RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 KRT23Q9C075 422 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 MAF1Q9H063 256 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 STARD7Q9NQZ5 370 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 CYP39A1Q9NYL5 469 aa11.36□□□□□ -0.59
TARDBP-218ENST00000617172 SZT2Q5T011 3432 aa11.35□□□□□ -0.59
TARDBP-218ENST00000617172 COL11A1P12107 1806 aaPredicted RBP11.35□□□□□ -0.59
TARDBP-218ENST00000617172 SOWAHBA6NEL2 793 aa11.35□□□□□ -0.59
TARDBP-218ENST00000617172 DCDC2CA8MYV0 355 aa11.35□□□□□ -0.59
TARDBP-218ENST00000617172 KDM4AO75164 1064 aa11.35□□□□□ -0.59
TARDBP-218ENST00000617172 C6orf222P0C671 652 aaPredicted RBP11.35□□□□□ -0.59
TARDBP-218ENST00000617172 SNAP25P60880 206 aa11.35□□□□□ -0.59
TARDBP-218ENST00000617172 TNFAIP2Q03169 654 aa11.35□□□□□ -0.59
TARDBP-218ENST00000617172 MUM1L1Q5H9M0 696 aa11.35□□□□□ -0.59
TARDBP-218ENST00000617172 GNASQ5JWF2 1037 aa11.35□□□□□ -0.59
TARDBP-218ENST00000617172 TTC22Q5TAA0 569 aa11.35□□□□□ -0.59
TARDBP-218ENST00000617172 NSMFQ6X4W1 530 aa11.35□□□□□ -0.59
TARDBP-218ENST00000617172 NOL8Q76FK4 1167 aaKnown RBP11.35□□□□□ -0.59
TARDBP-218ENST00000617172 LRCH3Q96II8 777 aa11.35□□□□□ -0.59
TARDBP-218ENST00000617172 ZSCAN10Q96SZ4 725 aaPredicted RBP11.35□□□□□ -0.59
TARDBP-218ENST00000617172 MPHOSPH6Q99547 160 aaKnown RBP11.35□□□□□ -0.59
TARDBP-218ENST00000617172 KATNBL1Q9H079 304 aa11.35□□□□□ -0.59
TARDBP-218ENST00000617172 UPF3AQ9H1J1 476 aaKnown RBP11.35□□□□□ -0.59
TARDBP-218ENST00000617172 KAT14Q9H8E8 782 aa11.35□□□□□ -0.59
TARDBP-218ENST00000617172 GPCPD1Q9NPB8 672 aa11.35□□□□□ -0.59
TARDBP-218ENST00000617172 PRDM5Q9NQX1 630 aaPredicted RBP11.35□□□□□ -0.59
TARDBP-218ENST00000617172 Q9Y3F1 56 aa11.35□□□□□ -0.59
TARDBP-218ENST00000617172 MYH4Q9Y623 1939 aa11.35□□□□□ -0.59
TARDBP-218ENST00000617172 MROH7Q68CQ1 1323 aa11.35□□□□□ -0.59
TARDBP-218ENST00000617172 FRMPD2Q68DX3 1309 aaPredicted RBP11.35□□□□□ -0.59
TARDBP-218ENST00000617172 WDR19Q8NEZ3 1342 aa11.35□□□□□ -0.59
TARDBP-218ENST00000617172 B4DLN1 442 aa11.34□□□□□ -0.59
TARDBP-218ENST00000617172 ZEB2O60315 1214 aa11.34□□□□□ -0.59
TARDBP-218ENST00000617172 CABYRO75952 493 aa11.34□□□□□ -0.59
TARDBP-218ENST00000617172 ASGR1P07306 291 aa11.34□□□□□ -0.59
TARDBP-218ENST00000617172 CLTBP09497 229 aa11.34□□□□□ -0.59
TARDBP-218ENST00000617172 MRPL12P52815 198 aaKnown RBP11.34□□□□□ -0.59
TARDBP-218ENST00000617172 BAATQ14032 418 aaPredicted RBP11.34□□□□□ -0.59
TARDBP-218ENST00000617172 RASGRP2Q7LDG7 609 aa11.34□□□□□ -0.59
TARDBP-218ENST00000617172 PNMA1Q8ND90 353 aa11.34□□□□□ -0.59
TARDBP-218ENST00000617172 RGS22Q8NE09 1264 aa11.34□□□□□ -0.59
TARDBP-218ENST00000617172 MORC4Q8TE76 937 aa11.34□□□□□ -0.59
TARDBP-218ENST00000617172 VTI1AQ96AJ9 217 aa11.34□□□□□ -0.59
TARDBP-218ENST00000617172 LENG1Q96BZ8 264 aaPredicted RBP11.34□□□□□ -0.59
TARDBP-218ENST00000617172 UBAC1Q9BSL1 405 aa11.34□□□□□ -0.59
TARDBP-218ENST00000617172 SEZ6LQ9BYH1 1024 aa11.34□□□□□ -0.59
TARDBP-218ENST00000617172 VTA1Q9NP79 307 aa11.34□□□□□ -0.59
TARDBP-218ENST00000617172 PDLIM7Q9NR12 457 aa11.34□□□□□ -0.59
TARDBP-218ENST00000617172 ZSWIM5Q9P217 1185 aa11.34□□□□□ -0.59
TARDBP-218ENST00000617172 ALPK3Q96L96 1907 aa11.34□□□□□ -0.59
TARDBP-218ENST00000617172 ZNFX1Q9P2E3 1918 aaKnown RBP11.34□□□□□ -0.59
TARDBP-218ENST00000617172 NEDD4P46934 1319 aa11.34□□□□□ -0.59
TARDBP-218ENST00000617172 RAD50Q92878 1312 aa11.34□□□□□ -0.59
TARDBP-218ENST00000617172 PTPDC1A2A3K4 754 aa11.33□□□□□ -0.6
TARDBP-218ENST00000617172 TRIM43BA6NCK2 446 aa11.33□□□□□ -0.6
TARDBP-218ENST00000617172 B4E1Z4 1266 aa11.33□□□□□ -0.6
TARDBP-218ENST00000617172 KIAA0355O15063 1070 aa11.33□□□□□ -0.6
TARDBP-218ENST00000617172 PQBP1O60828 265 aaKnown RBP11.33□□□□□ -0.6
TARDBP-218ENST00000617172 RAG1P15918 1043 aa11.33□□□□□ -0.6
TARDBP-218ENST00000617172 TRDNQ13061 729 aa11.33□□□□□ -0.6
TARDBP-218ENST00000617172 ASPRV1Q53RT3 343 aa11.33□□□□□ -0.6
TARDBP-218ENST00000617172 RNF207Q6ZRF8 634 aa11.33□□□□□ -0.6
TARDBP-218ENST00000617172 BADQ92934 168 aa11.33□□□□□ -0.6
TARDBP-218ENST00000617172 TRIM43Q96BQ3 446 aaPredicted RBP11.33□□□□□ -0.6
TARDBP-218ENST00000617172 ZKSCAN3Q9BRR0 538 aa11.33□□□□□ -0.6
TARDBP-218ENST00000617172 AP5M1Q9H0R1 490 aa11.33□□□□□ -0.6
TARDBP-218ENST00000617172 TMEM39AQ9NV64 488 aa11.33□□□□□ -0.6
TARDBP-218ENST00000617172 GNEQ9Y223 722 aaKnown RBP11.33□□□□□ -0.6
TARDBP-218ENST00000617172 A0A0U1RQG5 324 aaPredicted RBP11.32□□□□□ -0.6
TARDBP-218ENST00000617172 ARVCFO00192 962 aa11.32□□□□□ -0.6
TARDBP-218ENST00000617172 NFIBO00712 420 aa11.32□□□□□ -0.6
TARDBP-218ENST00000617172 ADCY6O43306 1168 aa11.32□□□□□ -0.6
TARDBP-218ENST00000617172 PDE4AP27815 886 aa11.32□□□□□ -0.6
TARDBP-218ENST00000617172 CDK7P50613 346 aa11.32□□□□□ -0.6
TARDBP-218ENST00000617172 FAAP100Q0VG06 881 aa11.32□□□□□ -0.6
TARDBP-218ENST00000617172 FSCN1Q16658 493 aaKnown RBP11.32□□□□□ -0.6
TARDBP-218ENST00000617172 FAM109BQ6ICB4 259 aaPredicted RBP11.32□□□□□ -0.6
TARDBP-218ENST00000617172 TAPT1Q6NXT6 567 aa11.32□□□□□ -0.6
TARDBP-218ENST00000617172 KIAA1211Q6ZU35 1233 aa11.32□□□□□ -0.6
TARDBP-218ENST00000617172 SH3RF1Q7Z6J0 888 aa11.32□□□□□ -0.6
TARDBP-218ENST00000617172 DEFB123Q8N688 67 aa11.32□□□□□ -0.6
TARDBP-218ENST00000617172 ENAHQ8N8S7 591 aaPredicted RBP11.32□□□□□ -0.6
TARDBP-218ENST00000617172 DNERQ8NFT8 737 aa11.32□□□□□ -0.6
TARDBP-218ENST00000617172 CLEC4DQ8WXI8 215 aa11.32□□□□□ -0.6
TARDBP-218ENST00000617172 U3KPZ7 1027 aaPredicted RBP11.32□□□□□ -0.6
TARDBP-218ENST00000617172 SMCHD1A6NHR9 2005 aa11.31□□□□□ -0.6
TARDBP-218ENST00000617172 FRMPD3Q5JV73 1810 aa11.31□□□□□ -0.6
TARDBP-218ENST00000617172 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.31□□□□□ -0.6
TARDBP-218ENST00000617172 MYADML2A6NDP7 307 aa11.31□□□□□ -0.6
TARDBP-218ENST00000617172 TLR3O15455 904 aaKnown RBP11.31□□□□□ -0.6
TARDBP-218ENST00000617172 DYNC1LI2O43237 492 aaPredicted RBP11.31□□□□□ -0.6
TARDBP-218ENST00000617172 PARP1P09874 1014 aaKnown RBP11.31□□□□□ -0.6
TARDBP-218ENST00000617172 GOLGA8HP0CJ92 632 aa11.31□□□□□ -0.6
TARDBP-218ENST00000617172 GSPT1P15170 499 aaKnown RBP11.31□□□□□ -0.6
TARDBP-218ENST00000617172 SMPD1P17405 629 aa11.31□□□□□ -0.6
TARDBP-218ENST00000617172 CHMLP26374 656 aa11.31□□□□□ -0.6
TARDBP-218ENST00000617172 CALML3P27482 149 aa11.31□□□□□ -0.6
TARDBP-218ENST00000617172 ALDH5A1P51649 535 aaPredicted RBP11.31□□□□□ -0.6
TARDBP-218ENST00000617172 RPS6P62753 249 aaKnown RBP11.31□□□□□ -0.6
TARDBP-218ENST00000617172 DUSP28Q4G0W2 176 aa11.31□□□□□ -0.6
TARDBP-218ENST00000617172 IFIT1BQ5T764 474 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms