RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 RBM28Q9NW13 759 aaKnown RBP19.91■□□□□ 0.78
PCF11-207ENST00000624931 PLA2G4AP47712 749 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 HIRAP54198 1017 aaPredicted RBP19.9■□□□□ 0.78
PCF11-207ENST00000624931 GPS2Q13227 327 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 PNOCQ13519 176 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 SEPT2Q15019 361 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 ANGEL2Q5VTE6 544 aaKnown RBP19.9■□□□□ 0.78
PCF11-207ENST00000624931 SPECC1LQ69YQ0 1117 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 TMEM139Q8IV31 216 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 RABGGTAQ92696 567 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 NAA15Q9BXJ9 866 aaKnown RBP19.9■□□□□ 0.78
PCF11-207ENST00000624931 FANCLQ9NW38 375 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.9■□□□□ 0.78
PCF11-207ENST00000624931 MAD2L2Q9UI95 211 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 CEP131Q9UPN4 1083 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 PCDHA5Q9Y5H7 936 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 VWA3AA6NCI4 1184 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 GH2P01242 217 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 ERCC5P28715 1186 aaPredicted RBP19.9■□□□□ 0.78
PCF11-207ENST00000624931 MMP14P50281 582 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 MDM2Q00987 491 aaPredicted RBP19.9■□□□□ 0.78
PCF11-207ENST00000624931 ABCB5Q2M3G0 1257 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 CCDC17Q96LX7 622 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 TEPSINQ96N21 525 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 CARD6Q9BX69 1037 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 UBXN6Q9BZV1 441 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 CPVLQ9H3G5 476 aa19.9■□□□□ 0.78
PCF11-207ENST00000624931 BAZ2BQ9UIF8 2168 aaKnown RBP19.89■□□□□ 0.77
PCF11-207ENST00000624931 USP17L5A8MUK1 530 aa19.89■□□□□ 0.77
PCF11-207ENST00000624931 POTEB2H3BUK9 544 aa19.89■□□□□ 0.77
PCF11-207ENST00000624931 TTLL1O95922 423 aa19.89■□□□□ 0.77
PCF11-207ENST00000624931 TNNI2P48788 182 aa19.89■□□□□ 0.77
PCF11-207ENST00000624931 RILPL1Q5EBL4 403 aa19.89■□□□□ 0.77
PCF11-207ENST00000624931 USP17L2Q6R6M4 530 aa19.89■□□□□ 0.77
PCF11-207ENST00000624931 TXLNBQ8N3L3 684 aa19.89■□□□□ 0.77
PCF11-207ENST00000624931 SHISA4Q96DD7 197 aa19.89■□□□□ 0.77
PCF11-207ENST00000624931 TSPYL1Q9H0U9 437 aa19.89■□□□□ 0.77
PCF11-207ENST00000624931 HERC5Q9UII4 1024 aaKnown RBP19.89■□□□□ 0.77
PCF11-207ENST00000624931 FRMPD2Q68DX3 1309 aaPredicted RBP19.89■□□□□ 0.77
PCF11-207ENST00000624931 ZNF18P17022 549 aa19.88■□□□□ 0.77
PCF11-207ENST00000624931 CDK11BP21127 795 aaKnown RBP19.88■□□□□ 0.77
PCF11-207ENST00000624931 LONRF3Q496Y0 759 aa19.88■□□□□ 0.77
PCF11-207ENST00000624931 TRIM22Q8IYM9 498 aa19.88■□□□□ 0.77
PCF11-207ENST00000624931 FOXP1Q9H334 677 aaPredicted RBP19.88■□□□□ 0.77
PCF11-207ENST00000624931 GGA3Q9NZ52 723 aa19.88■□□□□ 0.77
PCF11-207ENST00000624931 MRFAP1Q9Y605 127 aa19.88■□□□□ 0.77
PCF11-207ENST00000624931 EEF2P13639 858 aaKnown RBP19.88■□□□□ 0.77
PCF11-207ENST00000624931 PTPREP23469 700 aa19.88■□□□□ 0.77
PCF11-207ENST00000624931 SARSP49591 514 aaKnown RBP19.88■□□□□ 0.77
PCF11-207ENST00000624931 POSTNQ15063 836 aa19.88■□□□□ 0.77
PCF11-207ENST00000624931 PPP2R5BQ15173 497 aa19.88■□□□□ 0.77
PCF11-207ENST00000624931 PKN1Q16512 942 aa19.88■□□□□ 0.77
PCF11-207ENST00000624931 PRAMEF18Q5VWM3 479 aa19.88■□□□□ 0.77
PCF11-207ENST00000624931 RSRC2Q7L4I2 434 aaKnown RBP19.88■□□□□ 0.77
PCF11-207ENST00000624931 NOSTRINQ8IVI9 506 aa19.88■□□□□ 0.77
PCF11-207ENST00000624931 SMARCE1Q969G3 411 aa19.88■□□□□ 0.77
PCF11-207ENST00000624931 PANX2Q96RD6 677 aa19.88■□□□□ 0.77
PCF11-207ENST00000624931 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.88■□□□□ 0.77
PCF11-207ENST00000624931 V9GY48 417 aaPredicted RBP19.88■□□□□ 0.77
PCF11-207ENST00000624931 KIF5BP33176 963 aa19.87■□□□□ 0.77
PCF11-207ENST00000624931 GNG11P61952 73 aa19.87■□□□□ 0.77
PCF11-207ENST00000624931 ICA1Q05084 483 aa19.87■□□□□ 0.77
PCF11-207ENST00000624931 PPP2R3AQ06190 1150 aa19.87■□□□□ 0.77
PCF11-207ENST00000624931 BRD3Q15059 726 aa19.87■□□□□ 0.77
PCF11-207ENST00000624931 ISM2Q6H9L7 571 aa19.87■□□□□ 0.77
PCF11-207ENST00000624931 TMEM179Q6ZVK1 233 aa19.87■□□□□ 0.77
PCF11-207ENST00000624931 SIAH1Q8IUQ4 282 aa19.87■□□□□ 0.77
PCF11-207ENST00000624931 MSL3Q8N5Y2 521 aaKnown RBP19.87■□□□□ 0.77
PCF11-207ENST00000624931 GOLGA1Q92805 767 aa19.87■□□□□ 0.77
PCF11-207ENST00000624931 RNF26Q9BY78 433 aaPredicted RBP19.87■□□□□ 0.77
PCF11-207ENST00000624931 DEFB129Q9H1M3 183 aa19.87■□□□□ 0.77
PCF11-207ENST00000624931 ARFGAP3Q9NP61 516 aa19.87■□□□□ 0.77
PCF11-207ENST00000624931 MAN1B1Q9UKM7 699 aa19.87■□□□□ 0.77
PCF11-207ENST00000624931 PALM3A6NDB9 673 aaPredicted RBP19.86■□□□□ 0.77
PCF11-207ENST00000624931 DEXIO95424 95 aa19.86■□□□□ 0.77
PCF11-207ENST00000624931 PDHBP11177 359 aa19.86■□□□□ 0.77
PCF11-207ENST00000624931 VEGFAP15692 232 aaPredicted RBP19.86■□□□□ 0.77
PCF11-207ENST00000624931 TNFAIP1Q13829 316 aa19.86■□□□□ 0.77
PCF11-207ENST00000624931 MORC3Q14149 939 aa19.86■□□□□ 0.77
PCF11-207ENST00000624931 LRRN4CLQ8ND94 238 aa19.86■□□□□ 0.77
PCF11-207ENST00000624931 KCNJ14Q9UNX9 436 aa19.86■□□□□ 0.77
PCF11-207ENST00000624931 PRPF3O43395 683 aaKnown RBP19.85■□□□□ 0.77
PCF11-207ENST00000624931 NBPF12Q5TAG4 269 aaPredicted RBP19.85■□□□□ 0.77
PCF11-207ENST00000624931 CC2D1AQ6P1N0 951 aaPredicted RBP19.85■□□□□ 0.77
PCF11-207ENST00000624931 CCDC84Q86UT8 332 aaPredicted RBP19.85■□□□□ 0.77
PCF11-207ENST00000624931 ATAD5Q96QE3 1844 aa19.85■□□□□ 0.77
PCF11-207ENST00000624931 CYTH3O43739 400 aa19.85■□□□□ 0.77
PCF11-207ENST00000624931 MMP1P03956 469 aa19.85■□□□□ 0.77
PCF11-207ENST00000624931 TUBBP07437 444 aa19.85■□□□□ 0.77
PCF11-207ENST00000624931 PARP1P09874 1014 aaKnown RBP19.85■□□□□ 0.77
PCF11-207ENST00000624931 CCDC175P0C221 793 aa19.85■□□□□ 0.77
PCF11-207ENST00000624931 DLK2Q6UY11 383 aa19.85■□□□□ 0.77
PCF11-207ENST00000624931 TC2NQ8N9U0 490 aa19.85■□□□□ 0.77
PCF11-207ENST00000624931 CTAGE1Q96RT6 745 aa19.85■□□□□ 0.77
PCF11-207ENST00000624931 KANSL2Q9H9L4 492 aa19.85■□□□□ 0.77
PCF11-207ENST00000624931 VPS54Q9P1Q0 977 aa19.85■□□□□ 0.77
PCF11-207ENST00000624931 ZBTB21Q9ULJ3 1066 aa19.85■□□□□ 0.77
PCF11-207ENST00000624931 NFE2L3Q9Y4A8 694 aa19.85■□□□□ 0.77
PCF11-207ENST00000624931 TMEM232C9JQI7 657 aa19.84■□□□□ 0.77
PCF11-207ENST00000624931 KLRF2D3W0D1 207 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms