RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 HMGCS2P54868 508 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 KIF23Q02241 960 aaPredicted RBP11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 KLRC3Q07444 240 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 MTERF2Q49AM1 385 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 MAP9Q49MG5 647 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 APBB1IPQ7Z5R6 666 aaPredicted RBP11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 ZBTB8OSQ8IWT0 167 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 ENAHQ8N8S7 591 aaPredicted RBP11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 PCDHB6Q9Y5E3 794 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 CTAGE15A4D2H0 777 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 SMIM23A6NLE4 172 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 CTAGE8P0CG41 777 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 ARL1P40616 181 aaPredicted RBP11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 NLRP12P59046 1061 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 OSTNP61366 133 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 RC3H1Q5TC82 1133 aaKnown RBP11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 CTR9Q6PD62 1173 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 RRAGAQ7L523 313 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 CTAGE6Q86UF2 777 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 CTAGE4Q8IX94 777 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 CEP170P1Q96L14 293 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 MMS19Q96T76 1030 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 NRKQ7Z2Y5 1582 aa11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 RIMS1Q86UR5 1692 aaKnown RBP11.24□□□□□ -0.61
SMARCA1-205ENST00000617310 SLC8A3P57103 927 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 MCM6Q14566 821 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 PDIA6Q15084 440 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 SLC7A3Q8WY07 619 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 PANK4Q9NVE7 773 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 DAGLAQ9Y4D2 1042 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 RGS12O14924 1447 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 USP42Q9H9J4 1324 aaKnown RBP11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 PPARDQ03181 441 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 SNRNP48Q6IEG0 339 aaKnown RBP11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 ARMCX5Q6P1M9 558 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 NBPF3Q9H094 633 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 ADD3Q9UEY8 706 aaKnown RBP11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 PRPF6O94906 941 aaKnown RBP11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 RHOXF2BP0C7M4 288 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 LIFRP42702 1097 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 YARSP54577 528 aaKnown RBP11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 ADKP55263 362 aaKnown RBP11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 SF3B3Q15393 1217 aaKnown RBP11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 DGKHQ86XP1 1220 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 CDAN1Q8IWY9 1227 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 SLFN12Q8IYM2 578 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 MSANTD4Q8NCY6 345 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 SLF1Q9BQI6 1058 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 RHOXF2Q9BQY4 288 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 XPO4Q9C0E2 1151 aaKnown RBP11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 AP5M1Q9H0R1 490 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 MYO1AQ9UBC5 1043 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 KDM3AQ9Y4C1 1321 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 QRICH2Q9H0J4 1663 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 FSD2A1L4K1 749 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 CTAGE9A4FU28 777 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 ABCB4P21439 1286 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 NFX1Q12986 1120 aaKnown RBP11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 RABL6Q3YEC7 729 aaPredicted RBP11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 ANGEL2Q5VTE6 544 aaKnown RBP11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 KRBA2Q6ZNG9 492 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 PPM1KQ8N3J5 372 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 ADPGKQ9BRR6 497 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 GGA3Q9NZ52 723 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 ARMCX3Q9UH62 379 aaPredicted RBP11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 ZKSCAN5Q9Y2L8 839 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 TTLL3Q9Y4R7 772 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 AGLP35573 1532 aa11.23□□□□□ -0.61
SMARCA1-205ENST00000617310 UTYO14607 1347 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 XRCC5P13010 732 aaKnown RBP11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 EZRP15311 586 aaKnown RBP11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 CMA1P23946 247 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 TMOD1P28289 359 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 KLHL30Q0D2K2 578 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 PDXDC2PQ6P474 469 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 DCUN1D2Q6PH85 259 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 POMGNT1Q8WZA1 660 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 SELENOOQ9BVL4 669 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 PLEKHA4Q9H4M7 779 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 GYS1P13807 737 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 IRX5P78411 483 aaPredicted RBP11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 INTS5Q6P9B9 1019 aaKnown RBP11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 NSUN4Q96CB9 384 aaKnown RBP11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 EPSTI1Q96J88 318 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 FANCLQ9NW38 375 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 CTTNBP2NLQ9P2B4 639 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 DIP2AQ14689 1571 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 MYO3AQ8NEV4 1616 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 PPP1R2P41236 205 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 MAGEA1P43355 309 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 SLC39A14Q15043 492 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 ASIC2Q16515 512 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 TYW1BQ6NUM6 668 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 RNF207Q6ZRF8 634 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 MTERF4Q7Z6M4 381 aaKnown RBP11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 IFT81Q8WYA0 676 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 CCDC114Q96M63 670 aa11.22□□□□□ -0.61
SMARCA1-205ENST00000617310 RMDN3Q96TC7 470 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms