RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 FANCCQ00597 558 aa13.16□□□□□ -0.3
LINC00538-201ENST00000626109 CDC37L1Q7L3B6 337 aa13.16□□□□□ -0.3
LINC00538-201ENST00000626109 SH3BP5LQ7L8J4 393 aa13.16□□□□□ -0.3
LINC00538-201ENST00000626109 KIAA1958Q8N8K9 716 aa13.16□□□□□ -0.3
LINC00538-201ENST00000626109 FAM212AQ96EL1 285 aa13.16□□□□□ -0.3
LINC00538-201ENST00000626109 MRFAP1L1Q96HT8 127 aa13.16□□□□□ -0.3
LINC00538-201ENST00000626109 NEK1Q96PY6 1258 aa13.16□□□□□ -0.3
LINC00538-201ENST00000626109 MAP7D2Q96T17 732 aa13.16□□□□□ -0.3
LINC00538-201ENST00000626109 PI4KBQ9UBF8 816 aa13.16□□□□□ -0.3
LINC00538-201ENST00000626109 USP25Q9UHP3 1055 aa13.16□□□□□ -0.3
LINC00538-201ENST00000626109 LAMB1P07942 1786 aa13.16□□□□□ -0.3
LINC00538-201ENST00000626109 VGLL3A8MV65 326 aa13.15□□□□□ -0.3
LINC00538-201ENST00000626109 ADM5C9JUS6 153 aa13.15□□□□□ -0.3
LINC00538-201ENST00000626109 MAPK1P28482 360 aa13.15□□□□□ -0.3
LINC00538-201ENST00000626109 CDC27P30260 824 aa13.15□□□□□ -0.3
LINC00538-201ENST00000626109 PLCD1P51178 756 aa13.15□□□□□ -0.3
LINC00538-201ENST00000626109 MDM2Q00987 491 aaPredicted RBP13.15□□□□□ -0.3
LINC00538-201ENST00000626109 CRACR2BQ8N4Y2 399 aaPredicted RBP13.15□□□□□ -0.3
LINC00538-201ENST00000626109 HOOK2Q96ED9 719 aa13.15□□□□□ -0.3
LINC00538-201ENST00000626109 EHD4Q9H223 541 aa13.15□□□□□ -0.3
LINC00538-201ENST00000626109 KIF3AQ9Y496 699 aa13.15□□□□□ -0.3
LINC00538-201ENST00000626109 ROBO3Q96MS0 1386 aa13.15□□□□□ -0.3
LINC00538-201ENST00000626109 PES1O00541 588 aaKnown RBP13.15□□□□□ -0.3
LINC00538-201ENST00000626109 CYP21A2P08686 494 aa13.15□□□□□ -0.3
LINC00538-201ENST00000626109 ST3GAL1Q11201 340 aa13.15□□□□□ -0.3
LINC00538-201ENST00000626109 MAP3K11Q16584 847 aa13.15□□□□□ -0.3
LINC00538-201ENST00000626109 INO80DQ53TQ3 878 aaPredicted RBP13.15□□□□□ -0.3
LINC00538-201ENST00000626109 MAP1SQ66K74 1059 aaPredicted RBP13.15□□□□□ -0.3
LINC00538-201ENST00000626109 SASS6Q6UVJ0 657 aa13.15□□□□□ -0.3
LINC00538-201ENST00000626109 ACRBPQ8NEB7 543 aa13.15□□□□□ -0.3
LINC00538-201ENST00000626109 TEPSINQ96N21 525 aa13.15□□□□□ -0.3
LINC00538-201ENST00000626109 FUCA2Q9BTY2 467 aa13.15□□□□□ -0.3
LINC00538-201ENST00000626109 PDCL3Q9H2J4 239 aa13.15□□□□□ -0.3
LINC00538-201ENST00000626109 ZSCAN16Q9H4T2 348 aaPredicted RBP13.15□□□□□ -0.3
LINC00538-201ENST00000626109 SERPINB13Q9UIV8 391 aa13.15□□□□□ -0.3
LINC00538-201ENST00000626109 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.15□□□□□ -0.3
LINC00538-201ENST00000626109 LAMA4Q16363 1823 aa13.14□□□□□ -0.31
LINC00538-201ENST00000626109 CLK1P49759 484 aaKnown RBP13.14□□□□□ -0.31
LINC00538-201ENST00000626109 CTDSPL2Q05D32 466 aa13.14□□□□□ -0.31
LINC00538-201ENST00000626109 TOB2Q14106 344 aaPredicted RBP13.14□□□□□ -0.31
LINC00538-201ENST00000626109 SUPT20HL1Q3ZLR7 823 aa13.14□□□□□ -0.31
LINC00538-201ENST00000626109 CHADLQ6NUI6 762 aa13.14□□□□□ -0.31
LINC00538-201ENST00000626109 RELL1Q8IUW5 271 aa13.14□□□□□ -0.31
LINC00538-201ENST00000626109 FOXP4Q8IVH2 680 aaPredicted RBP13.14□□□□□ -0.31
LINC00538-201ENST00000626109 MYRIPQ8NFW9 859 aa13.14□□□□□ -0.31
LINC00538-201ENST00000626109 RNPC3Q96LT9 517 aaKnown RBP13.14□□□□□ -0.31
LINC00538-201ENST00000626109 GLIS2Q9BZE0 524 aaPredicted RBP13.14□□□□□ -0.31
LINC00538-201ENST00000626109 NUP62CLQ9H1M0 184 aa13.14□□□□□ -0.31
LINC00538-201ENST00000626109 RNF41Q9H4P4 317 aaPredicted RBP13.14□□□□□ -0.31
LINC00538-201ENST00000626109 ZNF287Q9HBT7 754 aa13.14□□□□□ -0.31
LINC00538-201ENST00000626109 ENAMQ9NRM1 1142 aa13.14□□□□□ -0.31
LINC00538-201ENST00000626109 TYW1Q9NV66 732 aaKnown RBP13.14□□□□□ -0.31
LINC00538-201ENST00000626109 POLG2Q9UHN1 485 aa13.14□□□□□ -0.31
LINC00538-201ENST00000626109 KIF3CO14782 793 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 CAND2O75155 1236 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 NF2P35240 595 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 PDE4BQ07343 736 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 LRRC41Q15345 812 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 NBPF12Q5TAG4 269 aaPredicted RBP13.13□□□□□ -0.31
LINC00538-201ENST00000626109 DCAF15Q66K64 600 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 MTERF4Q7Z6M4 381 aaKnown RBP13.13□□□□□ -0.31
LINC00538-201ENST00000626109 CDAN1Q8IWY9 1227 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 STK11IPQ8N1F8 1099 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 BORCS6Q96GS4 357 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 LLPHQ9BRT6 129 aaKnown RBP13.13□□□□□ -0.31
LINC00538-201ENST00000626109 TMUB1Q9BVT8 246 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 DDX19AQ9NUU7 478 aaKnown RBP13.13□□□□□ -0.31
LINC00538-201ENST00000626109 CLIC5Q9NZA1 410 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 EVLQ9UI08 416 aaPredicted RBP13.13□□□□□ -0.31
LINC00538-201ENST00000626109 HERC5Q9UII4 1024 aaKnown RBP13.13□□□□□ -0.31
LINC00538-201ENST00000626109 CFAP45Q9UL16 551 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 SSUH2Q9Y2M2 353 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 MRPS23Q9Y3D9 190 aaKnown RBP13.13□□□□□ -0.31
LINC00538-201ENST00000626109 TMEM238LA0A1B0GVL6 79 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 DYNC1I1O14576 645 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 PCP11498 1178 aaKnown RBP13.13□□□□□ -0.31
LINC00538-201ENST00000626109 ZBED6P86452 979 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 EVX2Q03828 476 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 WASHC5Q12768 1159 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 GNL2Q13823 731 aaKnown RBP13.13□□□□□ -0.31
LINC00538-201ENST00000626109 E2F5Q15329 346 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 DNTTIP2Q5QJE6 756 aaKnown RBP13.13□□□□□ -0.31
LINC00538-201ENST00000626109 AKNAD1Q5T1N1 836 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 PRAMEF18Q5VWM3 479 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 MFSD6Q6ZSS7 791 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 C16orf86Q6ZW13 317 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 TBC1D10CQ8IV04 446 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 ZNF784Q8NCA9 323 aaPredicted RBP13.13□□□□□ -0.31
LINC00538-201ENST00000626109 PIBF1Q8WXW3 757 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 CDCA5Q96FF9 252 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 DYNLL2Q96FJ2 89 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 ALG2Q9H553 416 aa13.13□□□□□ -0.31
LINC00538-201ENST00000626109 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.13□□□□□ -0.31
LINC00538-201ENST00000626109 H3BQV1 296 aa13.12□□□□□ -0.31
LINC00538-201ENST00000626109 SMIM22K7EJ46 135 aa13.12□□□□□ -0.31
LINC00538-201ENST00000626109 CAVIN2O95810 425 aa13.12□□□□□ -0.31
LINC00538-201ENST00000626109 GABPAQ06546 454 aa13.12□□□□□ -0.31
LINC00538-201ENST00000626109 TRDNQ13061 729 aa13.12□□□□□ -0.31
LINC00538-201ENST00000626109 HIC1Q14526 733 aa13.12□□□□□ -0.31
LINC00538-201ENST00000626109 GJC2Q5T442 439 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms