RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-240ENST00000602263 CABYRO75952 493 aa12.35□□□□□ -0.43
FARP1-240ENST00000602263 FOSL2P15408 326 aa12.35□□□□□ -0.43
FARP1-240ENST00000602263 CDK7P50613 346 aa12.35□□□□□ -0.43
FARP1-240ENST00000602263 MCMDC2Q4G0Z9 681 aa12.35□□□□□ -0.43
FARP1-240ENST00000602263 RRP12Q5JTH9 1297 aaKnown RBP12.35□□□□□ -0.43
FARP1-240ENST00000602263 VPS53Q5VIR6 699 aa12.35□□□□□ -0.43
FARP1-240ENST00000602263 MFSD5Q6N075 450 aa12.35□□□□□ -0.43
FARP1-240ENST00000602263 NSMFQ6X4W1 530 aa12.35□□□□□ -0.43
FARP1-240ENST00000602263 TLK2Q86UE8 772 aa12.35□□□□□ -0.43
FARP1-240ENST00000602263 TMEM199Q8N511 208 aa12.35□□□□□ -0.43
FARP1-240ENST00000602263 MAFAQ8NHW3 353 aaPredicted RBP12.35□□□□□ -0.43
FARP1-240ENST00000602263 MYLIPQ8WY64 445 aa12.35□□□□□ -0.43
FARP1-240ENST00000602263 TTYH1Q9H313 450 aaPredicted RBP12.35□□□□□ -0.43
FARP1-240ENST00000602263 IL17RBQ9NRM6 502 aa12.35□□□□□ -0.43
FARP1-240ENST00000602263 CYP39A1Q9NYL5 469 aa12.35□□□□□ -0.43
FARP1-240ENST00000602263 VCANP13611 3396 aa12.35□□□□□ -0.43
FARP1-240ENST00000602263 ICAM1P05362 532 aa12.34□□□□□ -0.43
FARP1-240ENST00000602263 TOP1P11387 765 aaKnown RBP12.34□□□□□ -0.43
FARP1-240ENST00000602263 DNAJB2P25686 324 aa12.34□□□□□ -0.43
FARP1-240ENST00000602263 PDE1AP54750 535 aa12.34□□□□□ -0.43
FARP1-240ENST00000602263 SNAP25P60880 206 aa12.34□□□□□ -0.43
FARP1-240ENST00000602263 NKX3-2P78367 333 aa12.34□□□□□ -0.43
FARP1-240ENST00000602263 IRX5P78411 483 aaPredicted RBP12.34□□□□□ -0.43
FARP1-240ENST00000602263 BEX3Q00994 111 aa12.34□□□□□ -0.43
FARP1-240ENST00000602263 HDAC1Q13547 482 aaPredicted RBP12.34□□□□□ -0.43
FARP1-240ENST00000602263 ALX1Q15699 326 aa12.34□□□□□ -0.43
FARP1-240ENST00000602263 FSCN1Q16658 493 aaKnown RBP12.34□□□□□ -0.43
FARP1-240ENST00000602263 TICAM2Q86XR7 235 aa12.34□□□□□ -0.43
FARP1-240ENST00000602263 CRBNQ96SW2 442 aa12.34□□□□□ -0.43
FARP1-240ENST00000602263 PPP1R12CQ9BZL4 782 aa12.34□□□□□ -0.43
FARP1-240ENST00000602263 INCENPQ9NQS7 918 aa12.34□□□□□ -0.43
FARP1-240ENST00000602263 ADD3Q9UEY8 706 aaKnown RBP12.34□□□□□ -0.43
FARP1-240ENST00000602263 PNMA2Q9UL42 364 aa12.34□□□□□ -0.43
FARP1-240ENST00000602263 TTC28Q96AY4 2481 aa12.34□□□□□ -0.43
FARP1-240ENST00000602263 LAMA4Q16363 1823 aa12.34□□□□□ -0.43
FARP1-240ENST00000602263 GBF1Q92538 1859 aa12.34□□□□□ -0.43
FARP1-240ENST00000602263 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.33□□□□□ -0.44
FARP1-240ENST00000602263 TRIM6-TRIM34B2RNG4 842 aa12.33□□□□□ -0.44
FARP1-240ENST00000602263 NOVP48745 357 aa12.33□□□□□ -0.44
FARP1-240ENST00000602263 MUM1L1Q5H9M0 696 aa12.33□□□□□ -0.44
FARP1-240ENST00000602263 SYDE2Q5VT97 1194 aa12.33□□□□□ -0.44
FARP1-240ENST00000602263 PSRC1Q6PGN9 363 aaPredicted RBP12.33□□□□□ -0.44
FARP1-240ENST00000602263 CXCL17Q6UXB2 119 aa12.33□□□□□ -0.44
FARP1-240ENST00000602263 EEPD1Q7L9B9 569 aa12.33□□□□□ -0.44
FARP1-240ENST00000602263 RASGRP2Q7LDG7 609 aa12.33□□□□□ -0.44
FARP1-240ENST00000602263 FBXO16Q8IX29 292 aaPredicted RBP12.33□□□□□ -0.44
FARP1-240ENST00000602263 FAM126BQ8IXS8 530 aa12.33□□□□□ -0.44
FARP1-240ENST00000602263 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.33□□□□□ -0.443e-7■■□□□ 11.4
FARP1-240ENST00000602263 SEZ6LQ9BYH1 1024 aa12.33□□□□□ -0.44
FARP1-240ENST00000602263 RANBP17Q9H2T7 1088 aaKnown RBP12.33□□□□□ -0.44
FARP1-240ENST00000602263 VTA1Q9NP79 307 aa12.33□□□□□ -0.44
FARP1-240ENST00000602263 GNEQ9Y223 722 aaKnown RBP12.33□□□□□ -0.44
FARP1-240ENST00000602263 ZMYM6O95789 1325 aa12.33□□□□□ -0.44
FARP1-240ENST00000602263 A0A0D9SFI3 127 aa12.32□□□□□ -0.44
FARP1-240ENST00000602263 CTAGE5O15320 804 aa12.32□□□□□ -0.44
FARP1-240ENST00000602263 DYNC1LI2O43237 492 aaPredicted RBP12.32□□□□□ -0.44
FARP1-240ENST00000602263 FGAP02671 866 aa12.32□□□□□ -0.44
FARP1-240ENST00000602263 FGRP09769 529 aa12.32□□□□□ -0.44
FARP1-240ENST00000602263 PCP11498 1178 aaKnown RBP12.32□□□□□ -0.44
FARP1-240ENST00000602263 SMPD1P17405 629 aa12.32□□□□□ -0.44
FARP1-240ENST00000602263 SLC16A2P36021 539 aa12.32□□□□□ -0.44
FARP1-240ENST00000602263 IQSEC1Q6DN90 963 aa12.32□□□□□ -0.44
FARP1-240ENST00000602263 FAM227BQ96M60 508 aa12.32□□□□□ -0.44
FARP1-240ENST00000602263 MPHOSPH6Q99547 160 aaKnown RBP12.32□□□□□ -0.44
FARP1-240ENST00000602263 TMEM47Q9BQJ4 181 aa12.32□□□□□ -0.44
FARP1-240ENST00000602263 COL25A1Q9BXS0 654 aaPredicted RBP12.32□□□□□ -0.44
FARP1-240ENST00000602263 MTIF3Q9H2K0 278 aaKnown RBP12.32□□□□□ -0.44
FARP1-240ENST00000602263 TCP11L1Q9NUJ3 509 aa12.32□□□□□ -0.44
FARP1-240ENST00000602263 Q9Y3F1 56 aa12.32□□□□□ -0.44
FARP1-240ENST00000602263 ASTN1O14525 1302 aa12.32□□□□□ -0.44
FARP1-240ENST00000602263 FRMPD2Q68DX3 1309 aaPredicted RBP12.32□□□□□ -0.44
FARP1-240ENST00000602263 CCDC171Q6TFL3 1326 aa12.32□□□□□ -0.44
FARP1-240ENST00000602263 LOC102724159A0A0B4J2E5 919 aa12.31□□□□□ -0.44
FARP1-240ENST00000602263 PTPDC1A2A3K4 754 aa12.31□□□□□ -0.44
FARP1-240ENST00000602263 HSPD1P10809 573 aaKnown RBP12.31□□□□□ -0.44
FARP1-240ENST00000602263 CSF2RAP15509 400 aa12.31□□□□□ -0.44
FARP1-240ENST00000602263 MFAP1P55081 439 aaKnown RBP12.31□□□□□ -0.44
FARP1-240ENST00000602263 HAND2P61296 217 aa12.31□□□□□ -0.44
FARP1-240ENST00000602263 ITGA7Q13683 1181 aa12.31□□□□□ -0.44
FARP1-240ENST00000602263 PWP2Q15269 919 aaKnown RBP12.31□□□□□ -0.44
FARP1-240ENST00000602263 TMEM240Q5SV17 173 aa12.31□□□□□ -0.44
FARP1-240ENST00000602263 TTBK2Q6IQ55 1244 aa12.31□□□□□ -0.44
FARP1-240ENST00000602263 BTNL9Q6UXG8 535 aa12.31□□□□□ -0.44
FARP1-240ENST00000602263 KIAA1211Q6ZU35 1233 aa12.31□□□□□ -0.44
FARP1-240ENST00000602263 TIFAQ96CG3 184 aa12.31□□□□□ -0.44
FARP1-240ENST00000602263 HIPK3Q9H422 1215 aa12.31□□□□□ -0.44
FARP1-240ENST00000602263 RNF41Q9H4P4 317 aaPredicted RBP12.31□□□□□ -0.44
FARP1-240ENST00000602263 GPCPD1Q9NPB8 672 aa12.31□□□□□ -0.44
FARP1-240ENST00000602263 PDGFCQ9NRA1 345 aa12.31□□□□□ -0.44
FARP1-240ENST00000602263 NCOR1O75376 2440 aa12.31□□□□□ -0.44
FARP1-240ENST00000602263 CD4P01730 458 aa12.3□□□□□ -0.44
FARP1-240ENST00000602263 CALML3P27482 149 aa12.3□□□□□ -0.44
FARP1-240ENST00000602263 ALDH5A1P51649 535 aaPredicted RBP12.3□□□□□ -0.44
FARP1-240ENST00000602263 NMIQ13287 307 aaPredicted RBP12.3□□□□□ -0.44
FARP1-240ENST00000602263 AAMPQ13685 434 aa12.3□□□□□ -0.44
FARP1-240ENST00000602263 BAATQ14032 418 aaPredicted RBP12.3□□□□□ -0.44
FARP1-240ENST00000602263 AKNAD1Q5T1N1 836 aa12.3□□□□□ -0.44
FARP1-240ENST00000602263 TAPT1Q6NXT6 567 aa12.3□□□□□ -0.44
FARP1-240ENST00000602263 MFSD6Q6ZSS7 791 aa12.3□□□□□ -0.44
FARP1-240ENST00000602263 SLC43A3Q8NBI5 491 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms