RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 FRMPD3Q5JV73 1810 aa19.8■□□□□ 0.76
PHGDH-234ENST00000642041 PIEZO1Q92508 2521 aa19.79■□□□□ 0.76
PHGDH-234ENST00000642041 PRPF3O43395 683 aaKnown RBP19.79■□□□□ 0.76
PHGDH-234ENST00000642041 COL9A3Q14050 684 aaPredicted RBP19.79■□□□□ 0.76
PHGDH-234ENST00000642041 NTRK3Q16288 839 aa19.79■□□□□ 0.76
PHGDH-234ENST00000642041 MORN1Q5T089 497 aa19.79■□□□□ 0.76
PHGDH-234ENST00000642041 CRACR2BQ8N4Y2 399 aaPredicted RBP19.79■□□□□ 0.76
PHGDH-234ENST00000642041 ADAMTS19Q8TE59 1207 aa19.79■□□□□ 0.76
PHGDH-234ENST00000642041 LPAR1Q92633 364 aa19.79■□□□□ 0.76
PHGDH-234ENST00000642041 ASB2Q96Q27 587 aa19.79■□□□□ 0.76
PHGDH-234ENST00000642041 ALG1Q9BT22 464 aa19.79■□□□□ 0.76
PHGDH-234ENST00000642041 NCOA5Q9HCD5 579 aaKnown RBP19.79■□□□□ 0.76
PHGDH-234ENST00000642041 PI4KBQ9UBF8 816 aa19.79■□□□□ 0.76
PHGDH-234ENST00000642041 SERPINB13Q9UIV8 391 aa19.79■□□□□ 0.76
PHGDH-234ENST00000642041 ATP11BQ9Y2G3 1177 aa19.79■□□□□ 0.76
PHGDH-234ENST00000642041 DNM1LO00429 736 aa19.78■□□□□ 0.76
PHGDH-234ENST00000642041 FDPSP14324 419 aaKnown RBP19.78■□□□□ 0.76
PHGDH-234ENST00000642041 CDK8P49336 464 aa19.78■□□□□ 0.76
PHGDH-234ENST00000642041 RESTQ13127 1097 aa19.78■□□□□ 0.76
PHGDH-234ENST00000642041 APBA2Q99767 749 aa19.78■□□□□ 0.76
PHGDH-234ENST00000642041 BRMS1Q9HCU9 246 aa19.78■□□□□ 0.76
PHGDH-234ENST00000642041 TXNRD2Q9NNW7 524 aa19.78■□□□□ 0.76
PHGDH-234ENST00000642041 PLIN4Q96Q06 1357 aa19.78■□□□□ 0.76
PHGDH-234ENST00000642041 CYP2D7A0A087X1C5 515 aa19.77■□□□□ 0.76
PHGDH-234ENST00000642041 MSCO60682 206 aa19.77■□□□□ 0.76
PHGDH-234ENST00000642041 CYP2D6P10635 497 aa19.77■□□□□ 0.76
PHGDH-234ENST00000642041 ADD1P35611 737 aaKnown RBP19.77■□□□□ 0.76
PHGDH-234ENST00000642041 IRX3P78415 501 aaPredicted RBP19.77■□□□□ 0.76
PHGDH-234ENST00000642041 TROAPQ12815 778 aa19.77■□□□□ 0.76
PHGDH-234ENST00000642041 GNL2Q13823 731 aaKnown RBP19.77■□□□□ 0.76
PHGDH-234ENST00000642041 NUP133Q8WUM0 1156 aa19.77■□□□□ 0.76
PHGDH-234ENST00000642041 SPATA32Q96LK8 384 aa19.77■□□□□ 0.76
PHGDH-234ENST00000642041 UHRF1Q96T88 793 aaPredicted RBP19.77■□□□□ 0.76
PHGDH-234ENST00000642041 P2RX7Q99572 595 aaKnown RBP19.77■□□□□ 0.76
PHGDH-234ENST00000642041 TRIM34Q9BYJ4 488 aa19.77■□□□□ 0.76
PHGDH-234ENST00000642041 DDX20Q9UHI6 824 aaKnown RBP19.77■□□□□ 0.76
PHGDH-234ENST00000642041 MYO9BQ13459 2157 aa19.76■□□□□ 0.75
PHGDH-234ENST00000642041 TOP1P11387 765 aaKnown RBP19.76■□□□□ 0.75
PHGDH-234ENST00000642041 HOXA7P31268 230 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-234ENST00000642041 NOVP48745 357 aa19.76■□□□□ 0.75
PHGDH-234ENST00000642041 FOXD4L5Q5VV16 416 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-234ENST00000642041 GALNT17Q6IS24 598 aa19.76■□□□□ 0.75
PHGDH-234ENST00000642041 GPR142Q7Z601 462 aa19.76■□□□□ 0.75
PHGDH-234ENST00000642041 FOXD4L4Q8WXT5 416 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-234ENST00000642041 C1QTNF1Q9BXJ1 281 aa19.76■□□□□ 0.75
PHGDH-234ENST00000642041 FOXP1Q9H334 677 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-234ENST00000642041 PRDM5Q9NQX1 630 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-234ENST00000642041 GPHNQ9NQX3 736 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-234ENST00000642041 SYNPO2Q9UMS6 1093 aa19.76■□□□□ 0.75
PHGDH-234ENST00000642041 RLFQ13129 1914 aa19.75■□□□□ 0.75
PHGDH-234ENST00000642041 PEX10O60683 326 aa19.75■□□□□ 0.75
PHGDH-234ENST00000642041 YEATS4O95619 227 aa19.75■□□□□ 0.75
PHGDH-234ENST00000642041 RASA1P20936 1047 aa19.75■□□□□ 0.75
PHGDH-234ENST00000642041 HERVK_113P62684 666 aa19.75■□□□□ 0.75
PHGDH-234ENST00000642041 DNM1Q05193 864 aaKnown RBP19.75■□□□□ 0.75
PHGDH-234ENST00000642041 GABPAQ06546 454 aa19.75■□□□□ 0.75
PHGDH-234ENST00000642041 MFSD14CQ5VZR4 134 aa19.75■□□□□ 0.75
PHGDH-234ENST00000642041 SLC39A5Q6ZMH5 540 aa19.75■□□□□ 0.75
PHGDH-234ENST00000642041 PLEKHH3Q7Z736 793 aa19.75■□□□□ 0.75
PHGDH-234ENST00000642041 CCAR1Q8IX12 1150 aaKnown RBP19.75■□□□□ 0.75
PHGDH-234ENST00000642041 KCNG4Q8TDN1 519 aa19.75■□□□□ 0.75
PHGDH-234ENST00000642041 SLC26A6Q9BXS9 759 aa19.75■□□□□ 0.75
PHGDH-234ENST00000642041 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.75■□□□□ 0.752e-7■■■■□ 19.6
PHGDH-234ENST00000642041 SH3GLB2Q9NR46 395 aa19.75■□□□□ 0.75
PHGDH-234ENST00000642041 FAM217BQ9NTX9 383 aaPredicted RBP19.75■□□□□ 0.75
PHGDH-234ENST00000642041 THEGQ9P2T0 379 aa19.75■□□□□ 0.75
PHGDH-234ENST00000642041 RCOR1Q9UKL0 485 aa19.75■□□□□ 0.75
PHGDH-234ENST00000642041 GOLGA6L3A6NEY3 463 aa19.74■□□□□ 0.75
PHGDH-234ENST00000642041 USP17L5A8MUK1 530 aa19.74■□□□□ 0.75
PHGDH-234ENST00000642041 CDC27P30260 824 aa19.74■□□□□ 0.75
PHGDH-234ENST00000642041 ZNF445P59923 1031 aa19.74■□□□□ 0.75
PHGDH-234ENST00000642041 MRPS5P82675 430 aaKnown RBP19.74■□□□□ 0.75
PHGDH-234ENST00000642041 Q3C1V9 767 aa19.74■□□□□ 0.75
PHGDH-234ENST00000642041 CCDC12Q8WUD4 166 aaPredicted RBP19.74■□□□□ 0.75
PHGDH-234ENST00000642041 RNPC3Q96LT9 517 aaKnown RBP19.74■□□□□ 0.75
PHGDH-234ENST00000642041 ZKSCAN3Q9BRR0 538 aa19.74■□□□□ 0.75
PHGDH-234ENST00000642041 PORCNQ9H237 461 aa19.74■□□□□ 0.75
PHGDH-234ENST00000642041 INCENPQ9NQS7 918 aa19.74■□□□□ 0.75
PHGDH-234ENST00000642041 PDLIM7Q9NR12 457 aa19.74■□□□□ 0.75
PHGDH-234ENST00000642041 POLR3EQ9NVU0 708 aa19.74■□□□□ 0.75
PHGDH-234ENST00000642041 RBPJLQ9UBG7 517 aa19.74■□□□□ 0.75
PHGDH-234ENST00000642041 TACC3Q9Y6A5 838 aa19.74■□□□□ 0.75
PHGDH-234ENST00000642041 hCG_1984214I3L0E3 225 aa19.73■□□□□ 0.75
PHGDH-234ENST00000642041 PRDM1O75626 825 aa19.73■□□□□ 0.75
PHGDH-234ENST00000642041 BMP15O95972 392 aa19.73■□□□□ 0.75
PHGDH-234ENST00000642041 U2AF2P26368 475 aaKnown RBP eCLIP19.73■□□□□ 0.75
PHGDH-234ENST00000642041 CALML3P27482 149 aa19.73■□□□□ 0.75
PHGDH-234ENST00000642041 PLCD1P51178 756 aa19.73■□□□□ 0.75
PHGDH-234ENST00000642041 ERVK-9P63128 1117 aa19.73■□□□□ 0.75
PHGDH-234ENST00000642041 ERVK-24P63145 666 aa19.73■□□□□ 0.75
PHGDH-234ENST00000642041 MAP2K5Q13163 448 aa19.73■□□□□ 0.75
PHGDH-234ENST00000642041 ZNF713Q8N859 430 aaPredicted RBP19.73■□□□□ 0.75
PHGDH-234ENST00000642041 PNMA1Q8ND90 353 aa19.73■□□□□ 0.75
PHGDH-234ENST00000642041 ZNF576Q9H609 170 aa19.73■□□□□ 0.75
PHGDH-234ENST00000642041 AS3MTQ9HBK9 375 aa19.73■□□□□ 0.75
PHGDH-234ENST00000642041 RTEL1Q9NZ71 1219 aa19.73■□□□□ 0.75
PHGDH-234ENST00000642041 HERC5Q9UII4 1024 aaKnown RBP19.73■□□□□ 0.75
PHGDH-234ENST00000642041 CEP131Q9UPN4 1083 aa19.73■□□□□ 0.75
PHGDH-234ENST00000642041 CNPY2Q9Y2B0 182 aa19.73■□□□□ 0.75
PHGDH-234ENST00000642041 MORC2Q9Y6X9 1032 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms