RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 GTF3C6Q969F1 213 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 MPHOSPH6Q99547 160 aaKnown RBP7.57□□□□□ -1.2
RTTN-215ENST00000639487 RIT2Q99578 217 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 CCDC8Q9H0W5 538 aaPredicted RBP7.57□□□□□ -1.2
RTTN-215ENST00000639487 TRPV6Q9H1D0 765 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 CUEDC2Q9H467 287 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 DBNDD1Q9H9R9 158 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 KCNMB3Q9NPA1 279 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 PDLIM7Q9NR12 457 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 CGNQ9P2M7 1197 aaKnown RBP7.57□□□□□ -1.2
RTTN-215ENST00000639487 DBR1Q9UK59 544 aaKnown RBP7.57□□□□□ -1.2
RTTN-215ENST00000639487 CERKLQ49MI3 558 aaPredicted RBP7.57□□□□□ -1.2
RTTN-215ENST00000639487 ENAHQ8N8S7 591 aaPredicted RBP7.57□□□□□ -1.2
RTTN-215ENST00000639487 SPOCK2Q92563 424 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 SLC5A5Q92911 643 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 MCM3APO60318 1980 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 DNM1LO00429 736 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 EFCAB14O75071 495 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 VCAM1P19320 739 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 MAP2K5Q13163 448 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 MAPK8IP2Q13387 824 aaPredicted RBP7.57□□□□□ -1.2
RTTN-215ENST00000639487 PDIA5Q14554 519 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 MEA1Q16626 185 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 NFRKBQ6P4R8 1299 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 PPP4R3CPQ6ZMV5 832 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 OXCT2Q9BYC2 517 aaPredicted RBP7.57□□□□□ -1.2
RTTN-215ENST00000639487 EHMT1Q9H9B1 1298 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 SRRDQ9UH36 339 aa7.57□□□□□ -1.2
RTTN-215ENST00000639487 SPATA31C2B4DYI2 1134 aa7.56□□□□□ -1.2
RTTN-215ENST00000639487 ZBTB5O15062 677 aa7.56□□□□□ -1.2
RTTN-215ENST00000639487 MYCNP04198 464 aaPredicted RBP7.56□□□□□ -1.2
RTTN-215ENST00000639487 PKN1Q16512 942 aa7.56□□□□□ -1.2
RTTN-215ENST00000639487 SLC4A10Q6U841 1118 aa7.56□□□□□ -1.2
RTTN-215ENST00000639487 CYP26C1Q6V0L0 522 aa7.56□□□□□ -1.2
RTTN-215ENST00000639487 ZNF589Q86UQ0 364 aaPredicted RBP7.56□□□□□ -1.2
RTTN-215ENST00000639487 GPATCH11Q8N954 259 aa7.56□□□□□ -1.2
RTTN-215ENST00000639487 AIDAQ96BJ3 306 aa7.56□□□□□ -1.2
RTTN-215ENST00000639487 STRA6Q9BX79 667 aa7.56□□□□□ -1.2
RTTN-215ENST00000639487 IRX2Q9BZI1 471 aaPredicted RBP7.56□□□□□ -1.2
RTTN-215ENST00000639487 HSFX1Q9UBD0 423 aa7.56□□□□□ -1.2
RTTN-215ENST00000639487 RBPJLQ9UBG7 517 aa7.56□□□□□ -1.2
RTTN-215ENST00000639487 EXOC6BQ9Y2D4 811 aa7.56□□□□□ -1.2
RTTN-215ENST00000639487 CSADQ9Y600 493 aa7.56□□□□□ -1.2
RTTN-215ENST00000639487 ZNF865P0CJ78 1059 aaPredicted RBP7.56□□□□□ -1.2
RTTN-215ENST00000639487 PIP4K2AP48426 406 aaPredicted RBP7.56□□□□□ -1.2
RTTN-215ENST00000639487 OPTNQ96CV9 577 aa7.56□□□□□ -1.2
RTTN-215ENST00000639487 CAPNS2Q96L46 248 aa7.56□□□□□ -1.2
RTTN-215ENST00000639487 ANTXR1Q9H6X2 564 aa7.56□□□□□ -1.2
RTTN-215ENST00000639487 C17orf75Q9HAS0 396 aa7.56□□□□□ -1.2
RTTN-215ENST00000639487 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.56□□□□□ -1.2
RTTN-215ENST00000639487 CALML3P27482 149 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 RGS2P41220 211 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 FCGRTP55899 365 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 SMAP1Q8IYB5 467 aaPredicted RBP7.55□□□□□ -1.2
RTTN-215ENST00000639487 PIAS4Q8N2W9 510 aaPredicted RBP7.55□□□□□ -1.2
RTTN-215ENST00000639487 NME8Q8N427 588 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 CCDC148Q8NFR7 591 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 AK8Q96MA6 479 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 ELAC1Q9H777 363 aaKnown RBP7.55□□□□□ -1.2
RTTN-215ENST00000639487 MRPL11Q9Y3B7 192 aaKnown RBP7.55□□□□□ -1.2
RTTN-215ENST00000639487 BTBD19C9JJ37 291 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 STXBP3O00186 592 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 STAU1O95793 577 aaKnown RBP7.55□□□□□ -1.2
RTTN-215ENST00000639487 NASPP49321 788 aaPredicted RBP7.55□□□□□ -1.2
RTTN-215ENST00000639487 C12orf56Q8IXR9 622 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 TEX13BQ9BXU2 312 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 SLC4A4Q9Y6R1 1079 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 ADAMTS4O75173 837 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 BAIAP3O94812 1187 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 HSP90AA1P07900 732 aaKnown RBP7.55□□□□□ -1.2
RTTN-215ENST00000639487 GJA8P48165 433 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 ERVK-9P63128 1117 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 ERVK-24P63145 666 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 IRX3P78415 501 aaPredicted RBP7.55□□□□□ -1.2
RTTN-215ENST00000639487 NFIAQ12857 509 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 TRIM71Q2Q1W2 868 aaKnown RBP7.55□□□□□ -1.2
RTTN-215ENST00000639487 BRAPQ7Z569 592 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 HDAC7Q8WUI4 952 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 POLR3CQ9BUI4 534 aaPredicted RBP7.55□□□□□ -1.2
RTTN-215ENST00000639487 BCL2L13Q9BXK5 485 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 NMRK2Q9NPI5 230 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 DIAPH3Q9NSV4 1193 aa7.55□□□□□ -1.2
RTTN-215ENST00000639487 RBM8AQ9Y5S9 174 aaKnown RBP7.55□□□□□ -1.2
RTTN-215ENST00000639487 IGLV3-22A0A075B6J6 115 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 A6NJR5 290 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 PITPNM1O00562 1244 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 EDIL3O43854 480 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 STBD1O95210 358 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 DEXIO95424 95 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 HMGCRP04035 888 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 VEGFBP49765 207 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 PLCD1P51178 756 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 MGAT3Q09327 533 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 SLC35G1Q2M3R5 365 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 XKR4Q5GH76 650 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 SYDE2Q5VT97 1194 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 B4GALNT3Q6L9W6 998 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 ZNF746Q6NUN9 644 aaPredicted RBP7.54□□□□□ -1.2
RTTN-215ENST00000639487 LIMS2Q7Z4I7 341 aa7.54□□□□□ -1.2
RTTN-215ENST00000639487 C4orf32Q8N8J7 132 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms