RNA–Protein interactions for RNA: ENST00000598923.1

SNRPA-205, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-205ENST00000598923 SNHG28P0DPA3 235 aa21.73■■□□□ 1.07
SNRPA-205ENST00000598923 AKR1A1P14550 325 aa21.73■■□□□ 1.07
SNRPA-205ENST00000598923 CREB3L3Q68CJ9 461 aa21.73■■□□□ 1.07
SNRPA-205ENST00000598923 ZNF467Q7Z7K2 595 aaPredicted RBP21.73■■□□□ 1.07
SNRPA-205ENST00000598923 TRERF1Q96PN7 1200 aa21.73■■□□□ 1.07
SNRPA-205ENST00000598923 CPVLQ9H3G5 476 aa21.73■■□□□ 1.07
SNRPA-205ENST00000598923 RNF146Q9NTX7 359 aa21.73■■□□□ 1.07
SNRPA-205ENST00000598923 FBXO40Q9UH90 709 aa21.73■■□□□ 1.07
SNRPA-205ENST00000598923 CCPG1Q9ULG6 757 aa21.73■■□□□ 1.07
SNRPA-205ENST00000598923 PHF24Q9UPV7 400 aa21.73■■□□□ 1.07
SNRPA-205ENST00000598923 ATP11BQ9Y2G3 1177 aa21.73■■□□□ 1.07
SNRPA-205ENST00000598923 SYNGAP1Q96PV0 1343 aa21.73■■□□□ 1.07
SNRPA-205ENST00000598923 MYCNP04198 464 aaPredicted RBP21.72■■□□□ 1.07
SNRPA-205ENST00000598923 SEC23AQ15436 765 aa21.72■■□□□ 1.07
SNRPA-205ENST00000598923 GPATCH4Q5T3I0 446 aaKnown RBP21.72■■□□□ 1.07
SNRPA-205ENST00000598923 FGD4Q96M96 766 aa21.72■■□□□ 1.07
SNRPA-205ENST00000598923 LBHD1Q9BQE6 289 aaPredicted RBP21.72■■□□□ 1.07
SNRPA-205ENST00000598923 RANBP17Q9H2T7 1088 aaKnown RBP21.72■■□□□ 1.07
SNRPA-205ENST00000598923 ACAD9Q9H845 621 aa21.72■■□□□ 1.07
SNRPA-205ENST00000598923 CNPY2Q9Y2B0 182 aa21.72■■□□□ 1.07
SNRPA-205ENST00000598923 COL6A3P12111 3177 aa21.72■■□□□ 1.07
SNRPA-205ENST00000598923 PGK1P00558 417 aa21.71■■□□□ 1.07
SNRPA-205ENST00000598923 TRIM60Q495X7 471 aa21.71■■□□□ 1.07
SNRPA-205ENST00000598923 FERMT2Q96AC1 680 aa21.71■■□□□ 1.07
SNRPA-205ENST00000598923 PRKAG2Q9UGJ0 569 aa21.71■■□□□ 1.07
SNRPA-205ENST00000598923 ADAMTS4O75173 837 aa21.7■■□□□ 1.06
SNRPA-205ENST00000598923 ICAM1P05362 532 aa21.7■■□□□ 1.06
SNRPA-205ENST00000598923 PARP1P09874 1014 aaKnown RBP21.7■■□□□ 1.06
SNRPA-205ENST00000598923 WTAPQ15007 396 aa21.7■■□□□ 1.06
SNRPA-205ENST00000598923 SART3Q15020 963 aaKnown RBP21.7■■□□□ 1.06
SNRPA-205ENST00000598923 NECTIN1Q15223 517 aa21.7■■□□□ 1.06
SNRPA-205ENST00000598923 TKFCQ3LXA3 575 aa21.7■■□□□ 1.06
SNRPA-205ENST00000598923 TMEM67Q5HYA8 995 aa21.7■■□□□ 1.06
SNRPA-205ENST00000598923 RNF180Q86T96 592 aa21.7■■□□□ 1.06
SNRPA-205ENST00000598923 LENG1Q96BZ8 264 aaPredicted RBP21.7■■□□□ 1.06
SNRPA-205ENST00000598923 SENP2Q9HC62 589 aa21.7■■□□□ 1.06
SNRPA-205ENST00000598923 VAT1LQ9HCJ6 419 aa21.7■■□□□ 1.06
SNRPA-205ENST00000598923 LAMA2P24043 3122 aaKnown RBP21.7■■□□□ 1.06
SNRPA-205ENST00000598923 DHX16O60231 1041 aaKnown RBP21.69■■□□□ 1.06
SNRPA-205ENST00000598923 ASPRV1Q53RT3 343 aa21.69■■□□□ 1.06
SNRPA-205ENST00000598923 MUM1L1Q5H9M0 696 aa21.69■■□□□ 1.06
SNRPA-205ENST00000598923 MB21D2Q8IYB1 491 aaPredicted RBP21.69■■□□□ 1.06
SNRPA-205ENST00000598923 PDLIM7Q9NR12 457 aa21.69■■□□□ 1.06
SNRPA-205ENST00000598923 POTEB2H3BUK9 544 aa21.68■■□□□ 1.06
SNRPA-205ENST00000598923 ANTXR2P58335 489 aa21.68■■□□□ 1.06
SNRPA-205ENST00000598923 RNF20Q5VTR2 975 aa21.68■■□□□ 1.06
SNRPA-205ENST00000598923 TSEN34Q9BSV6 310 aaKnown RBP21.68■■□□□ 1.06
SNRPA-205ENST00000598923 FAM184BQ9ULE4 1060 aa21.68■■□□□ 1.06
SNRPA-205ENST00000598923 LCTP09848 1927 aa21.68■■□□□ 1.06
SNRPA-205ENST00000598923 SYNRGQ9UMZ2 1314 aa21.67■■□□□ 1.06
SNRPA-205ENST00000598923 A0A1W2PQ45 241 aaPredicted RBP21.67■■□□□ 1.06
SNRPA-205ENST00000598923 A0A1W2PQY0 241 aa21.67■■□□□ 1.06
SNRPA-205ENST00000598923 PRC1O43663 620 aa21.67■■□□□ 1.06
SNRPA-205ENST00000598923 CNTN2Q02246 1040 aa21.67■■□□□ 1.06
SNRPA-205ENST00000598923 NSMFQ6X4W1 530 aa21.67■■□□□ 1.06
SNRPA-205ENST00000598923 SH3RF1Q7Z6J0 888 aa21.67■■□□□ 1.06
SNRPA-205ENST00000598923 ADGRF4Q8IZF3 695 aa21.67■■□□□ 1.06
SNRPA-205ENST00000598923 STAG2Q8N3U4 1231 aa21.67■■□□□ 1.06
SNRPA-205ENST00000598923 DEFB123Q8N688 67 aa21.67■■□□□ 1.06
SNRPA-205ENST00000598923 KLHDC9Q8NEP7 349 aa21.67■■□□□ 1.06
SNRPA-205ENST00000598923 A1CFQ9NQ94 594 aaKnown RBP21.67■■□□□ 1.06
SNRPA-205ENST00000598923 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.67■■□□□ 1.06
SNRPA-205ENST00000598923 LRRC37A2A6NM11 1700 aa21.66■■□□□ 1.06
SNRPA-205ENST00000598923 TRIM43BA6NCK2 446 aa21.66■■□□□ 1.06
SNRPA-205ENST00000598923 MCM5P33992 734 aa21.66■■□□□ 1.06
SNRPA-205ENST00000598923 TLE2Q04725 743 aa21.66■■□□□ 1.06
SNRPA-205ENST00000598923 ACVR2BQ13705 512 aa21.66■■□□□ 1.06
SNRPA-205ENST00000598923 CCSAPQ6IQ19 270 aaPredicted RBP21.66■■□□□ 1.06
SNRPA-205ENST00000598923 Q7L0L9 218 aa21.66■■□□□ 1.06
SNRPA-205ENST00000598923 FAM133AQ8N9E0 248 aa21.66■■□□□ 1.06
SNRPA-205ENST00000598923 IGDCC4Q8TDY8 1250 aa21.66■■□□□ 1.06
SNRPA-205ENST00000598923 TRIM43Q96BQ3 446 aaPredicted RBP21.66■■□□□ 1.06
SNRPA-205ENST00000598923 ABHD16BQ9H3Z7 469 aa21.66■■□□□ 1.06
SNRPA-205ENST00000598923 PRDM5Q9NQX1 630 aaPredicted RBP21.66■■□□□ 1.06
SNRPA-205ENST00000598923 GPHNQ9NQX3 736 aaPredicted RBP21.66■■□□□ 1.06
SNRPA-205ENST00000598923 ZHX1Q9UKY1 873 aaPredicted RBP21.66■■□□□ 1.06
SNRPA-205ENST00000598923 ADCY6O43306 1168 aa21.65■■□□□ 1.06
SNRPA-205ENST00000598923 DUSP11O75319 330 aaKnown RBP21.65■■□□□ 1.06
SNRPA-205ENST00000598923 COL9A3Q14050 684 aaPredicted RBP21.65■■□□□ 1.06
SNRPA-205ENST00000598923 USH1GQ495M9 461 aa21.65■■□□□ 1.06
SNRPA-205ENST00000598923 ARMCX2Q7L311 632 aa21.65■■□□□ 1.06
SNRPA-205ENST00000598923 CATIPQ7Z7H3 387 aa21.65■■□□□ 1.06
SNRPA-205ENST00000598923 NUP133Q8WUM0 1156 aa21.65■■□□□ 1.06
SNRPA-205ENST00000598923 BADQ92934 168 aa21.65■■□□□ 1.06
SNRPA-205ENST00000598923 KATNBL1Q9H079 304 aa21.65■■□□□ 1.06
SNRPA-205ENST00000598923 KLRF2D3W0D1 207 aa21.64■■□□□ 1.05
SNRPA-205ENST00000598923 ACLYP53396 1101 aa21.64■■□□□ 1.05
SNRPA-205ENST00000598923 CDC37Q16543 378 aaPredicted RBP21.64■■□□□ 1.05
SNRPA-205ENST00000598923 CCDC144BQ3MJ40 725 aa21.64■■□□□ 1.05
SNRPA-205ENST00000598923 NFXL1Q6ZNB6 911 aa21.64■■□□□ 1.05
SNRPA-205ENST00000598923 LRRC2Q9BYS8 371 aa21.64■■□□□ 1.05
SNRPA-205ENST00000598923 MTMR10Q9NXD2 777 aa21.64■■□□□ 1.05
SNRPA-205ENST00000598923 MAD2L2Q9UI95 211 aa21.64■■□□□ 1.05
SNRPA-205ENST00000598923 PTPDC1A2A3K4 754 aa21.63■■□□□ 1.05
SNRPA-205ENST00000598923 MYADML2A6NDP7 307 aa21.63■■□□□ 1.05
SNRPA-205ENST00000598923 MOXD2PA6NHM9 499 aa21.63■■□□□ 1.05
SNRPA-205ENST00000598923 NFIBO00712 420 aa21.63■■□□□ 1.05
SNRPA-205ENST00000598923 CST5P28325 142 aaPredicted RBP21.63■■□□□ 1.05
SNRPA-205ENST00000598923 BAATQ14032 418 aaPredicted RBP21.63■■□□□ 1.05
SNRPA-205ENST00000598923 CCDC144CPQ8IYA2 1237 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms