RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 CYP26C1Q6V0L0 522 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 TTC14Q96N46 770 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 CRAMP1Q96RY5 1269 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 ADPGKQ9BRR6 497 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 PLA2G12BQ9BX93 195 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 NCOA5Q9HCD5 579 aaKnown RBP4.7□□□□□ -1.66
CFTR-201ENST00000003084 RGS12O14924 1447 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 CLRN2A0PK11 232 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 TMEM110-MUSTN1A8MSY1 372 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 XPOTO43592 962 aaKnown RBP4.7□□□□□ -1.66
CFTR-201ENST00000003084 GAP43P17677 238 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 DNA2P51530 1060 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 STAT2P52630 851 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 TBC1D9BQ66K14 1250 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 GIMAP8Q8ND71 665 aaPredicted RBP4.7□□□□□ -1.66
CFTR-201ENST00000003084 ATP6V0A1Q93050 837 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 PHKBQ93100 1093 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 AK8Q96MA6 479 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 MYL10Q9BUA6 226 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 RNF26Q9BY78 433 aaPredicted RBP4.7□□□□□ -1.66
CFTR-201ENST00000003084 LSG1Q9H089 658 aaKnown RBP4.7□□□□□ -1.66
CFTR-201ENST00000003084 CCDC113Q9H0I3 377 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 VPS54Q9P1Q0 977 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 DBNLQ9UJU6 430 aaKnown RBP4.7□□□□□ -1.66
CFTR-201ENST00000003084 FEM1BQ9UK73 627 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 HARSP12081 509 aaKnown RBP4.7□□□□□ -1.66
CFTR-201ENST00000003084 CRKP46108 304 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 MECOMQ03112 1051 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 PTPN12Q05209 780 aaKnown RBP4.7□□□□□ -1.66
CFTR-201ENST00000003084 RAPGEF1Q13905 1077 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 PRR16Q569H4 304 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 HERC4Q5GLZ8 1057 aaPredicted RBP4.7□□□□□ -1.66
CFTR-201ENST00000003084 TAF3Q5VWG9 929 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 USP17L2Q6R6M4 530 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 TMEM179Q6ZVK1 233 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 CCDC125Q86Z20 511 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 CSGALNACT2Q8N6G5 542 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 MAP4K1Q92918 833 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 INCENPQ9NQS7 918 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 SERPINB13Q9UIV8 391 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.7□□□□□ -1.66
CFTR-201ENST00000003084 NDUFB9Q9Y6M9 179 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 ADAMTS13Q76LX8 1427 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 A0A1B0GVL5 298 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 ARHGEF37A1IGU5 675 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 POLR2DO15514 142 aaKnown RBP4.7□□□□□ -1.66
CFTR-201ENST00000003084 EXOC3O60645 756 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 DMP1Q13316 513 aaPredicted RBP4.7□□□□□ -1.66
CFTR-201ENST00000003084 PPP1R18Q6NYC8 613 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 GPBP1Q86WP2 473 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 UBL4BQ8N7F7 174 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 LEO1Q8WVC0 666 aaPredicted RBP4.7□□□□□ -1.66
CFTR-201ENST00000003084 KHSRPQ92945 711 aaKnown RBP eCLIP4.7□□□□□ -1.66
CFTR-201ENST00000003084 RNF34Q969K3 372 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 FAM81BQ96LP2 452 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 ISCA1Q9BUE6 129 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 WDR11Q9BZH6 1224 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 FOXP1Q9H334 677 aaPredicted RBP4.7□□□□□ -1.66
CFTR-201ENST00000003084 SPON1Q9HCB6 807 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 TRMT1Q9NXH9 659 aaKnown RBP4.7□□□□□ -1.66
CFTR-201ENST00000003084 FBXO40Q9UH90 709 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 ZNF215Q9UL58 517 aaPredicted RBP4.7□□□□□ -1.66
CFTR-201ENST00000003084 KCNJ14Q9UNX9 436 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 SOS2Q07890 1332 aaPredicted RBP4.7□□□□□ -1.66
CFTR-201ENST00000003084 ZNF521Q96K83 1311 aa4.7□□□□□ -1.66
CFTR-201ENST00000003084 ITSN1Q15811 1721 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 PRAMEF22A3QJZ6 481 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 SKILP12757 684 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 CPA1P15085 419 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 HOXD10P28358 340 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 STX17P56962 302 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 TNNC1P63316 161 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 XKR9Q5GH70 373 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 STYK1Q6J9G0 422 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 TRIML1Q8N9V2 468 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 MAIP1Q8WWC4 291 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 NELFBQ8WX92 580 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 CNTNAP4Q9C0A0 1308 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 RAD17O75943 681 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 TUBBP07437 444 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 ALAS2P22557 587 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 LIG4P49917 911 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 MMP14P50281 582 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 SYCE1Q8N0S2 351 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 TPCN2Q8NHX9 752 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 SLC16A10Q8TF71 515 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 NSMCE1Q8WV22 266 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 PRIMPOLQ96LW4 560 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 IMPACTQ9P2X3 320 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 PRKAG2Q9UGJ0 569 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 SERPINA10Q9UK55 444 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 ABT1Q9ULW3 272 aaKnown RBP4.69□□□□□ -1.66
CFTR-201ENST00000003084 LHX6Q9UPM6 363 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 COL4A3BPQ9Y5P4 624 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 TECPR2O15040 1411 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 PXDNLA1KZ92 1463 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 PRPF3O43395 683 aaKnown RBP4.69□□□□□ -1.66
CFTR-201ENST00000003084 C21orf2O43822 256 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 ZNF202O95125 648 aa4.69□□□□□ -1.66
CFTR-201ENST00000003084 GSPT1P15170 499 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms