RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 NT5C2P49902 561 aa20.14■□□□□ 0.81
HMGN3-203ENST00000620514 PTH1RQ03431 593 aa20.14■□□□□ 0.81
HMGN3-203ENST00000620514 ENAHQ8N8S7 591 aaPredicted RBP20.14■□□□□ 0.81
HMGN3-203ENST00000620514 PNMA1Q8ND90 353 aa20.14■□□□□ 0.81
HMGN3-203ENST00000620514 KLHDC9Q8NEP7 349 aa20.14■□□□□ 0.81
HMGN3-203ENST00000620514 ANKS1AQ92625 1134 aa20.14■□□□□ 0.81
HMGN3-203ENST00000620514 KRT23Q9C075 422 aa20.14■□□□□ 0.81
HMGN3-203ENST00000620514 UBA5Q9GZZ9 404 aa20.14■□□□□ 0.81
HMGN3-203ENST00000620514 LCTP09848 1927 aa20.14■□□□□ 0.81
HMGN3-203ENST00000620514 TNKSO95271 1327 aa20.13■□□□□ 0.81
HMGN3-203ENST00000620514 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.13■□□□□ 0.81
HMGN3-203ENST00000620514 BAATQ14032 418 aaPredicted RBP20.13■□□□□ 0.81
HMGN3-203ENST00000620514 CCDC178Q5BJE1 867 aa20.13■□□□□ 0.81
HMGN3-203ENST00000620514 LRCH3Q96II8 777 aa20.13■□□□□ 0.81
HMGN3-203ENST00000620514 KAT14Q9H8E8 782 aa20.13■□□□□ 0.81
HMGN3-203ENST00000620514 DNAH12Q6ZR08 3092 aa20.13■□□□□ 0.81
HMGN3-203ENST00000620514 ASB14A6NK59 587 aa20.12■□□□□ 0.81
HMGN3-203ENST00000620514 ACLYP53396 1101 aa20.12■□□□□ 0.81
HMGN3-203ENST00000620514 KCNA10Q16322 511 aa20.12■□□□□ 0.81
HMGN3-203ENST00000620514 GPATCH4Q5T3I0 446 aaKnown RBP20.12■□□□□ 0.81
HMGN3-203ENST00000620514 C1orf53Q5VUE5 145 aa20.12■□□□□ 0.81
HMGN3-203ENST00000620514 CCSAPQ6IQ19 270 aaPredicted RBP20.12■□□□□ 0.81
HMGN3-203ENST00000620514 CYB5R4Q7L1T6 521 aa20.12■□□□□ 0.81
HMGN3-203ENST00000620514 SH3RF1Q7Z6J0 888 aa20.12■□□□□ 0.81
HMGN3-203ENST00000620514 RUFY2Q8WXA3 655 aa20.12■□□□□ 0.81
HMGN3-203ENST00000620514 CLEC4DQ8WXI8 215 aa20.12■□□□□ 0.81
HMGN3-203ENST00000620514 TSEN34Q9BSV6 310 aaKnown RBP20.12■□□□□ 0.81
HMGN3-203ENST00000620514 PRDM5Q9NQX1 630 aaPredicted RBP20.12■□□□□ 0.81
HMGN3-203ENST00000620514 LRRC37A2A6NM11 1700 aa20.11■□□□□ 0.81
HMGN3-203ENST00000620514 C6orf222P0C671 652 aaPredicted RBP20.11■□□□□ 0.81
HMGN3-203ENST00000620514 PTGS1P23219 599 aa20.11■□□□□ 0.81
HMGN3-203ENST00000620514 TLE2Q04725 743 aa20.11■□□□□ 0.81
HMGN3-203ENST00000620514 SLC30A10Q6XR72 485 aa20.11■□□□□ 0.81
HMGN3-203ENST00000620514 EEPD1Q7L9B9 569 aa20.11■□□□□ 0.81
HMGN3-203ENST00000620514 TDHQ8IZJ6 230 aa20.11■□□□□ 0.81
HMGN3-203ENST00000620514 UPF3AQ9H1J1 476 aaKnown RBP20.11■□□□□ 0.81
HMGN3-203ENST00000620514 CNNM2Q9H8M5 875 aa20.11■□□□□ 0.81
HMGN3-203ENST00000620514 PDLIM7Q9NR12 457 aa20.11■□□□□ 0.81
HMGN3-203ENST00000620514 PDGFCQ9NRA1 345 aa20.11■□□□□ 0.81
HMGN3-203ENST00000620514 PRKAG2Q9UGJ0 569 aa20.11■□□□□ 0.81
HMGN3-203ENST00000620514 TAF6LQ9Y6J9 622 aa20.11■□□□□ 0.81
HMGN3-203ENST00000620514 PTPDC1A2A3K4 754 aa20.1■□□□□ 0.81
HMGN3-203ENST00000620514 TRIM43BA6NCK2 446 aa20.1■□□□□ 0.81
HMGN3-203ENST00000620514 SGSM2O43147 1006 aa20.1■□□□□ 0.81
HMGN3-203ENST00000620514 CYP21A2P08686 494 aa20.1■□□□□ 0.81
HMGN3-203ENST00000620514 CST5P28325 142 aaPredicted RBP20.1■□□□□ 0.81
HMGN3-203ENST00000620514 GJA9P57773 515 aa20.1■□□□□ 0.81
HMGN3-203ENST00000620514 TNFAIP2Q03169 654 aa20.1■□□□□ 0.81
HMGN3-203ENST00000620514 FBXO16Q8IX29 292 aaPredicted RBP20.1■□□□□ 0.81
HMGN3-203ENST00000620514 TRIM43Q96BQ3 446 aaPredicted RBP20.1■□□□□ 0.81
HMGN3-203ENST00000620514 LBHD1Q9BQE6 289 aaPredicted RBP20.1■□□□□ 0.81
HMGN3-203ENST00000620514 UBAC1Q9BSL1 405 aa20.1■□□□□ 0.81
HMGN3-203ENST00000620514 LTBP2Q14767 1821 aa20.09■□□□□ 0.81
HMGN3-203ENST00000620514 WDR19Q8NEZ3 1342 aa20.09■□□□□ 0.81
HMGN3-203ENST00000620514 MOXD2PA6NHM9 499 aa20.09■□□□□ 0.81
HMGN3-203ENST00000620514 CTAGE5O15320 804 aa20.09■□□□□ 0.81
HMGN3-203ENST00000620514 CALML3P27482 149 aa20.09■□□□□ 0.81
HMGN3-203ENST00000620514 SEC23AQ15436 765 aa20.09■□□□□ 0.81
HMGN3-203ENST00000620514 USH1GQ495M9 461 aa20.09■□□□□ 0.81
HMGN3-203ENST00000620514 TMEM63BQ5T3F8 832 aa20.09■□□□□ 0.81
HMGN3-203ENST00000620514 NOL8Q76FK4 1167 aaKnown RBP20.09■□□□□ 0.81
HMGN3-203ENST00000620514 STARD7Q9NQZ5 370 aa20.09■□□□□ 0.81
HMGN3-203ENST00000620514 SZT2Q5T011 3432 aa20.08■□□□□ 0.81
HMGN3-203ENST00000620514 PQBP1O60828 265 aaKnown RBP20.08■□□□□ 0.81
HMGN3-203ENST00000620514 ASGR1P07306 291 aa20.08■□□□□ 0.81
HMGN3-203ENST00000620514 ALDH5A1P51649 535 aaPredicted RBP20.08■□□□□ 0.81
HMGN3-203ENST00000620514 BEX3Q00994 111 aa20.08■□□□□ 0.81
HMGN3-203ENST00000620514 CDC37Q16543 378 aaPredicted RBP20.08■□□□□ 0.81
HMGN3-203ENST00000620514 GNASQ5JWF2 1037 aa20.08■□□□□ 0.81
HMGN3-203ENST00000620514 TAPT1Q6NXT6 567 aa20.08■□□□□ 0.81
HMGN3-203ENST00000620514 RNF207Q6ZRF8 634 aa20.08■□□□□ 0.81
HMGN3-203ENST00000620514 SKAP1Q86WV1 359 aa20.08■□□□□ 0.81
HMGN3-203ENST00000620514 ADGRF4Q8IZF3 695 aa20.08■□□□□ 0.81
HMGN3-203ENST00000620514 MORC4Q8TE76 937 aa20.08■□□□□ 0.81
HMGN3-203ENST00000620514 SPC25Q9HBM1 224 aa20.08■□□□□ 0.81
HMGN3-203ENST00000620514 PNMA2Q9UL42 364 aa20.08■□□□□ 0.81
HMGN3-203ENST00000620514 GNEQ9Y223 722 aaKnown RBP20.08■□□□□ 0.81
HMGN3-203ENST00000620514 U3KPZ7 1027 aaPredicted RBP20.08■□□□□ 0.81
HMGN3-203ENST00000620514 PARP1P09874 1014 aaKnown RBP20.07■□□□□ 0.8
HMGN3-203ENST00000620514 SMPD1P17405 629 aa20.07■□□□□ 0.8
HMGN3-203ENST00000620514 RPS6P62753 249 aaKnown RBP20.07■□□□□ 0.8
HMGN3-203ENST00000620514 ASPRV1Q53RT3 343 aa20.07■□□□□ 0.8
HMGN3-203ENST00000620514 IFIT1BQ5T764 474 aaKnown RBP20.07■□□□□ 0.8
HMGN3-203ENST00000620514 PCSK9Q8NBP7 692 aaKnown RBP20.07■□□□□ 0.8
HMGN3-203ENST00000620514 NUP133Q8WUM0 1156 aa20.07■□□□□ 0.8
HMGN3-203ENST00000620514 BADQ92934 168 aa20.07■□□□□ 0.8
HMGN3-203ENST00000620514 ADD3Q9UEY8 706 aaKnown RBP20.07■□□□□ 0.8
HMGN3-203ENST00000620514 CLTBP09497 229 aa20.06■□□□□ 0.8
HMGN3-203ENST00000620514 ITGB8P26012 769 aa20.06■□□□□ 0.8
HMGN3-203ENST00000620514 TRDNQ13061 729 aa20.06■□□□□ 0.8
HMGN3-203ENST00000620514 LRIT3Q3SXY7 679 aa20.06■□□□□ 0.8
HMGN3-203ENST00000620514 STOX1Q6ZVD7 989 aa20.06■□□□□ 0.8
HMGN3-203ENST00000620514 TLK2Q86UE8 772 aa20.06■□□□□ 0.8
HMGN3-203ENST00000620514 STAG2Q8N3U4 1231 aa20.06■□□□□ 0.8
HMGN3-203ENST00000620514 VAT1LQ9HCJ6 419 aa20.06■□□□□ 0.8
HMGN3-203ENST00000620514 VTA1Q9NP79 307 aa20.06■□□□□ 0.8
HMGN3-203ENST00000620514 LAMA3Q16787 3333 aa20.05■□□□□ 0.8
HMGN3-203ENST00000620514 E7EWF7 191 aa20.05■□□□□ 0.8
HMGN3-203ENST00000620514 DYNC1LI2O43237 492 aaPredicted RBP20.05■□□□□ 0.8
HMGN3-203ENST00000620514 NKX3-2P78367 333 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms