q1A5X7 153 aa28.06■■■□□ 2.08
ROM1-201ENST00000278833 ZNF569Q5MCW4 686 aa28.06■■■□□ 2.08
ROM1-201ENST00000278833 MSANTD4Q8NCY6 345 aa28.06■■■□□ 2.08
ROM1-201ENST00000278833 NAPGQ99747 312 aaPredicted RBP28.06■■■□□ 2.08
ROM1-201ENST00000278833 MMTAG2Q9BU76 263 aaKnown RBP28.06■■■□□ 2.08
ROM1-201ENST00000278833 EXOC1Q9NV70 894 aa28.06■■■□□ 2.08
ROM1-201ENST00000278833 ABCB11O95342 1321 aa28.05■■■□□ 2.08
ROM1-201ENST00000278833 PLA2G4AP47712 749 aa28.05■■■□□ 2.08
ROM1-201ENST00000278833 CHMP4BP1P59074 171 aa28.05■■■□□ 2.08
ROM1-201ENST00000278833 LETM2Q2VYF4 491 aa28.05■■■□□ 2.08
ROM1-201ENST00000278833 TEX35Q5T0J7 233 aa28.05■■■□□ 2.08
ROM1-201ENST00000278833 USP17L2Q6R6M4 530 aa28.05■■■□□ 2.08
ROM1-201ENST00000278833 LUC7L2Q9Y383 392 aaKnown RBP28.05■■■□□ 2.08
ROM1-201ENST00000278833 EPN1Q9Y6I3 576 aaPredicted RBP28.05■■■□□ 2.08
ROM1-201ENST00000278833 TTC26A0AVF1 554 aa28.04■■■□□ 2.08
ROM1-201ENST00000278833 NDUFA10O95299 355 aa28.04■■■□□ 2.08
ROM1-201ENST00000278833 DPEP1P16444 411 aa28.04■■■□□ 2.08
ROM1-201ENST00000278833 ZSCAN29Q8IWY8 852 aaPredicted RBP28.04■■■□□ 2.08
ROM1-201ENST00000278833 SLC35F6Q8N357 371 aa28.04■■■□□ 2.08
ROM1-201ENST00000278833 PIGSQ96S52 555 aa28.04■■■□□ 2.08
ROM1-201ENST00000278833 MTMR4Q9NYA4 1195 aa28.04■■■□□ 2.08
ROM1-201ENST00000278833 MAPK8IP1Q9UQF2 711 aa28.04■■■□□ 2.08
ROM1-201ENST00000278833 DAGLAQ9Y4D2 1042 aa28.04■■■□□ 2.08
ROM1-201ENST00000278833 TBCKQ8TEA7 893 aa28.04■■■□□ 2.08
ROM1-201ENST00000278833 HNRNPLLQ8WVV9 542 aaKnown RBP28.04■■■□□ 2.08
ROM1-201ENST00000278833 CALML4Q96GE6 196 aa28.04■■■□□ 2.08
ROM1-201ENST00000278833 HAUS4Q9H6D7 363 aa28.04■■■□□ 2.08
ROM1-201ENST00000278833 POLLQ9UGP5 575 aa28.04■■■□□ 2.08
ROM1-201ENST00000278833 RAB21Q9UL25 225 aa28.04■■■□□ 2.08
ROM1-201ENST00000278833 A0A0U1RQJ8 604 aa28.03■■■□□ 2.08
ROM1-201ENST00000278833 A0A1W2PQJ5 194 aa28.03■■■□□ 2.08
ROM1-201ENST00000278833 KCNA3P22001 575 aa28.03■■■□□ 2.08
ROM1-201ENST00000278833 CDK17Q00537 523 aa28.03■■■□□ 2.08
ROM1-201ENST00000278833 MSL3Q8N5Y2 521 aaKnown RBP28.03■■■□□ 2.08
ROM1-201ENST00000278833 ATRIPQ8WXE1 791 aa28.03■■■□□ 2.08
ROM1-201ENST00000278833 SWAP70Q9UH65 585 aa28.03■■■□□ 2.08
ROM1-201ENST00000278833 PVALEFA0A1B0GWK0 134 aa28.02■■■□□ 2.08
ROM1-201ENST00000278833 TBC1D8O95759 1140 aa28.02■■■□□ 2.08
ROM1-201ENST00000278833 PDE4DQ08499 809 aa28.02■■■□□ 2.08
ROM1-201ENST00000278833 C2CD5Q86YS7 1000 aa28.02■■■□□ 2.08
ROM1-201ENST00000278833 CSGALNACT2Q8N6G5 542 aa28.02■■■□□ 2.08
ROM1-201ENST00000278833 ERGIC2Q96RQ1 377 aa28.02■■■□□ 2.08
ROM1-201ENST00000278833 PARD6BQ9BYG5 372 aa28.02■■■□□ 2.08
ROM1-201ENST00000278833 REXO2Q9Y3B8 237 aaKnown RBP28.02■■■□□ 2.08
ROM1-201ENST00000278833 H0YIN7 160 aa28.02■■■□□ 2.08
ROM1-201ENST00000278833 TUBBP07437 444 aa28.02■■■□□ 2.08
ROM1-201ENST00000278833 AMPD2Q01433 879 aa28.02■■■□□ 2.08
ROM1-201ENST00000278833 TUBGCP2Q9BSJ2 902 aa28.02■■■□□ 2.08
ROM1-201ENST00000278833 USP17L5A8MUK1 530 aa28.01■■■□□ 2.07
ROM1-201ENST00000278833 PDIA5Q14554 519 aa28.01■■■□□ 2.07
ROM1-201ENST00000278833 KIF4BQ2VIQ3 1234 aa28.01■■■□□ 2.07
ROM1-201ENST00000278833 COA1Q9GZY4 146 aa28.01■■■□□ 2.07
ROM1-201ENST00000278833 ARFGAP3Q9NP61 516 aa28.01■■■□□ 2.07
ROM1-201ENST00000278833 PSMD14O00487 310 aa28■■■□□ 2.07
ROM1-201ENST00000278833 ADCY7P51828 1080 aa28■■■□□ 2.07
ROM1-201ENST00000278833 ASIC1P78348 528 aa28■■■□□ 2.07
ROM1-201ENST00000278833 SP8Q8IXZ3 490 aa28■■■□□ 2.07
ROM1-201ENST00000278833 CPVLQ9H3G5 476 aa28■■■□□ 2.07
ROM1-201ENST00000278833 CENPPQ6IPU0 288 aa28■■■□□ 2.07
ROM1-201ENST00000278833 WDR59Q6PJI9 974 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms