RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 FGRP09769 529 aa19.44■□□□□ 0.7
TRAM1-201ENST00000262213 EIF4A3P38919 411 aaKnown RBP19.44■□□□□ 0.7
TRAM1-201ENST00000262213 LIG3P49916 1009 aa19.44■□□□□ 0.7
TRAM1-201ENST00000262213 NAP1L1P55209 391 aaKnown RBP19.44■□□□□ 0.7
TRAM1-201ENST00000262213 INTS5Q6P9B9 1019 aaKnown RBP19.44■□□□□ 0.7
TRAM1-201ENST00000262213 BICDL1Q6ZP65 573 aa19.44■□□□□ 0.7
TRAM1-201ENST00000262213 AENQ8WTP8 325 aaKnown RBP19.44■□□□□ 0.7
TRAM1-201ENST00000262213 NSUN4Q96CB9 384 aaKnown RBP19.44■□□□□ 0.7
TRAM1-201ENST00000262213 CCDC87Q9NVE4 849 aa19.44■□□□□ 0.7
TRAM1-201ENST00000262213 PCDHA13Q9Y5I0 950 aa19.44■□□□□ 0.7
TRAM1-201ENST00000262213 USP17L3A6NCW0 530 aa19.43■□□□□ 0.7
TRAM1-201ENST00000262213 USP17L4A6NCW7 530 aa19.43■□□□□ 0.7
TRAM1-201ENST00000262213 ORC4O43929 436 aa19.43■□□□□ 0.7
TRAM1-201ENST00000262213 ZPR1O75312 459 aa19.43■□□□□ 0.7
TRAM1-201ENST00000262213 GNGT1P63211 74 aa19.43■□□□□ 0.7
TRAM1-201ENST00000262213 USP17L1Q7RTZ2 530 aa19.43■□□□□ 0.7
TRAM1-201ENST00000262213 CCDC47Q96A33 483 aaKnown RBP19.43■□□□□ 0.7
TRAM1-201ENST00000262213 ARHGAP20Q9P2F6 1191 aa19.43■□□□□ 0.7
TRAM1-201ENST00000262213 CACNA1SQ13698 1873 aa19.43■□□□□ 0.7
TRAM1-201ENST00000262213 CAMTA2O94983 1202 aa19.43■□□□□ 0.7
TRAM1-201ENST00000262213 SPATA4Q8NEY3 305 aa19.43■□□□□ 0.7
TRAM1-201ENST00000262213 TCP11L1Q9NUJ3 509 aa19.43■□□□□ 0.7
TRAM1-201ENST00000262213 SAMM50Q9Y512 469 aa19.43■□□□□ 0.7
TRAM1-201ENST00000262213 ABCA3Q99758 1704 aa19.42■□□□□ 0.7
TRAM1-201ENST00000262213 CCNT1O60563 726 aaKnown RBP19.42■□□□□ 0.7
TRAM1-201ENST00000262213 TECP42680 631 aa19.42■□□□□ 0.7
TRAM1-201ENST00000262213 TSEN2Q8NCE0 465 aaKnown RBP19.42■□□□□ 0.7
TRAM1-201ENST00000262213 BCAS4Q8TDM0 211 aa19.42■□□□□ 0.7
TRAM1-201ENST00000262213 NOC3LQ8WTT2 800 aaKnown RBP19.42■□□□□ 0.7
TRAM1-201ENST00000262213 CAPS2Q9BXY5 557 aa19.42■□□□□ 0.7
TRAM1-201ENST00000262213 TRIM9Q9C026 710 aa19.42■□□□□ 0.7
TRAM1-201ENST00000262213 JRKLQ9Y4A0 524 aa19.42■□□□□ 0.7
TRAM1-201ENST00000262213 BICDL2A1A5D9 508 aa19.42■□□□□ 0.7
TRAM1-201ENST00000262213 BUB1O43683 1085 aa19.42■□□□□ 0.7
TRAM1-201ENST00000262213 GTF2A1P52655 376 aaPredicted RBP19.42■□□□□ 0.7
TRAM1-201ENST00000262213 KIF11P52732 1056 aa19.42■□□□□ 0.7
TRAM1-201ENST00000262213 ERFEQ4G0M1 354 aa19.42■□□□□ 0.7
TRAM1-201ENST00000262213 RRAGAQ7L523 313 aa19.42■□□□□ 0.7
TRAM1-201ENST00000262213 FAM114A1Q8IWE2 563 aa19.42■□□□□ 0.7
TRAM1-201ENST00000262213 TRIM58Q8NG06 486 aa19.42■□□□□ 0.7
TRAM1-201ENST00000262213 PURBQ96QR8 312 aaKnown RBP19.42■□□□□ 0.7
TRAM1-201ENST00000262213 OSBPL9Q96SU4 736 aa19.42■□□□□ 0.7
TRAM1-201ENST00000262213 PPARDQ03181 441 aa19.41■□□□□ 0.7
TRAM1-201ENST00000262213 SLC35G1Q2M3R5 365 aa19.41■□□□□ 0.7
TRAM1-201ENST00000262213 KCTD16Q68DU8 428 aa19.41■□□□□ 0.7
TRAM1-201ENST00000262213 RETREG2Q8NC44 543 aa19.41■□□□□ 0.7
TRAM1-201ENST00000262213 ARL8AQ96BM9 186 aa19.41■□□□□ 0.7
TRAM1-201ENST00000262213 RUFY1Q96T51 708 aa19.41■□□□□ 0.7
TRAM1-201ENST00000262213 SH2D4AQ9H788 454 aa19.41■□□□□ 0.7
TRAM1-201ENST00000262213 IL17RBQ9NRM6 502 aa19.41■□□□□ 0.7
TRAM1-201ENST00000262213 EXOC5O00471 708 aa19.41■□□□□ 0.7
TRAM1-201ENST00000262213 PCP11498 1178 aaKnown RBP19.41■□□□□ 0.7
TRAM1-201ENST00000262213 PARP10Q53GL7 1025 aa19.41■□□□□ 0.7
TRAM1-201ENST00000262213 DYMQ7RTS9 669 aa19.41■□□□□ 0.7
TRAM1-201ENST00000262213 TMC4Q7Z404 712 aa19.41■□□□□ 0.7
TRAM1-201ENST00000262213 MS4A14Q96JA4 679 aa19.41■□□□□ 0.7
TRAM1-201ENST00000262213 TSGA10Q9BZW7 698 aa19.41■□□□□ 0.7
TRAM1-201ENST00000262213 CCSER1Q9C0I3 900 aa19.41■□□□□ 0.7
TRAM1-201ENST00000262213 STX8Q9UNK0 236 aa19.41■□□□□ 0.7
TRAM1-201ENST00000262213 AMOTL1Q8IY63 956 aa19.4■□□□□ 0.7
TRAM1-201ENST00000262213 FNBP4Q8N3X1 1017 aaPredicted RBP19.4■□□□□ 0.7
TRAM1-201ENST00000262213 CELF1Q92879 486 aaKnown RBP19.4■□□□□ 0.7
TRAM1-201ENST00000262213 SEMA6BQ9H3T3 888 aa19.4■□□□□ 0.7
TRAM1-201ENST00000262213 MINPP1Q9UNW1 487 aa19.4■□□□□ 0.7
TRAM1-201ENST00000262213 CYTH3O43739 400 aa19.4■□□□□ 0.7
TRAM1-201ENST00000262213 ATP1A2P50993 1020 aa19.4■□□□□ 0.7
TRAM1-201ENST00000262213 ICE2Q659A1 982 aa19.4■□□□□ 0.7
TRAM1-201ENST00000262213 ZNF662Q6ZS27 426 aa19.4■□□□□ 0.7
TRAM1-201ENST00000262213 TADA2BQ86TJ2 420 aa19.4■□□□□ 0.7
TRAM1-201ENST00000262213 EFCAB13Q8IY85 973 aa19.4■□□□□ 0.7
TRAM1-201ENST00000262213 MMGT1Q8N4V1 131 aa19.4■□□□□ 0.7
TRAM1-201ENST00000262213 SH2D3CQ8N5H7 860 aa19.4■□□□□ 0.7
TRAM1-201ENST00000262213 VAT1LQ9HCJ6 419 aa19.4■□□□□ 0.7
TRAM1-201ENST00000262213 LRRC53A6NM62 1247 aa19.39■□□□□ 0.7
TRAM1-201ENST00000262213 EBAG9O00559 213 aa19.39■□□□□ 0.7
TRAM1-201ENST00000262213 PPFIA1Q13136 1202 aa19.39■□□□□ 0.7
TRAM1-201ENST00000262213 UBE4AQ14139 1066 aa19.39■□□□□ 0.7
TRAM1-201ENST00000262213 CCDC24Q8N4L8 307 aa19.39■□□□□ 0.7
TRAM1-201ENST00000262213 CCDC155Q8N6L0 562 aa19.39■□□□□ 0.7
TRAM1-201ENST00000262213 SLC44A5Q8NCS7 719 aa19.39■□□□□ 0.7
TRAM1-201ENST00000262213 MKNK2Q9HBH9 465 aa19.39■□□□□ 0.7
TRAM1-201ENST00000262213 SALL4Q9UJQ4 1053 aa19.39■□□□□ 0.7
TRAM1-201ENST00000262213 LTBP4Q8N2S1 1624 aa19.39■□□□□ 0.69
TRAM1-201ENST00000262213 ESYT3A0FGR9 886 aa19.39■□□□□ 0.69
TRAM1-201ENST00000262213 MAGEA1P43355 309 aa19.39■□□□□ 0.69
TRAM1-201ENST00000262213 RNASE9P60153 205 aaKnown RBP19.39■□□□□ 0.69
TRAM1-201ENST00000262213 RASSF7Q02833 373 aa19.39■□□□□ 0.69
TRAM1-201ENST00000262213 SMIM5Q71RC9 77 aa19.39■□□□□ 0.69
TRAM1-201ENST00000262213 KIAA0895Q8NCT3 520 aa19.39■□□□□ 0.69
TRAM1-201ENST00000262213 TANGO6Q9C0B7 1094 aa19.39■□□□□ 0.69
TRAM1-201ENST00000262213 MAD2L2Q9UI95 211 aa19.39■□□□□ 0.69
TRAM1-201ENST00000262213 FAM169AQ9Y6X4 670 aa19.39■□□□□ 0.69
TRAM1-201ENST00000262213 FLT1P17948 1338 aa19.39■□□□□ 0.69
TRAM1-201ENST00000262213 ADAMTS2O95450 1211 aa19.38■□□□□ 0.69
TRAM1-201ENST00000262213 GFPT1Q06210 699 aaPredicted RBP19.38■□□□□ 0.69
TRAM1-201ENST00000262213 ENOX2Q16206 610 aaKnown RBP19.38■□□□□ 0.69
TRAM1-201ENST00000262213 ALS2CR12Q96Q35 445 aa19.38■□□□□ 0.69
TRAM1-201ENST00000262213 RBM12Q9NTZ6 932 aaKnown RBP19.38■□□□□ 0.69
TRAM1-201ENST00000262213 M0R2N6 131 aa19.38■□□□□ 0.69
TRAM1-201ENST00000262213 SHOX2O60902 331 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms