RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 ADCY1Q08828 1119 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 UBE2SQ16763 222 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 ARHGAP45Q92619 1136 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 POLR3EQ9NVU0 708 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 GOLGA8SH3BPF8 625 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 BMP3P12645 472 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 TAF1CQ15572 869 aaPredicted RBP17.35■□□□□ 0.37
SHANK3-201ENST00000262795 SH2D4BQ5SQS7 431 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 WHAMMQ8TF30 809 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 TTC25Q96NG3 672 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 NKIRAS1Q9NYS0 192 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 CCDC85CA6NKD9 419 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 RRAGAQ7L523 313 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 CPLX4Q7Z7G2 160 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 RFX6Q8HWS3 928 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 SFMBT1Q9UHJ3 866 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 RABGAP1Q9Y3P9 1069 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 IL13P35225 146 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 TYRO3Q06418 890 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 RBBP5Q15291 538 aaKnown RBP17.35■□□□□ 0.37
SHANK3-201ENST00000262795 AKR1B15C9JRZ8 316 aaPredicted RBP17.35■□□□□ 0.37
SHANK3-201ENST00000262795 BBOX1O75936 387 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 ZNF131P52739 623 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 ADALQ6DHV7 355 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 BLIDQ8IZY5 108 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 LRRC4Q9HBW1 653 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 CEP85LQ5SZL2 805 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 KRT12Q99456 494 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 RASSF4Q9H2L5 321 aa17.35■□□□□ 0.37
SHANK3-201ENST00000262795 E7EWF7 191 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 BUB1BO60566 1050 aaPredicted RBP17.34■□□□□ 0.37
SHANK3-201ENST00000262795 LRRC43Q8N309 656 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 ANKS4BQ8N8V4 417 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 TTC14Q96N46 770 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 KIAA1024Q9UPX6 916 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 ODR4Q5SWX8 454 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 KIF28PB7ZC32 967 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 PFDN6O15212 129 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 HADHQ16836 314 aaKnown RBP17.34■□□□□ 0.37
SHANK3-201ENST00000262795 BBS5Q8N3I7 341 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 CARD14Q9BXL6 1004 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 RBSNQ9H1K0 784 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 SLC39A2Q9NP94 309 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 ATP8B3O60423 1300 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 LLGL1Q15334 1064 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 KBTBD3Q8NAB2 608 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 RILPQ96NA2 401 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 PALLDQ8WX93 1383 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 GRIN3BO60391 1043 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 HEXIM2Q96MH2 286 aaKnown RBP17.34■□□□□ 0.37
SHANK3-201ENST00000262795 DOLKQ9UPQ8 538 aa17.34■□□□□ 0.37
SHANK3-201ENST00000262795 POLR2BP30876 1174 aaKnown RBP17.33■□□□□ 0.37
SHANK3-201ENST00000262795 WDR64B1ANS9 1081 aa17.33■□□□□ 0.37
SHANK3-201ENST00000262795 CTSHP09668 335 aa17.33■□□□□ 0.36
SHANK3-201ENST00000262795 GNAT1P11488 350 aa17.33■□□□□ 0.36
SHANK3-201ENST00000262795 FAM83BQ5T0W9 1011 aa17.33■□□□□ 0.36
SHANK3-201ENST00000262795 RNF207Q6ZRF8 634 aa17.33■□□□□ 0.36
SHANK3-201ENST00000262795 GH2P01242 217 aa17.33■□□□□ 0.36
SHANK3-201ENST00000262795 SFMBT2Q5VUG0 894 aa17.33■□□□□ 0.36
SHANK3-201ENST00000262795 SOX5P35711 763 aa17.33■□□□□ 0.36
SHANK3-201ENST00000262795 SIX6OS1Q8N1H7 587 aa17.33■□□□□ 0.36
SHANK3-201ENST00000262795 THEM5Q8N1Q8 247 aa17.33■□□□□ 0.36
SHANK3-201ENST00000262795 IPO11Q9UI26 975 aaKnown RBP17.33■□□□□ 0.36
SHANK3-201ENST00000262795 HACL1Q9UJ83 578 aa17.33■□□□□ 0.36
SHANK3-201ENST00000262795 XRCC5P13010 732 aaKnown RBP17.33■□□□□ 0.36
SHANK3-201ENST00000262795 CYP2B6P20813 491 aa17.33■□□□□ 0.36
SHANK3-201ENST00000262795 USP17L2Q6R6M4 530 aa17.33■□□□□ 0.36
SHANK3-201ENST00000262795 CCDC121Q6ZUS5 278 aa17.33■□□□□ 0.36
SHANK3-201ENST00000262795 NT5C3AQ9H0P0 336 aa17.33■□□□□ 0.36
SHANK3-201ENST00000262795 KRT15P19012 456 aa17.32■□□□□ 0.36
SHANK3-201ENST00000262795 CRKP46108 304 aa17.32■□□□□ 0.36
SHANK3-201ENST00000262795 DYNLT1P63172 113 aa17.32■□□□□ 0.36
SHANK3-201ENST00000262795 ERCC6LQ2NKX8 1250 aa17.32■□□□□ 0.36
SHANK3-201ENST00000262795 CYP2D7A0A087X1C5 515 aa17.32■□□□□ 0.36
SHANK3-201ENST00000262795 CDO1Q16878 200 aa17.32■□□□□ 0.36
SHANK3-201ENST00000262795 HP1BP3Q5SSJ5 553 aaPredicted RBP17.32■□□□□ 0.36
SHANK3-201ENST00000262795 AMNQ9BXJ7 453 aa17.32■□□□□ 0.36
SHANK3-201ENST00000262795 SWAP70Q9UH65 585 aa17.32■□□□□ 0.36
SHANK3-201ENST00000262795 TNKSO95271 1327 aa17.32■□□□□ 0.36
SHANK3-201ENST00000262795 RECQLP46063 649 aaPredicted RBP17.32■□□□□ 0.36
SHANK3-201ENST00000262795 OR6B3Q8NGW1 331 aa17.32■□□□□ 0.36
SHANK3-201ENST00000262795 ATP6V0A1Q93050 837 aa17.32■□□□□ 0.36
SHANK3-201ENST00000262795 DACT3Q96B18 629 aaPredicted RBP17.32■□□□□ 0.36
SHANK3-201ENST00000262795 CLIC2O15247 247 aa17.32■□□□□ 0.36
SHANK3-201ENST00000262795 JAK2O60674 1132 aa17.32■□□□□ 0.36
SHANK3-201ENST00000262795 IQCB1Q15051 598 aa17.32■□□□□ 0.36
SHANK3-201ENST00000262795 CC2D1AQ6P1N0 951 aaPredicted RBP17.32■□□□□ 0.36
SHANK3-201ENST00000262795 PNOCQ13519 176 aa17.32■□□□□ 0.36
SHANK3-201ENST00000262795 SLC9C1Q4G0N8 1177 aa17.32■□□□□ 0.36
SHANK3-201ENST00000262795 KRT40Q6A162 431 aa17.32■□□□□ 0.36
SHANK3-201ENST00000262795 PDZD4Q76G19 769 aaPredicted RBP17.32■□□□□ 0.36
SHANK3-201ENST00000262795 IFNLR1Q8IU57 520 aaPredicted RBP17.32■□□□□ 0.36
SHANK3-201ENST00000262795 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.32■□□□□ 0.364e-6■■■■□ 20.4
SHANK3-201ENST00000262795 PNMA2Q9UL42 364 aa17.32■□□□□ 0.36
SHANK3-201ENST00000262795 CIB2O75838 187 aa17.31■□□□□ 0.36
SHANK3-201ENST00000262795 PLEKHM2Q8IWE5 1019 aa17.31■□□□□ 0.36
SHANK3-201ENST00000262795 GJD4Q96KN9 370 aaPredicted RBP17.31■□□□□ 0.36
SHANK3-201ENST00000262795 PI4KBQ9UBF8 816 aa17.31■□□□□ 0.36
SHANK3-201ENST00000262795 INTS8Q75QN2 995 aaKnown RBP17.31■□□□□ 0.36
SHANK3-201ENST00000262795 CCDC170Q8IYT3 715 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms