RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 ZNF227Q86WZ6 799 aa7.94□□□□□ -1.14
SCAMP1-205ENST00000614488 PPP1R14AQ96A00 147 aa7.94□□□□□ -1.14
SCAMP1-205ENST00000614488 TRIM55Q9BYV6 548 aa7.94□□□□□ -1.14
SCAMP1-205ENST00000614488 NSUN3Q9H649 340 aaKnown RBP7.94□□□□□ -1.14
SCAMP1-205ENST00000614488 TRBV23OR9-2A0A075B6M9 112 aa7.93□□□□□ -1.14
SCAMP1-205ENST00000614488 CORO7P57737 925 aa7.93□□□□□ -1.14
SCAMP1-205ENST00000614488 MESP2Q0VG99 397 aa7.93□□□□□ -1.14
SCAMP1-205ENST00000614488 SLC10A6Q3KNW5 377 aa7.93□□□□□ -1.14
SCAMP1-205ENST00000614488 GTF2IRD2BQ6EKJ0 949 aa7.93□□□□□ -1.14
SCAMP1-205ENST00000614488 GTF2IRD2Q86UP8 949 aa7.93□□□□□ -1.14
SCAMP1-205ENST00000614488 JAMLQ86YT9 394 aa7.93□□□□□ -1.14
SCAMP1-205ENST00000614488 FBXO15Q8NCQ5 510 aaPredicted RBP7.93□□□□□ -1.14
SCAMP1-205ENST00000614488 FAM84AQ96KN4 292 aa7.93□□□□□ -1.14
SCAMP1-205ENST00000614488 HIRIP3Q9BW71 556 aaPredicted RBP7.93□□□□□ -1.14
SCAMP1-205ENST00000614488 ST7Q9NRC1 585 aa7.93□□□□□ -1.14
SCAMP1-205ENST00000614488 IMPACTQ9P2X3 320 aa7.93□□□□□ -1.14
SCAMP1-205ENST00000614488 ITGAVP06756 1048 aa7.92□□□□□ -1.14
SCAMP1-205ENST00000614488 NPM2Q86SE8 214 aaKnown RBP7.92□□□□□ -1.14
SCAMP1-205ENST00000614488 NUP43Q8NFH3 380 aa7.92□□□□□ -1.14
SCAMP1-205ENST00000614488 BHLHE22Q8NFJ8 381 aaPredicted RBP7.92□□□□□ -1.14
SCAMP1-205ENST00000614488 COPS5Q92905 334 aa7.92□□□□□ -1.14
SCAMP1-205ENST00000614488 DIRC2Q96SL1 478 aa7.92□□□□□ -1.14
SCAMP1-205ENST00000614488 NKX2-4Q9H2Z4 354 aa7.92□□□□□ -1.14
SCAMP1-205ENST00000614488 DCP1AQ9NPI6 582 aaPredicted RBP7.92□□□□□ -1.14
SCAMP1-205ENST00000614488 CYP26B1Q9NR63 512 aa7.92□□□□□ -1.14
SCAMP1-205ENST00000614488 LRP2BPQ9P2M1 347 aa7.92□□□□□ -1.14
SCAMP1-205ENST00000614488 OR14I1A6ND48 311 aa7.91□□□□□ -1.14
SCAMP1-205ENST00000614488 HRKO00198 91 aa7.91□□□□□ -1.14
SCAMP1-205ENST00000614488 AGRPO00253 132 aa7.91□□□□□ -1.14
SCAMP1-205ENST00000614488 PRKCAP17252 672 aa7.91□□□□□ -1.14
SCAMP1-205ENST00000614488 PAMP19021 973 aa7.91□□□□□ -1.14
SCAMP1-205ENST00000614488 L1CAMP32004 1257 aa7.91□□□□□ -1.14
SCAMP1-205ENST00000614488 PDE6BP35913 854 aa7.91□□□□□ -1.14
SCAMP1-205ENST00000614488 ARL4AP40617 200 aa7.91□□□□□ -1.14
SCAMP1-205ENST00000614488 GALK1P51570 392 aa7.91□□□□□ -1.14
SCAMP1-205ENST00000614488 ERVFRD-1P60508 538 aa7.91□□□□□ -1.14
SCAMP1-205ENST00000614488 SCRN1Q12765 414 aa7.91□□□□□ -1.14
SCAMP1-205ENST00000614488 ST13P5Q8NFI4 369 aaPredicted RBP7.91□□□□□ -1.14
SCAMP1-205ENST00000614488 MSRB2Q9Y3D2 182 aa7.91□□□□□ -1.14
SCAMP1-205ENST00000614488 U2SURPO15042 1029 aaKnown RBP7.9□□□□□ -1.14
SCAMP1-205ENST00000614488 GTF2F1P35269 517 aaKnown RBP eCLIP7.9□□□□□ -1.14
SCAMP1-205ENST00000614488 CYP4F8P98187 520 aa7.9□□□□□ -1.14
SCAMP1-205ENST00000614488 ADGRF1Q5T601 910 aa7.9□□□□□ -1.14
SCAMP1-205ENST00000614488 SIRT2Q8IXJ6 389 aa7.9□□□□□ -1.14
SCAMP1-205ENST00000614488 NLGN2Q8NFZ4 835 aa7.9□□□□□ -1.14
SCAMP1-205ENST00000614488 BTN2A2Q8WVV5 523 aa7.9□□□□□ -1.14
SCAMP1-205ENST00000614488 SLC26A8Q96RN1 970 aa7.9□□□□□ -1.14
SCAMP1-205ENST00000614488 SLC38A3Q99624 504 aa7.9□□□□□ -1.14
SCAMP1-205ENST00000614488 LGR4Q9BXB1 951 aa7.9□□□□□ -1.14
SCAMP1-205ENST00000614488 TNFRSF12AQ9NP84 129 aa7.9□□□□□ -1.14
SCAMP1-205ENST00000614488 A0A1W2PQ27 194 aa7.89□□□□□ -1.15
SCAMP1-205ENST00000614488 A0A1W2PQ64 194 aa7.89□□□□□ -1.15
SCAMP1-205ENST00000614488 A0A1W2PQC6 194 aa7.89□□□□□ -1.15
SCAMP1-205ENST00000614488 A0A1W2PQD8 194 aa7.89□□□□□ -1.15
SCAMP1-205ENST00000614488 PEX10O60683 326 aa7.89□□□□□ -1.15
SCAMP1-205ENST00000614488 SCG5P05408 212 aa7.89□□□□□ -1.15
SCAMP1-205ENST00000614488 HOXC12P31275 282 aa7.89□□□□□ -1.15
SCAMP1-205ENST00000614488 MVKQ03426 396 aa7.89□□□□□ -1.15
SCAMP1-205ENST00000614488 RBL2Q08999 1139 aa7.89□□□□□ -1.15
SCAMP1-205ENST00000614488 KIR3DS1Q14943 382 aa7.89□□□□□ -1.15
SCAMP1-205ENST00000614488 ZNF648Q5T619 568 aaPredicted RBP7.89□□□□□ -1.15
SCAMP1-205ENST00000614488 ZNF669Q96BR6 464 aaPredicted RBP7.89□□□□□ -1.15
SCAMP1-205ENST00000614488 SGSM3Q96HU1 749 aa7.89□□□□□ -1.15
SCAMP1-205ENST00000614488 CCDC140Q96MF4 163 aa7.89□□□□□ -1.15
SCAMP1-205ENST00000614488 PPP1R16BQ96T49 567 aa7.89□□□□□ -1.15
SCAMP1-205ENST00000614488 ZNF552Q9H707 407 aaPredicted RBP7.89□□□□□ -1.15
SCAMP1-205ENST00000614488 PPP1R1BQ9UD71 204 aaPredicted RBP7.89□□□□□ -1.15
SCAMP1-205ENST00000614488 NPHP3-ACAD11A0A0J9YXS1 232 aa7.88□□□□□ -1.15
SCAMP1-205ENST00000614488 IQCA1LA6NCM1 817 aa7.88□□□□□ -1.15
SCAMP1-205ENST00000614488 TBX1O43435 398 aa7.88□□□□□ -1.15
SCAMP1-205ENST00000614488 THBDP07204 575 aa7.88□□□□□ -1.15
SCAMP1-205ENST00000614488 SREK1Q8WXA9 508 aaKnown RBP7.88□□□□□ -1.15
SCAMP1-205ENST00000614488 MMP19Q99542 508 aa7.88□□□□□ -1.15
SCAMP1-205ENST00000614488 GOLGA2P5Q9HBQ8 144 aa7.88□□□□□ -1.15
SCAMP1-205ENST00000614488 PDLIM7Q9NR12 457 aa7.88□□□□□ -1.15
SCAMP1-205ENST00000614488 SIRPGQ9P1W8 387 aa7.88□□□□□ -1.15
SCAMP1-205ENST00000614488 CPP00450 1065 aa7.87□□□□□ -1.15
SCAMP1-205ENST00000614488 CAPNS1P04632 268 aa7.87□□□□□ -1.15
SCAMP1-205ENST00000614488 MPOP05164 745 aa7.87□□□□□ -1.15
SCAMP1-205ENST00000614488 C8AP07357 584 aa7.87□□□□□ -1.15
SCAMP1-205ENST00000614488 MSL3P1P0C860 447 aa7.87□□□□□ -1.15
SCAMP1-205ENST00000614488 YBX1P67809 324 aaKnown RBP7.87□□□□□ -1.15
SCAMP1-205ENST00000614488 CYP4F3Q08477 520 aa7.87□□□□□ -1.15
SCAMP1-205ENST00000614488 TMEM62Q0P6H9 643 aa7.87□□□□□ -1.15
SCAMP1-205ENST00000614488 OLFML2BQ68BL8 750 aa7.87□□□□□ -1.15
SCAMP1-205ENST00000614488 ZNF605Q86T29 641 aa7.87□□□□□ -1.15
SCAMP1-205ENST00000614488 NPLOC4Q8TAT6 608 aa7.87□□□□□ -1.15
SCAMP1-205ENST00000614488 KRTAP9-9Q9BYP9 154 aa7.87□□□□□ -1.15
SCAMP1-205ENST00000614488 KRTAP9-4Q9BYQ2 154 aa7.87□□□□□ -1.15
SCAMP1-205ENST00000614488 CLEC1BQ9P126 229 aa7.87□□□□□ -1.15
SCAMP1-205ENST00000614488 A0A1W2PQU0 124 aa7.86□□□□□ -1.15
SCAMP1-205ENST00000614488 ABLIM1O14639 778 aa7.86□□□□□ -1.15
SCAMP1-205ENST00000614488 SRGAP3O43295 1099 aa7.86□□□□□ -1.15
SCAMP1-205ENST00000614488 SEMA7AO75326 666 aa7.86□□□□□ -1.15
SCAMP1-205ENST00000614488 SNRPB2P08579 225 aaKnown RBP7.86□□□□□ -1.15
SCAMP1-205ENST00000614488 PLS3P13797 630 aa7.86□□□□□ -1.15
SCAMP1-205ENST00000614488 PPP2R2AP63151 447 aa7.86□□□□□ -1.15
SCAMP1-205ENST00000614488 SERINC3Q13530 473 aa7.86□□□□□ -1.15
SCAMP1-205ENST00000614488 RASGRF1Q13972 1273 aa7.86□□□□□ -1.15
SCAMP1-205ENST00000614488 SOGA3Q5TF21 947 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms