RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 GPR75-ASB3A0A0A6YYF3 556 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 SMCO2A6NFE2 343 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 OR52Z1P0C646 297 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 GRB10Q13322 594 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 ECM1Q16610 540 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 SPTY2D1Q68D10 685 aaPredicted RBP11.32□□□□□ -0.6
COPB1-201ENST00000249923 PRR5LQ6MZQ0 368 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 KCNK18Q7Z418 384 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 TBCKQ8TEA7 893 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 HNRNPLLQ8WVV9 542 aaKnown RBP11.32□□□□□ -0.6
COPB1-201ENST00000249923 PCMTD1Q96MG8 357 aaPredicted RBP11.32□□□□□ -0.6
COPB1-201ENST00000249923 PNMA5Q96PV4 448 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 MTMR9Q96QG7 549 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 CD209Q9NNX6 404 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 BIN2Q9UBW5 565 aaPredicted RBP11.32□□□□□ -0.6
COPB1-201ENST00000249923 RTCBQ9Y3I0 505 aaKnown RBP11.32□□□□□ -0.6
COPB1-201ENST00000249923 PSMD14O00487 310 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 PPP1R11O60927 126 aaPredicted RBP11.32□□□□□ -0.6
COPB1-201ENST00000249923 NAPAP54920 295 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 TRIM14Q14142 442 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 ZSCAN29Q8IWY8 852 aaPredicted RBP11.32□□□□□ -0.6
COPB1-201ENST00000249923 OR8K1Q8NGG5 319 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 C8orf37Q96NL8 207 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 MMS19Q96T76 1030 aa11.32□□□□□ -0.6
COPB1-201ENST00000249923 UBR3Q6ZT12 1888 aa11.31□□□□□ -0.6
COPB1-201ENST00000249923 FRMPD2Q68DX3 1309 aaPredicted RBP11.31□□□□□ -0.6
COPB1-201ENST00000249923 PDE2AO00408 941 aaPredicted RBP11.31□□□□□ -0.6
COPB1-201ENST00000249923 CSGALNACT2Q8N6G5 542 aa11.31□□□□□ -0.6
COPB1-201ENST00000249923 NEDD1Q8NHV4 660 aa11.31□□□□□ -0.6
COPB1-201ENST00000249923 CNOT6LQ96LI5 555 aaKnown RBP11.31□□□□□ -0.6
COPB1-201ENST00000249923 C7orf25Q9BPX7 421 aa11.31□□□□□ -0.6
COPB1-201ENST00000249923 VAT1LQ9HCJ6 419 aa11.31□□□□□ -0.6
COPB1-201ENST00000249923 CWC15Q9P013 229 aaKnown RBP11.31□□□□□ -0.6
COPB1-201ENST00000249923 POLLQ9UGP5 575 aa11.31□□□□□ -0.6
COPB1-201ENST00000249923 TDP2O95551 362 aa11.31□□□□□ -0.6
COPB1-201ENST00000249923 CYP27A1Q02318 531 aa11.31□□□□□ -0.6
COPB1-201ENST00000249923 RAD51AP2Q09MP3 1159 aa11.31□□□□□ -0.6
COPB1-201ENST00000249923 VPS72Q15906 364 aa11.31□□□□□ -0.6
COPB1-201ENST00000249923 CCDC178Q5BJE1 867 aa11.31□□□□□ -0.6
COPB1-201ENST00000249923 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.31□□□□□ -0.6
COPB1-201ENST00000249923 KRT26Q7Z3Y9 468 aa11.31□□□□□ -0.6
COPB1-201ENST00000249923 ZNF444Q8N0Y2 327 aaPredicted RBP11.31□□□□□ -0.6
COPB1-201ENST00000249923 CCDC148Q8NFR7 591 aa11.31□□□□□ -0.6
COPB1-201ENST00000249923 P2RX5Q93086 422 aa11.31□□□□□ -0.6
COPB1-201ENST00000249923 PDE11AQ9HCR9 933 aa11.31□□□□□ -0.6
COPB1-201ENST00000249923 MYO6Q9UM54 1294 aa11.31□□□□□ -0.6
COPB1-201ENST00000249923 LEMD3Q9Y2U8 911 aa11.31□□□□□ -0.6
COPB1-201ENST00000249923 MYH7BA7E2Y1 1941 aa11.31□□□□□ -0.6
COPB1-201ENST00000249923 MYMKA6NI61 221 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 LRRIQ3A6PVS8 624 aaPredicted RBP11.3□□□□□ -0.6
COPB1-201ENST00000249923 ZNF185O15231 689 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 IL1R1P14778 569 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 MATR3P43243 847 aaKnown RBP eCLIP11.3□□□□□ -0.6
COPB1-201ENST00000249923 PDE4DQ08499 809 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 BRD3Q15059 726 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 CRY2Q49AN0 593 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 TMED8Q6PL24 325 aaPredicted RBP11.3□□□□□ -0.6
COPB1-201ENST00000249923 C15orf52Q6ZUT6 534 aaKnown RBP11.3□□□□□ -0.6
COPB1-201ENST00000249923 CEP112Q8N8E3 955 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 CAPZA3Q96KX2 299 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 LUC7L2Q9Y383 392 aaKnown RBP11.3□□□□□ -0.6
COPB1-201ENST00000249923 ZC3H4Q9UPT8 1303 aaKnown RBP11.3□□□□□ -0.6
COPB1-201ENST00000249923 POTEMA6NI47 508 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 LAD1O00515 517 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 PDHBP11177 359 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 ERCC3P19447 782 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 GALNT17Q6IS24 598 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 SMCR8Q8TEV9 937 aaPredicted RBP11.3□□□□□ -0.6
COPB1-201ENST00000249923 COA7Q96BR5 231 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 PURBQ96QR8 312 aaKnown RBP11.3□□□□□ -0.6
COPB1-201ENST00000249923 FGFBP2Q9BYJ0 223 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 SLC39A2Q9NP94 309 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 LRRC37AA6NMS7 1700 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 ZMYND10O75800 440 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 CCNE1P24864 410 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 GNAQP50148 359 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 PIP4K2BP78356 416 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 NONOQ15233 471 aaKnown RBP eCLIP11.3□□□□□ -0.6
COPB1-201ENST00000249923 NEK8Q86SG6 692 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 CAGE1Q8TC20 777 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 DRC1Q96MC2 740 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 RIOX1Q9H6W3 641 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 NHEJ1Q9H9Q4 299 aaPredicted RBP11.3□□□□□ -0.6
COPB1-201ENST00000249923 DDX4Q9NQI0 724 aaKnown RBP11.3□□□□□ -0.6
COPB1-201ENST00000249923 EXOC1Q9NV70 894 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 MYO1AQ9UBC5 1043 aa11.3□□□□□ -0.6
COPB1-201ENST00000249923 PSMA7O14818 248 aa11.29□□□□□ -0.6
COPB1-201ENST00000249923 MYL1P05976 194 aa11.29□□□□□ -0.6
COPB1-201ENST00000249923 MYBL2P10244 700 aa11.29□□□□□ -0.6
COPB1-201ENST00000249923 FAM196AQ6ZSG2 479 aa11.29□□□□□ -0.6
COPB1-201ENST00000249923 CCDC155Q8N6L0 562 aa11.29□□□□□ -0.6
COPB1-201ENST00000249923 DHTKD1Q96HY7 919 aaPredicted RBP11.29□□□□□ -0.6
COPB1-201ENST00000249923 SIK3Q9Y2K2 1263 aa11.29□□□□□ -0.6
COPB1-201ENST00000249923 GAKO14976 1311 aa11.29□□□□□ -0.6
COPB1-201ENST00000249923 GREB1LQ9C091 1923 aaPredicted RBP11.29□□□□□ -0.6
COPB1-201ENST00000249923 UFL1O94874 794 aa11.29□□□□□ -0.6
COPB1-201ENST00000249923 BAG3O95817 575 aa11.29□□□□□ -0.6
COPB1-201ENST00000249923 EIF6P56537 245 aaKnown RBP11.29□□□□□ -0.6
COPB1-201ENST00000249923 ASIC1P78348 528 aa11.29□□□□□ -0.6
COPB1-201ENST00000249923 EHHADHQ08426 723 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms