RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 TUBBP07437 444 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 PTPREP23469 700 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 ARHGAP25P42331 645 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 AMPD2Q01433 879 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 NFIAQ12857 509 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 ZNF174Q15697 407 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 TMTC3Q6ZXV5 915 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 ZFPM1Q8IX07 1006 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 ELOA2Q8IYF1 753 aaPredicted RBP17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 LARGE2Q8N3Y3 721 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CSRNP2Q9H175 543 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 VIPAS39Q9H9C1 493 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 DDX4Q9NQI0 724 aaKnown RBP17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 ARPP21Q9UBL0 812 aaPredicted RBP17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 LRRC37AA6NMS7 1700 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CCDC189A1A4V9 331 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 ORC4O43929 436 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 XBP1P17861 261 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 RCAN1P53805 252 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 RHBDL3P58872 404 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 SATB1Q01826 763 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 RCSD1Q6JBY9 416 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 PHF20Q9BVI0 1012 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 IL17RBQ9NRM6 502 aa17.82■□□□□ 0.44
MAP1LC3B-201ENST00000268607 PDS5AQ29RF7 1337 aaKnown RBP17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 FAM196BA6NMK8 535 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 ZMYND10O75800 440 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CD44P16070 742 aaKnown RBP17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 ERCC5P28715 1186 aaPredicted RBP17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 KRT2P35908 639 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 SLF1Q9BQI6 1058 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 MKNK2Q9HBH9 465 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 PIM2Q9P1W9 311 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 ADAMTSL1Q8N6G6 1762 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CCDC88AQ3V6T2 1871 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 SHTN1A0MZ66 631 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 ENC1O14682 589 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 COBLO75128 1261 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 BAG3O95817 575 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CDC25AP30304 524 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 GGCXP38435 758 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 C12orf60Q5U649 245 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CNGA4Q8IV77 575 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 STAG2Q8N3U4 1231 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 TRIML1Q8N9V2 468 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 EPSTI1Q96J88 318 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 HDAC6Q9UBN7 1215 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 TRIM10Q9UDY6 481 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 PCNTO95613 3336 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 MYH6P13533 1939 aa17.81■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CASP1P29466 404 aa17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 USP14P54578 494 aa17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 SPATA1Q5VX52 437 aa17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 SMYD4Q8IYR2 804 aaPredicted RBP17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 RBM28Q9NW13 759 aaKnown RBP17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 FAM205AQ6ZU69 1335 aa17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CNTNAP5Q8WYK1 1306 aa17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 TRIM75PA6NK02 468 aa17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 RNF225M0QZC1 329 aaPredicted RBP17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 EBAG9O00559 213 aa17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 SCP2P22307 547 aa17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CCT6AP40227 531 aaKnown RBP17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 USP8P40818 1118 aa17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 PTGER2P43116 358 aa17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 STIM1Q13586 685 aa17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 PPP2R5BQ15173 497 aa17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 PODNQ7Z5L7 613 aa17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 GSPT2Q8IYD1 628 aaKnown RBP17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 USP40Q9NVE5 1235 aa17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 GUCA1BQ9UMX6 200 aa17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 SYNRGQ9UMZ2 1314 aa17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 ZC3H4Q9UPT8 1303 aaKnown RBP17.8■□□□□ 0.44
MAP1LC3B-201ENST00000268607 GPR75-ASB3A0A0A6YYF3 556 aa17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 ACTN4O43707 911 aaKnown RBP17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 NPY5RQ15761 445 aa17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 SBK1Q52WX2 424 aa17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 DACT2Q5SW24 774 aa17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 GPKOWQ92917 476 aaPredicted RBP eCLIP17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 EHD4Q9H223 541 aa17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 KAT14Q9H8E8 782 aa17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 COL4A5P29400 1685 aa17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 SRGAP2O75044 1071 aa17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 DDAH1O94760 285 aa17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CALM1P0DP23 149 aa17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CALM2P0DP24 149 aa17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CALM3P0DP25 149 aa17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 PCP11498 1178 aaKnown RBP17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 AFMP43652 599 aa17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 ILDR2Q71H61 639 aa17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 TMTC1Q8IUR5 882 aa17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 TBC1D22AQ8WUA7 517 aa17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 MMS19Q96T76 1030 aa17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 STX8Q9UNK0 236 aa17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 SRPRBQ9Y5M8 271 aaKnown RBP17.79■□□□□ 0.44
MAP1LC3B-201ENST00000268607 NLRP5P59047 1200 aa17.78■□□□□ 0.44
MAP1LC3B-201ENST00000268607 GSTO1P78417 241 aa17.78■□□□□ 0.44
MAP1LC3B-201ENST00000268607 RASSF7Q02833 373 aa17.78■□□□□ 0.44
MAP1LC3B-201ENST00000268607 FILIP1LQ4L180 1135 aa17.78■□□□□ 0.44
MAP1LC3B-201ENST00000268607 PIK3AP1Q6ZUJ8 805 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms