RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 SMAPO00193 183 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 TSPY3P0CV98 308 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 TSPY8P0CW00 308 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 PFKFB1P16118 471 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 FOXD4Q12950 439 aaPredicted RBP6.22□□□□□ -1.41
CPNE4-214ENST00000617767 SAFBQ15424 915 aaKnown RBP eCLIP6.22□□□□□ -1.41
CPNE4-214ENST00000617767 ZNF174Q15697 407 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 AOPEPQ8N6M6 819 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 TDRD7Q8NHU6 1098 aaKnown RBP6.22□□□□□ -1.41
CPNE4-214ENST00000617767 TBC1D16Q8TBP0 767 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 SHISA4Q96DD7 197 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 RBM17Q96I25 401 aaKnown RBP6.22□□□□□ -1.41
CPNE4-214ENST00000617767 PLIN2Q99541 437 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 FUCA2Q9BTY2 467 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 FAM107BQ9H098 131 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 DDX19AQ9NUU7 478 aaKnown RBP6.22□□□□□ -1.41
CPNE4-214ENST00000617767 FAN1Q9Y2M0 1017 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.22□□□□□ -1.41
CPNE4-214ENST00000617767 CAPN7Q9Y6W3 813 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 ATRNO75882 1429 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 POLRMTO00411 1230 aaKnown RBP6.22□□□□□ -1.41
CPNE4-214ENST00000617767 ZNF202O95125 648 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 RTN3O95197 1032 aaPredicted RBP6.22□□□□□ -1.41
CPNE4-214ENST00000617767 CA8P35219 290 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 FAM160A1Q05DH4 1040 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 PDIA5Q14554 519 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 ARID5BQ14865 1188 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 ALX1Q15699 326 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 DPCR1Q3MIW9 517 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 CRACR2BQ8N4Y2 399 aaPredicted RBP6.22□□□□□ -1.41
CPNE4-214ENST00000617767 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.22□□□□□ -1.41
CPNE4-214ENST00000617767 ZCWPW1Q9H0M4 648 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 MMADHCQ9H3L0 296 aaPredicted RBP6.22□□□□□ -1.41
CPNE4-214ENST00000617767 PDE11AQ9HCR9 933 aa6.22□□□□□ -1.41
CPNE4-214ENST00000617767 RTL9Q8NET4 1388 aa6.21□□□□□ -1.41
CPNE4-214ENST00000617767 GOLGA6L19H0YKK7 550 aa6.21□□□□□ -1.41
CPNE4-214ENST00000617767 CAVIN2O95810 425 aa6.21□□□□□ -1.41
CPNE4-214ENST00000617767 RPSAP08865 295 aaKnown RBP6.21□□□□□ -1.41
CPNE4-214ENST00000617767 INPP5BP32019 993 aa6.21□□□□□ -1.41
CPNE4-214ENST00000617767 LIFRP42702 1097 aa6.21□□□□□ -1.41
CPNE4-214ENST00000617767 EVCP57679 992 aa6.21□□□□□ -1.41
CPNE4-214ENST00000617767 SHROOM1Q2M3G4 852 aaPredicted RBP6.21□□□□□ -1.41
CPNE4-214ENST00000617767 CDCA2Q69YH5 1023 aaPredicted RBP6.21□□□□□ -1.41
CPNE4-214ENST00000617767 SGMS1Q86VZ5 419 aa6.21□□□□□ -1.41
CPNE4-214ENST00000617767 FAM200AQ8TCP9 573 aa6.21□□□□□ -1.41
CPNE4-214ENST00000617767 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.21□□□□□ -1.41
CPNE4-214ENST00000617767 FAM169AQ9Y6X4 670 aa6.21□□□□□ -1.41
CPNE4-214ENST00000617767 MYH15Q9Y2K3 1946 aa6.21□□□□□ -1.41
CPNE4-214ENST00000617767 DOCK2Q92608 1830 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 LRP5O75197 1615 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 PPEF1O14829 653 aaPredicted RBP6.21□□□□□ -1.42
CPNE4-214ENST00000617767 N4BP1O75113 896 aaKnown RBP6.21□□□□□ -1.42
CPNE4-214ENST00000617767 PHACTR2O75167 634 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 ATP6V1G1O75348 118 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 SYKP43405 635 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 AFMP43652 599 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 PDE4BQ07343 736 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 PIK3AP1Q6ZUJ8 805 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 SAPCD2Q86UD0 394 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 ZNF444Q8N0Y2 327 aaPredicted RBP6.21□□□□□ -1.42
CPNE4-214ENST00000617767 LRRC47Q8N1G4 583 aaKnown RBP6.21□□□□□ -1.42
CPNE4-214ENST00000617767 NME8Q8N427 588 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 SRBD1Q8N5C6 995 aaKnown RBP6.21□□□□□ -1.42
CPNE4-214ENST00000617767 CNNM3Q8NE01 707 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 LMBR1Q8WVP7 490 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 FUT8Q9BYC5 575 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 ZC3H12CQ9C0D7 883 aaKnown RBP6.21□□□□□ -1.42
CPNE4-214ENST00000617767 CENPHQ9H3R5 247 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 ARFGAP3Q9NP61 516 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 TMOD4Q9NZQ9 345 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 TTF2Q9UNY4 1162 aaKnown RBP6.21□□□□□ -1.42
CPNE4-214ENST00000617767 MAPK8IP1Q9UQF2 711 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 FRMPD2Q68DX3 1309 aaPredicted RBP6.21□□□□□ -1.42
CPNE4-214ENST00000617767 CCDC88AQ3V6T2 1871 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 MCM7P33993 719 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 TOB1P50616 345 aaPredicted RBP6.21□□□□□ -1.42
CPNE4-214ENST00000617767 SLC7A5Q01650 507 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 SEC23AQ15436 765 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 CCDC144BQ3MJ40 725 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 USP17L2Q6R6M4 530 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 SHC4Q6S5L8 630 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 DPP8Q6V1X1 898 aaPredicted RBP6.21□□□□□ -1.42
CPNE4-214ENST00000617767 HEATR3Q7Z4Q2 680 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 TMEM110Q86TL2 294 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 NOSTRINQ8IVI9 506 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 ZSCAN29Q8IWY8 852 aaPredicted RBP6.21□□□□□ -1.42
CPNE4-214ENST00000617767 C17orf50Q8WW18 174 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 EPAS1Q99814 870 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 UBA5Q9GZZ9 404 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 KAT14Q9H8E8 782 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 L2HGDHQ9H9P8 463 aa6.21□□□□□ -1.42
CPNE4-214ENST00000617767 ARAP2Q8WZ64 1704 aa6.2□□□□□ -1.42
CPNE4-214ENST00000617767 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.2□□□□□ -1.42
CPNE4-214ENST00000617767 POLR2DO15514 142 aaKnown RBP6.2□□□□□ -1.42
CPNE4-214ENST00000617767 MMP1P03956 469 aa6.2□□□□□ -1.42
CPNE4-214ENST00000617767 SLC3A2P08195 630 aaKnown RBP6.2□□□□□ -1.42
CPNE4-214ENST00000617767 ZNF24P17028 368 aa6.2□□□□□ -1.42
CPNE4-214ENST00000617767 IFNAR1P17181 557 aa6.2□□□□□ -1.42
CPNE4-214ENST00000617767 LMOD1P29536 600 aaPredicted RBP6.2□□□□□ -1.42
CPNE4-214ENST00000617767 NLRP5P59047 1200 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms