RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 XRCC5P13010 732 aaKnown RBP27.24■■□□□ 1.95
HOMER3-201ENST00000221222 HEATR3Q7Z4Q2 680 aa27.24■■□□□ 1.95
HOMER3-201ENST00000221222 CCDC83Q8IWF9 413 aa27.24■■□□□ 1.95
HOMER3-201ENST00000221222 GPKOWQ92917 476 aaPredicted RBP eCLIP27.24■■□□□ 1.95
HOMER3-201ENST00000221222 DDX11Q96FC9 970 aa27.24■■□□□ 1.95
HOMER3-201ENST00000221222 TMEM106CQ9BVX2 250 aa27.24■■□□□ 1.95
HOMER3-201ENST00000221222 BARHL2Q9NY43 387 aa27.24■■□□□ 1.95
HOMER3-201ENST00000221222 COBLO75128 1261 aa27.23■■□□□ 1.95
HOMER3-201ENST00000221222 DEXIO95424 95 aa27.23■■□□□ 1.95
HOMER3-201ENST00000221222 PPP1R18Q6NYC8 613 aa27.23■■□□□ 1.95
HOMER3-201ENST00000221222 NSMFQ6X4W1 530 aa27.23■■□□□ 1.95
HOMER3-201ENST00000221222 SAMD3Q8N6K7 520 aa27.23■■□□□ 1.95
HOMER3-201ENST00000221222 APBA2Q99767 749 aa27.23■■□□□ 1.95
HOMER3-201ENST00000221222 LLPHQ9BRT6 129 aaKnown RBP27.23■■□□□ 1.95
HOMER3-201ENST00000221222 PGK2P07205 417 aa27.22■■□□□ 1.95
HOMER3-201ENST00000221222 RNF207Q6ZRF8 634 aa27.22■■□□□ 1.95
HOMER3-201ENST00000221222 DPP9Q86TI2 863 aa27.22■■□□□ 1.95
HOMER3-201ENST00000221222 SNX21Q969T3 373 aa27.22■■□□□ 1.95
HOMER3-201ENST00000221222 SLC5A4Q9NY91 659 aa27.22■■□□□ 1.95
HOMER3-201ENST00000221222 MAP3K20Q9NYL2 800 aaKnown RBP27.22■■□□□ 1.95
HOMER3-201ENST00000221222 DIS3Q9Y2L1 958 aaKnown RBP27.22■■□□□ 1.95
HOMER3-201ENST00000221222 STXBP3O00186 592 aa27.22■■□□□ 1.95
HOMER3-201ENST00000221222 CYP2B6P20813 491 aa27.22■■□□□ 1.95
HOMER3-201ENST00000221222 BAATQ14032 418 aaPredicted RBP27.22■■□□□ 1.95
HOMER3-201ENST00000221222 ZNF792Q3KQV3 632 aa27.22■■□□□ 1.95
HOMER3-201ENST00000221222 FAM133AQ8N9E0 248 aa27.22■■□□□ 1.95
HOMER3-201ENST00000221222 RAET1EQ8TD07 263 aa27.22■■□□□ 1.95
HOMER3-201ENST00000221222 PTPDC1A2A3K4 754 aa27.21■■□□□ 1.95
HOMER3-201ENST00000221222 HSD17B4P51659 736 aa27.21■■□□□ 1.95
HOMER3-201ENST00000221222 RPS6P62753 249 aaKnown RBP27.21■■□□□ 1.95
HOMER3-201ENST00000221222 TYW1BQ6NUM6 668 aa27.21■■□□□ 1.95
HOMER3-201ENST00000221222 SLC30A10Q6XR72 485 aa27.21■■□□□ 1.95
HOMER3-201ENST00000221222 TBC1D5Q92609 795 aa27.21■■□□□ 1.95
HOMER3-201ENST00000221222 POTEB2H3BUK9 544 aa27.2■■□□□ 1.94
HOMER3-201ENST00000221222 NAPAP54920 295 aa27.2■■□□□ 1.94
HOMER3-201ENST00000221222 SMARCC2Q8TAQ2 1214 aa27.2■■□□□ 1.94
HOMER3-201ENST00000221222 NPLOC4Q8TAT6 608 aa27.2■■□□□ 1.94
HOMER3-201ENST00000221222 PXYLP1Q8TE99 480 aa27.2■■□□□ 1.94
HOMER3-201ENST00000221222 ORC3Q9UBD5 711 aaPredicted RBP27.2■■□□□ 1.94
HOMER3-201ENST00000221222 CFBP00751 764 aa27.19■■□□□ 1.94
HOMER3-201ENST00000221222 FDPSP14324 419 aaKnown RBP27.19■■□□□ 1.94
HOMER3-201ENST00000221222 TEX2Q8IWB9 1127 aa27.19■■□□□ 1.94
HOMER3-201ENST00000221222 TRMT44Q8IYL2 757 aaKnown RBP27.19■■□□□ 1.94
HOMER3-201ENST00000221222 SH3GLB2Q9NR46 395 aa27.19■■□□□ 1.94
HOMER3-201ENST00000221222 ESYT2A0FGR8 921 aa27.18■■□□□ 1.94
HOMER3-201ENST00000221222 ADCY3O60266 1144 aa27.18■■□□□ 1.94
HOMER3-201ENST00000221222 JAK2O60674 1132 aa27.18■■□□□ 1.94
HOMER3-201ENST00000221222 IGHA2P01877 340 aa27.18■■□□□ 1.94
HOMER3-201ENST00000221222 CNTN2Q02246 1040 aa27.18■■□□□ 1.94
HOMER3-201ENST00000221222 ZNF467Q7Z7K2 595 aaPredicted RBP27.18■■□□□ 1.94
HOMER3-201ENST00000221222 FAM177A1Q8N128 213 aaPredicted RBP27.18■■□□□ 1.94
HOMER3-201ENST00000221222 CCDC12Q8WUD4 166 aaPredicted RBP27.18■■□□□ 1.94
HOMER3-201ENST00000221222 MAML3Q96JK9 1138 aa27.18■■□□□ 1.94
HOMER3-201ENST00000221222 FGD4Q96M96 766 aa27.18■■□□□ 1.94
HOMER3-201ENST00000221222 PSTPIP2Q9H939 334 aa27.18■■□□□ 1.94
HOMER3-201ENST00000221222 MKI67P46013 3256 aaKnown RBP27.18■■□□□ 1.94
HOMER3-201ENST00000221222 GCOM1H8Y6P7 765 aaPredicted RBP27.17■■□□□ 1.94
HOMER3-201ENST00000221222 PIK3CDO00329 1044 aa27.17■■□□□ 1.94
HOMER3-201ENST00000221222 DTNBO60941 627 aa27.17■■□□□ 1.94
HOMER3-201ENST00000221222 POLR2MP0CAP2 368 aa27.17■■□□□ 1.94
HOMER3-201ENST00000221222 CALML3P27482 149 aa27.17■■□□□ 1.94
HOMER3-201ENST00000221222 OLFML2BQ68BL8 750 aa27.17■■□□□ 1.94
HOMER3-201ENST00000221222 SLAIN1Q8ND83 568 aa27.17■■□□□ 1.94
HOMER3-201ENST00000221222 SYTL5Q8TDW5 730 aaPredicted RBP27.17■■□□□ 1.94
HOMER3-201ENST00000221222 WASF1Q92558 559 aa27.17■■□□□ 1.94
HOMER3-201ENST00000221222 K7ELQ4 463 aaPredicted RBP27.16■■□□□ 1.94
HOMER3-201ENST00000221222 CUL4AQ13619 759 aa27.16■■□□□ 1.94
HOMER3-201ENST00000221222 CCL14Q16627 93 aa27.16■■□□□ 1.94
HOMER3-201ENST00000221222 CCDC148Q8NFR7 591 aa27.16■■□□□ 1.94
HOMER3-201ENST00000221222 SHISA4Q96DD7 197 aa27.16■■□□□ 1.94
HOMER3-201ENST00000221222 RIC8AQ9NPQ8 531 aa27.16■■□□□ 1.94
HOMER3-201ENST00000221222 FLRT1Q9NZU1 646 aa27.16■■□□□ 1.94
HOMER3-201ENST00000221222 BRCA2P51587 3418 aa27.16■■□□□ 1.94
HOMER3-201ENST00000221222 ASTN1O14525 1302 aa27.15■■□□□ 1.94
HOMER3-201ENST00000221222 SOWAHBA6NEL2 793 aa27.15■■□□□ 1.94
HOMER3-201ENST00000221222 MEIS2O14770 477 aa27.15■■□□□ 1.94
HOMER3-201ENST00000221222 HMGN5P82970 282 aaKnown RBP27.15■■□□□ 1.94
HOMER3-201ENST00000221222 MSL3Q8N5Y2 521 aaKnown RBP27.15■■□□□ 1.94
HOMER3-201ENST00000221222 DNERQ8NFT8 737 aa27.15■■□□□ 1.94
HOMER3-201ENST00000221222 TRIB2Q92519 343 aa27.15■■□□□ 1.94
HOMER3-201ENST00000221222 CUL5Q93034 780 aa27.15■■□□□ 1.94
HOMER3-201ENST00000221222 AIFM3Q96NN9 605 aa27.15■■□□□ 1.94
HOMER3-201ENST00000221222 ZMYND12Q9H0C1 365 aa27.15■■□□□ 1.94
HOMER3-201ENST00000221222 GLT8D2Q9H1C3 349 aa27.15■■□□□ 1.94
HOMER3-201ENST00000221222 VPS54Q9P1Q0 977 aa27.15■■□□□ 1.94
HOMER3-201ENST00000221222 COL20A1Q9P218 1284 aa27.15■■□□□ 1.94
HOMER3-201ENST00000221222 ADD3Q9UEY8 706 aaKnown RBP27.15■■□□□ 1.94
HOMER3-201ENST00000221222 LOC102724159A0A0B4J2E5 919 aa27.14■■□□□ 1.94
HOMER3-201ENST00000221222 SMCO2A6NFE2 343 aa27.14■■□□□ 1.94
HOMER3-201ENST00000221222 HOXA13P31271 388 aaPredicted RBP27.14■■□□□ 1.94
HOMER3-201ENST00000221222 GRK4P32298 578 aa27.14■■□□□ 1.94
HOMER3-201ENST00000221222 ADCY7P51828 1080 aa27.14■■□□□ 1.94
HOMER3-201ENST00000221222 MRPL12P52815 198 aaKnown RBP27.14■■□□□ 1.94
HOMER3-201ENST00000221222 PWP2Q15269 919 aaKnown RBP27.14■■□□□ 1.94
HOMER3-201ENST00000221222 MAMDC4Q6UXC1 1216 aa27.14■■□□□ 1.94
HOMER3-201ENST00000221222 PURBQ96QR8 312 aaKnown RBP27.14■■□□□ 1.94
HOMER3-201ENST00000221222 ELNP15502 786 aa27.13■■□□□ 1.93
HOMER3-201ENST00000221222 MTFR1Q15390 333 aa27.13■■□□□ 1.93
HOMER3-201ENST00000221222 ALG1Q9BT22 464 aa27.13■■□□□ 1.93
HOMER3-201ENST00000221222 MCM3APO60318 1980 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms