RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 RRAGBQ5VZM2 374 aa24.04■■□□□ 1.44
LIME1-210ENST00000621325 CCDC150Q8NCX0 1101 aa24.04■■□□□ 1.44
LIME1-210ENST00000621325 TRIM34Q9BYJ4 488 aa24.04■■□□□ 1.44
LIME1-210ENST00000621325 CCSER1Q9C0I3 900 aa24.04■■□□□ 1.44
LIME1-210ENST00000621325 SYNRGQ9UMZ2 1314 aa24.04■■□□□ 1.44
LIME1-210ENST00000621325 TTLL6Q8N841 843 aa24.03■■□□□ 1.44
LIME1-210ENST00000621325 KANSL2Q9H9L4 492 aa24.03■■□□□ 1.44
LIME1-210ENST00000621325 NPM3O75607 178 aaKnown RBP24.03■■□□□ 1.44
LIME1-210ENST00000621325 RAD17O75943 681 aa24.03■■□□□ 1.44
LIME1-210ENST00000621325 TPD52L1Q16890 204 aaPredicted RBP24.03■■□□□ 1.44
LIME1-210ENST00000621325 RPN1P04843 607 aaKnown RBP24.02■■□□□ 1.44
LIME1-210ENST00000621325 TECP42680 631 aa24.02■■□□□ 1.44
LIME1-210ENST00000621325 SPATA1Q5VX52 437 aa24.02■■□□□ 1.44
LIME1-210ENST00000621325 MKL1Q969V6 931 aa24.02■■□□□ 1.44
LIME1-210ENST00000621325 ZNF277Q9NRM2 450 aaPredicted RBP24.02■■□□□ 1.44
LIME1-210ENST00000621325 CTNND2Q9UQB3 1225 aa24.02■■□□□ 1.44
LIME1-210ENST00000621325 ZBTB5O15062 677 aa24.02■■□□□ 1.44
LIME1-210ENST00000621325 TDP2O95551 362 aa24.02■■□□□ 1.44
LIME1-210ENST00000621325 RRP1BQ14684 758 aaKnown RBP24.02■■□□□ 1.44
LIME1-210ENST00000621325 MTMR8Q96EF0 704 aa24.02■■□□□ 1.44
LIME1-210ENST00000621325 TRMT1Q9NXH9 659 aaKnown RBP24.02■■□□□ 1.44
LIME1-210ENST00000621325 NYAP2Q9P242 653 aa24.02■■□□□ 1.44
LIME1-210ENST00000621325 SLC37A4O43826 429 aa24.01■■□□□ 1.43
LIME1-210ENST00000621325 DPEP1P16444 411 aa24.01■■□□□ 1.43
LIME1-210ENST00000621325 SLC1A4P43007 532 aa24.01■■□□□ 1.43
LIME1-210ENST00000621325 SLFN13Q68D06 897 aa24.01■■□□□ 1.43
LIME1-210ENST00000621325 RIC8AQ9NPQ8 531 aa24.01■■□□□ 1.43
LIME1-210ENST00000621325 GDAQ9Y2T3 454 aa24.01■■□□□ 1.43
LIME1-210ENST00000621325 KIF20AO95235 890 aa24.01■■□□□ 1.43
LIME1-210ENST00000621325 KCNA3P22001 575 aa24.01■■□□□ 1.43
LIME1-210ENST00000621325 TNNI2P48788 182 aa24.01■■□□□ 1.43
LIME1-210ENST00000621325 ICA1Q05084 483 aa24.01■■□□□ 1.43
LIME1-210ENST00000621325 CABP7Q86V35 215 aa24.01■■□□□ 1.43
LIME1-210ENST00000621325 MAPK8IP1Q9UQF2 711 aa24.01■■□□□ 1.43
LIME1-210ENST00000621325 PLCG1P19174 1290 aa24■■□□□ 1.43
LIME1-210ENST00000621325 TXKP42681 527 aa24■■□□□ 1.43
LIME1-210ENST00000621325 ABCB5Q2M3G0 1257 aa24■■□□□ 1.43
LIME1-210ENST00000621325 CCDC93Q567U6 631 aa24■■□□□ 1.43
LIME1-210ENST00000621325 CT47A1Q5JQC4 288 aaPredicted RBP24■■□□□ 1.43
LIME1-210ENST00000621325 APTXQ7Z2E3 356 aaKnown RBP24■■□□□ 1.43
LIME1-210ENST00000621325 COL4A5P29400 1685 aa24■■□□□ 1.43
LIME1-210ENST00000621325 CLRN2A0PK11 232 aa24■■□□□ 1.43
LIME1-210ENST00000621325 PRIMPOLQ96LW4 560 aa24■■□□□ 1.43
LIME1-210ENST00000621325 NUP88Q99567 741 aaPredicted RBP24■■□□□ 1.43
LIME1-210ENST00000621325 ZBTB12Q9Y330 459 aaPredicted RBP24■■□□□ 1.43
LIME1-210ENST00000621325 TCP10L2B9ZVM9 353 aa23.99■■□□□ 1.43
LIME1-210ENST00000621325 PSMD14O00487 310 aa23.99■■□□□ 1.43
LIME1-210ENST00000621325 ENTPD3O75355 529 aa23.99■■□□□ 1.43
LIME1-210ENST00000621325 TMEM179Q6ZVK1 233 aa23.99■■□□□ 1.43
LIME1-210ENST00000621325 AK8Q96MA6 479 aa23.99■■□□□ 1.43
LIME1-210ENST00000621325 MTMR9Q96QG7 549 aa23.99■■□□□ 1.43
LIME1-210ENST00000621325 CSRNP1Q96S65 589 aa23.99■■□□□ 1.43
LIME1-210ENST00000621325 MMTAG2Q9BU76 263 aaKnown RBP23.99■■□□□ 1.43
LIME1-210ENST00000621325 KBTBD4Q9NVX7 518 aa23.99■■□□□ 1.43
LIME1-210ENST00000621325 ATRNL1Q5VV63 1379 aa23.99■■□□□ 1.43
LIME1-210ENST00000621325 TNNT1P13805 278 aa23.99■■□□□ 1.43
LIME1-210ENST00000621325 QRICH1Q2TAL8 776 aa23.99■■□□□ 1.43
LIME1-210ENST00000621325 ZNF658Q5TYW1 1059 aaPredicted RBP23.99■■□□□ 1.43
LIME1-210ENST00000621325 PPP1R18Q6NYC8 613 aa23.99■■□□□ 1.43
LIME1-210ENST00000621325 RSBN1LQ6PCB5 846 aaPredicted RBP23.99■■□□□ 1.43
LIME1-210ENST00000621325 CCAR2Q8N163 923 aaKnown RBP23.99■■□□□ 1.43
LIME1-210ENST00000621325 LARGE2Q8N3Y3 721 aa23.99■■□□□ 1.43
LIME1-210ENST00000621325 MYRIPQ8NFW9 859 aa23.99■■□□□ 1.43
LIME1-210ENST00000621325 GH2P01242 217 aa23.98■■□□□ 1.43
LIME1-210ENST00000621325 CLK2P49760 499 aaKnown RBP23.98■■□□□ 1.43
LIME1-210ENST00000621325 CDKAL1Q5VV42 579 aa23.98■■□□□ 1.43
LIME1-210ENST00000621325 SNAP25P60880 206 aa23.98■■□□□ 1.43
LIME1-210ENST00000621325 E4F1Q66K89 784 aaPredicted RBP23.98■■□□□ 1.43
LIME1-210ENST00000621325 GTPBP4Q9BZE4 634 aaKnown RBP23.98■■□□□ 1.43
LIME1-210ENST00000621325 SPDYE2BA6NHP3 402 aa23.97■■□□□ 1.43
LIME1-210ENST00000621325 F5H6K3 240 aa23.97■■□□□ 1.43
LIME1-210ENST00000621325 SPDYE6P0CI01 402 aa23.97■■□□□ 1.43
LIME1-210ENST00000621325 CBX1P83916 185 aa23.97■■□□□ 1.43
LIME1-210ENST00000621325 KLRC3Q07444 240 aa23.97■■□□□ 1.43
LIME1-210ENST00000621325 NR1I3Q14994 352 aa23.97■■□□□ 1.43
LIME1-210ENST00000621325 CALCRLQ16602 461 aa23.97■■□□□ 1.43
LIME1-210ENST00000621325 RTKN2Q8IZC4 609 aa23.97■■□□□ 1.43
LIME1-210ENST00000621325 IGSF22Q8N9C0 903 aa23.97■■□□□ 1.43
LIME1-210ENST00000621325 DCAF4Q8WV16 495 aa23.97■■□□□ 1.43
LIME1-210ENST00000621325 CUL5Q93034 780 aa23.97■■□□□ 1.43
LIME1-210ENST00000621325 PSTPIP2Q9H939 334 aa23.97■■□□□ 1.43
LIME1-210ENST00000621325 TEX33O43247 280 aa23.96■■□□□ 1.43
LIME1-210ENST00000621325 KLRC4O43908 158 aa23.96■■□□□ 1.43
LIME1-210ENST00000621325 PRCPP42785 496 aa23.96■■□□□ 1.43
LIME1-210ENST00000621325 RMND1Q9NWS8 449 aa23.96■■□□□ 1.43
LIME1-210ENST00000621325 A0A1B0GTH6 734 aa23.96■■□□□ 1.43
LIME1-210ENST00000621325 TBX2Q13207 712 aaPredicted RBP23.96■■□□□ 1.43
LIME1-210ENST00000621325 CDC37Q16543 378 aaPredicted RBP23.96■■□□□ 1.43
LIME1-210ENST00000621325 KMT5BQ4FZB7 885 aa23.96■■□□□ 1.43
LIME1-210ENST00000621325 GMLQ99445 158 aa23.96■■□□□ 1.43
LIME1-210ENST00000621325 PSMD1Q99460 953 aa23.96■■□□□ 1.43
LIME1-210ENST00000621325 USP17L15C9J2P7 530 aa23.95■■□□□ 1.43
LIME1-210ENST00000621325 USP17L13C9JLJ4 530 aa23.95■■□□□ 1.43
LIME1-210ENST00000621325 USP17L11C9JVI0 530 aa23.95■■□□□ 1.43
LIME1-210ENST00000621325 USP17L18D6R9N7 530 aa23.95■■□□□ 1.43
LIME1-210ENST00000621325 USP17L22D6RA61 530 aa23.95■■□□□ 1.43
LIME1-210ENST00000621325 USP17L17D6RBQ6 530 aa23.95■■□□□ 1.43
LIME1-210ENST00000621325 USP17L19D6RCP7 530 aa23.95■■□□□ 1.43
LIME1-210ENST00000621325 USP17L20D6RJB6 530 aa23.95■■□□□ 1.43
LIME1-210ENST00000621325 NDUFB10O96000 172 aa23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms