RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 MTMR8Q96EF0 704 aa21.89■■□□□ 1.09
CCDC9-205ENST00000600117 LZTS2Q9BRK4 669 aa21.89■■□□□ 1.09
CCDC9-205ENST00000600117 SPZ1Q9BXG8 430 aa21.89■■□□□ 1.09
CCDC9-205ENST00000600117 RANBP17Q9H2T7 1088 aaKnown RBP21.89■■□□□ 1.09
CCDC9-205ENST00000600117 JMJD4Q9H9V9 463 aa21.89■■□□□ 1.09
CCDC9-205ENST00000600117 ST18O60284 1047 aa21.88■■□□□ 1.09
CCDC9-205ENST00000600117 PFKFB2O60825 505 aa21.88■■□□□ 1.09
CCDC9-205ENST00000600117 FDX1P10109 184 aa21.88■■□□□ 1.09
CCDC9-205ENST00000600117 SMARCA1P28370 1054 aa21.88■■□□□ 1.09
CCDC9-205ENST00000600117 ADD1P35611 737 aaKnown RBP21.88■■□□□ 1.09
CCDC9-205ENST00000600117 SNAP25P60880 206 aa21.88■■□□□ 1.09
CCDC9-205ENST00000600117 CCT2P78371 535 aaKnown RBP21.88■■□□□ 1.09
CCDC9-205ENST00000600117 TMEM132BQ14DG7 1078 aa21.88■■□□□ 1.09
CCDC9-205ENST00000600117 PPP2R5BQ15173 497 aa21.88■■□□□ 1.09
CCDC9-205ENST00000600117 FAM110CQ1W6H9 321 aa21.88■■□□□ 1.09
CCDC9-205ENST00000600117 CMTR1Q8N1G2 835 aaKnown RBP21.88■■□□□ 1.09
CCDC9-205ENST00000600117 ANKRD13CQ8N6S4 541 aa21.88■■□□□ 1.09
CCDC9-205ENST00000600117 ANKLE1Q8NAG6 615 aa21.88■■□□□ 1.09
CCDC9-205ENST00000600117 PAGR1Q9BTK6 254 aa21.88■■□□□ 1.09
CCDC9-205ENST00000600117 NCOA5Q9HCD5 579 aaKnown RBP21.88■■□□□ 1.09
CCDC9-205ENST00000600117 ZNF214Q9UL59 606 aaPredicted RBP21.88■■□□□ 1.09
CCDC9-205ENST00000600117 LIMCH1Q9UPQ0 1083 aa21.88■■□□□ 1.09
CCDC9-205ENST00000600117 ZNF536O15090 1300 aa21.87■■□□□ 1.09
CCDC9-205ENST00000600117 BAZ2BQ9UIF8 2168 aaKnown RBP21.87■■□□□ 1.09
CCDC9-205ENST00000600117 ZBED4O75132 1171 aa21.87■■□□□ 1.09
CCDC9-205ENST00000600117 STK3Q13188 491 aa21.87■■□□□ 1.09
CCDC9-205ENST00000600117 Q3C1V9 767 aa21.87■■□□□ 1.09
CCDC9-205ENST00000600117 Q7L0L9 218 aa21.87■■□□□ 1.09
CCDC9-205ENST00000600117 C7orf61Q8IZ16 206 aa21.87■■□□□ 1.09
CCDC9-205ENST00000600117 DIS3LQ8TF46 1054 aaKnown RBP21.87■■□□□ 1.09
CCDC9-205ENST00000600117 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.87■■□□□ 1.09
CCDC9-205ENST00000600117 CNTNAP5Q8WYK1 1306 aa21.86■■□□□ 1.09
CCDC9-205ENST00000600117 CCDC196A0A1B0GTZ2 297 aa21.86■■□□□ 1.09
CCDC9-205ENST00000600117 ATP2A1O14983 1001 aa21.86■■□□□ 1.09
CCDC9-205ENST00000600117 ERVK-9P63128 1117 aa21.86■■□□□ 1.09
CCDC9-205ENST00000600117 ERVK-24P63145 666 aa21.86■■□□□ 1.09
CCDC9-205ENST00000600117 ST3GAL1Q11201 340 aa21.86■■□□□ 1.09
CCDC9-205ENST00000600117 SCRN1Q12765 414 aa21.86■■□□□ 1.09
CCDC9-205ENST00000600117 NTRK3Q16288 839 aa21.86■■□□□ 1.09
CCDC9-205ENST00000600117 COA7Q96BR5 231 aa21.86■■□□□ 1.09
CCDC9-205ENST00000600117 SLKQ9H2G2 1235 aaPredicted RBP21.86■■□□□ 1.09
CCDC9-205ENST00000600117 VAT1LQ9HCJ6 419 aa21.86■■□□□ 1.09
CCDC9-205ENST00000600117 OAZ1P54368 228 aa21.85■■□□□ 1.09
CCDC9-205ENST00000600117 CDC37Q16543 378 aaPredicted RBP21.85■■□□□ 1.09
CCDC9-205ENST00000600117 GPRC5AQ8NFJ5 357 aa21.85■■□□□ 1.09
CCDC9-205ENST00000600117 SPATC1LQ9H0A9 340 aa21.85■■□□□ 1.09
CCDC9-205ENST00000600117 RAVER2Q9HCJ3 691 aaKnown RBP21.85■■□□□ 1.09
CCDC9-205ENST00000600117 MTMR10Q9NXD2 777 aa21.85■■□□□ 1.09
CCDC9-205ENST00000600117 ZMYND8Q9ULU4 1186 aaPredicted RBP21.85■■□□□ 1.09
CCDC9-205ENST00000600117 DHX16O60231 1041 aaKnown RBP21.84■■□□□ 1.09
CCDC9-205ENST00000600117 QRICH1Q2TAL8 776 aa21.84■■□□□ 1.09
CCDC9-205ENST00000600117 CCDC174Q6PII3 467 aa21.84■■□□□ 1.09
CCDC9-205ENST00000600117 NECAB1Q8N987 351 aa21.84■■□□□ 1.09
CCDC9-205ENST00000600117 GTF3C6Q969F1 213 aa21.84■■□□□ 1.09
CCDC9-205ENST00000600117 PIGSQ96S52 555 aa21.84■■□□□ 1.09
CCDC9-205ENST00000600117 MOV10L1Q9BXT6 1211 aaKnown RBP21.84■■□□□ 1.09
CCDC9-205ENST00000600117 IFNAR1P17181 557 aa21.83■■□□□ 1.09
CCDC9-205ENST00000600117 MCM2P49736 904 aa21.83■■□□□ 1.09
CCDC9-205ENST00000600117 RIOX2Q8IUF8 465 aa21.83■■□□□ 1.09
CCDC9-205ENST00000600117 TDHQ8IZJ6 230 aa21.83■■□□□ 1.09
CCDC9-205ENST00000600117 CPXCR1Q8N123 301 aa21.83■■□□□ 1.09
CCDC9-205ENST00000600117 CCDC82Q8N4S0 544 aa21.83■■□□□ 1.09
CCDC9-205ENST00000600117 ZSCAN31Q96LW9 406 aaPredicted RBP21.83■■□□□ 1.09
CCDC9-205ENST00000600117 AGBL1Q96MI9 1066 aa21.83■■□□□ 1.09
CCDC9-205ENST00000600117 TEX13BQ9BXU2 312 aa21.83■■□□□ 1.09
CCDC9-205ENST00000600117 CTDP1Q9Y5B0 961 aaPredicted RBP21.83■■□□□ 1.09
CCDC9-205ENST00000600117 EYSQ5T1H1 3165 aa21.83■■□□□ 1.08
CCDC9-205ENST00000600117 SMCHD1A6NHR9 2005 aa21.82■■□□□ 1.08
CCDC9-205ENST00000600117 ZBTB5O15062 677 aa21.82■■□□□ 1.08
CCDC9-205ENST00000600117 PPP1R11O60927 126 aaPredicted RBP21.82■■□□□ 1.08
CCDC9-205ENST00000600117 ICAM1P05362 532 aa21.82■■□□□ 1.08
CCDC9-205ENST00000600117 TAL1P17542 331 aaPredicted RBP21.82■■□□□ 1.08
CCDC9-205ENST00000600117 STAT3P40763 770 aa21.82■■□□□ 1.08
CCDC9-205ENST00000600117 MAGEA10P43363 369 aaPredicted RBP21.82■■□□□ 1.08
CCDC9-205ENST00000600117 PLS1Q14651 629 aa21.82■■□□□ 1.08
CCDC9-205ENST00000600117 PORCNQ9H237 461 aa21.82■■□□□ 1.08
CCDC9-205ENST00000600117 SH2B1Q9NRF2 756 aaPredicted RBP21.82■■□□□ 1.08
CCDC9-205ENST00000600117 RIPK3Q9Y572 518 aa21.82■■□□□ 1.08
CCDC9-205ENST00000600117 SPTBN5Q9NRC6 3674 aaKnown RBP21.82■■□□□ 1.08
CCDC9-205ENST00000600117 MYH6P13533 1939 aa21.82■■□□□ 1.08
CCDC9-205ENST00000600117 PRUNE2Q8WUY3 3088 aa21.81■■□□□ 1.08
CCDC9-205ENST00000600117 CTDNEP1O95476 244 aa21.81■■□□□ 1.08
CCDC9-205ENST00000600117 HMGCRP04035 888 aa21.81■■□□□ 1.08
CCDC9-205ENST00000600117 SNRNP48Q6IEG0 339 aaKnown RBP21.81■■□□□ 1.08
CCDC9-205ENST00000600117 HOMER1Q86YM7 354 aa21.81■■□□□ 1.08
CCDC9-205ENST00000600117 SHCBP1Q8NEM2 672 aa21.81■■□□□ 1.08
CCDC9-205ENST00000600117 PIBF1Q8WXW3 757 aa21.81■■□□□ 1.08
CCDC9-205ENST00000600117 RRP36Q96EU6 259 aaKnown RBP21.81■■□□□ 1.08
CCDC9-205ENST00000600117 PNMA6FA0A0J9YX94 578 aa21.8■■□□□ 1.08
CCDC9-205ENST00000600117 hCG_1642624A0A1W2PR95 340 aa21.8■■□□□ 1.08
CCDC9-205ENST00000600117 CCNA1P78396 465 aa21.8■■□□□ 1.08
CCDC9-205ENST00000600117 PHKBQ93100 1093 aa21.8■■□□□ 1.08
CCDC9-205ENST00000600117 SNX21Q969T3 373 aa21.8■■□□□ 1.08
CCDC9-205ENST00000600117 TMX3Q96JJ7 454 aa21.8■■□□□ 1.08
CCDC9-205ENST00000600117 COL25A1Q9BXS0 654 aaPredicted RBP21.8■■□□□ 1.08
CCDC9-205ENST00000600117 CCPG1Q9ULG6 757 aa21.8■■□□□ 1.08
CCDC9-205ENST00000600117 RPTORQ8N122 1335 aa21.8■■□□□ 1.08
CCDC9-205ENST00000600117 CPLX1O14810 134 aa21.79■■□□□ 1.08
CCDC9-205ENST00000600117 SLC25A27O95847 323 aa21.79■■□□□ 1.08
CCDC9-205ENST00000600117 SYN1P17600 705 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms