RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 UBA5Q9GZZ9 404 aa12.31□□□□□ -0.44
CCDC9-203ENST00000596938 ZHX1Q9UKY1 873 aaPredicted RBP12.31□□□□□ -0.44
CCDC9-203ENST00000596938 ZMYND8Q9ULU4 1186 aaPredicted RBP12.31□□□□□ -0.44
CCDC9-203ENST00000596938 MYH4Q9Y623 1939 aa12.31□□□□□ -0.44
CCDC9-203ENST00000596938 E7EWF7 191 aa12.3□□□□□ -0.44
CCDC9-203ENST00000596938 NFIBO00712 420 aa12.3□□□□□ -0.44
CCDC9-203ENST00000596938 PARP1P09874 1014 aaKnown RBP12.3□□□□□ -0.44
CCDC9-203ENST00000596938 SYN1P17600 705 aa12.3□□□□□ -0.44
CCDC9-203ENST00000596938 FXR1P51114 621 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCDC9-203ENST00000596938 NKX3-2P78367 333 aa12.3□□□□□ -0.44
CCDC9-203ENST00000596938 BAATQ14032 418 aaPredicted RBP12.3□□□□□ -0.44
CCDC9-203ENST00000596938 BMP2KLQ5H9B9 411 aa12.3□□□□□ -0.44
CCDC9-203ENST00000596938 CCSAPQ6IQ19 270 aaPredicted RBP12.3□□□□□ -0.44
CCDC9-203ENST00000596938 KIAA1211Q6ZU35 1233 aa12.3□□□□□ -0.44
CCDC9-203ENST00000596938 ADGRF4Q8IZF3 695 aa12.3□□□□□ -0.44
CCDC9-203ENST00000596938 NCOA7Q8NI08 942 aa12.3□□□□□ -0.44
CCDC9-203ENST00000596938 ADD3Q9UEY8 706 aaKnown RBP12.3□□□□□ -0.44
CCDC9-203ENST00000596938 ASTN1O14525 1302 aa12.3□□□□□ -0.44
CCDC9-203ENST00000596938 COL11A1P12107 1806 aaPredicted RBP12.3□□□□□ -0.44
CCDC9-203ENST00000596938 MOXD2PA6NHM9 499 aa12.29□□□□□ -0.44
CCDC9-203ENST00000596938 CST5P28325 142 aaPredicted RBP12.29□□□□□ -0.44
CCDC9-203ENST00000596938 GJA9P57773 515 aa12.29□□□□□ -0.44
CCDC9-203ENST00000596938 RTP1P59025 263 aa12.29□□□□□ -0.44
CCDC9-203ENST00000596938 IQSEC1Q6DN90 963 aa12.29□□□□□ -0.44
CCDC9-203ENST00000596938 FERMT2Q96AC1 680 aa12.29□□□□□ -0.44
CCDC9-203ENST00000596938 ESYT1Q9BSJ8 1104 aa12.29□□□□□ -0.44
CCDC9-203ENST00000596938 UPF3AQ9H1J1 476 aaKnown RBP12.29□□□□□ -0.44
CCDC9-203ENST00000596938 SPC25Q9HBM1 224 aa12.29□□□□□ -0.44
CCDC9-203ENST00000596938 SYNRGQ9UMZ2 1314 aa12.29□□□□□ -0.44
CCDC9-203ENST00000596938 ERICH2A1L162 156 aa12.28□□□□□ -0.44
CCDC9-203ENST00000596938 IFIT3O14879 490 aaKnown RBP12.28□□□□□ -0.44
CCDC9-203ENST00000596938 ADCY6O43306 1168 aa12.28□□□□□ -0.44
CCDC9-203ENST00000596938 MAGEA10P43363 369 aaPredicted RBP12.28□□□□□ -0.44
CCDC9-203ENST00000596938 ACLYP53396 1101 aa12.28□□□□□ -0.44
CCDC9-203ENST00000596938 TNFAIP2Q03169 654 aa12.28□□□□□ -0.44
CCDC9-203ENST00000596938 SART3Q15020 963 aaKnown RBP12.28□□□□□ -0.44
CCDC9-203ENST00000596938 KCNA10Q16322 511 aa12.28□□□□□ -0.44
CCDC9-203ENST00000596938 CDC37Q16543 378 aaPredicted RBP12.28□□□□□ -0.44
CCDC9-203ENST00000596938 TAPT1Q6NXT6 567 aa12.28□□□□□ -0.44
CCDC9-203ENST00000596938 RNF207Q6ZRF8 634 aa12.28□□□□□ -0.44
CCDC9-203ENST00000596938 RALYLQ86SE5 291 aaKnown RBP12.28□□□□□ -0.44
CCDC9-203ENST00000596938 PCSK9Q8NBP7 692 aaKnown RBP12.28□□□□□ -0.44
CCDC9-203ENST00000596938 DNERQ8NFT8 737 aa12.28□□□□□ -0.44
CCDC9-203ENST00000596938 IGDCC4Q8TDY8 1250 aa12.28□□□□□ -0.44
CCDC9-203ENST00000596938 NUP133Q8WUM0 1156 aa12.28□□□□□ -0.44
CCDC9-203ENST00000596938 LENG1Q96BZ8 264 aaPredicted RBP12.28□□□□□ -0.44
CCDC9-203ENST00000596938 PURBQ96QR8 312 aaKnown RBP12.28□□□□□ -0.44
CCDC9-203ENST00000596938 MTA3Q9BTC8 594 aa12.28□□□□□ -0.44
CCDC9-203ENST00000596938 LSG1Q9H089 658 aaKnown RBP12.28□□□□□ -0.44
CCDC9-203ENST00000596938 CPVLQ9H3G5 476 aa12.28□□□□□ -0.44
CCDC9-203ENST00000596938 JMJD4Q9H9V9 463 aa12.28□□□□□ -0.44
CCDC9-203ENST00000596938 ATP11BQ9Y2G3 1177 aa12.28□□□□□ -0.44
CCDC9-203ENST00000596938 Q9Y3F1 56 aa12.28□□□□□ -0.44
CCDC9-203ENST00000596938 RBM8AQ9Y5S9 174 aaKnown RBP12.28□□□□□ -0.44
CCDC9-203ENST00000596938 TAF6LQ9Y6J9 622 aa12.28□□□□□ -0.44
CCDC9-203ENST00000596938 A0A1W2PQ45 241 aaPredicted RBP12.27□□□□□ -0.45
CCDC9-203ENST00000596938 A0A1W2PQY0 241 aa12.27□□□□□ -0.45
CCDC9-203ENST00000596938 PTPDC1A2A3K4 754 aa12.27□□□□□ -0.45
CCDC9-203ENST00000596938 PALM3A6NDB9 673 aaPredicted RBP12.27□□□□□ -0.45
CCDC9-203ENST00000596938 KLRF2D3W0D1 207 aa12.27□□□□□ -0.45
CCDC9-203ENST00000596938 CTAGE5O15320 804 aa12.27□□□□□ -0.45
CCDC9-203ENST00000596938 ALDH5A1P51649 535 aaPredicted RBP12.27□□□□□ -0.45
CCDC9-203ENST00000596938 RPS6P62753 249 aaKnown RBP12.27□□□□□ -0.45
CCDC9-203ENST00000596938 TRIM60Q495X7 471 aa12.27□□□□□ -0.45
CCDC9-203ENST00000596938 STOX1Q6ZVD7 989 aa12.27□□□□□ -0.45
CCDC9-203ENST00000596938 MCF2L2Q86YR7 1114 aa12.27□□□□□ -0.45
CCDC9-203ENST00000596938 STAG2Q8N3U4 1231 aa12.27□□□□□ -0.45
CCDC9-203ENST00000596938 MTMR8Q96EF0 704 aa12.27□□□□□ -0.45
CCDC9-203ENST00000596938 VTA1Q9NP79 307 aa12.27□□□□□ -0.45
CCDC9-203ENST00000596938 PRKAG2Q9UGJ0 569 aa12.27□□□□□ -0.45
CCDC9-203ENST00000596938 MAD2L2Q9UI95 211 aa12.27□□□□□ -0.45
CCDC9-203ENST00000596938 GNEQ9Y223 722 aaKnown RBP12.27□□□□□ -0.45
CCDC9-203ENST00000596938 ELP1O95163 1332 aa12.27□□□□□ -0.45
CCDC9-203ENST00000596938 ABCB11O95342 1321 aa12.27□□□□□ -0.45
CCDC9-203ENST00000596938 LAMA3Q16787 3333 aa12.26□□□□□ -0.45
CCDC9-203ENST00000596938 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.26□□□□□ -0.45
CCDC9-203ENST00000596938 RBM47A0AV96 593 aaKnown RBP12.26□□□□□ -0.45
CCDC9-203ENST00000596938 B4DLN1 442 aa12.26□□□□□ -0.45
CCDC9-203ENST00000596938 C6orf222P0C671 652 aaPredicted RBP12.26□□□□□ -0.45
CCDC9-203ENST00000596938 EDNRBP24530 442 aa12.26□□□□□ -0.45
CCDC9-203ENST00000596938 CALML3P27482 149 aa12.26□□□□□ -0.45
CCDC9-203ENST00000596938 MRPL12P52815 198 aaKnown RBP12.26□□□□□ -0.45
CCDC9-203ENST00000596938 TLE2Q04725 743 aa12.26□□□□□ -0.45
CCDC9-203ENST00000596938 TROAPQ12815 778 aa12.26□□□□□ -0.45
CCDC9-203ENST00000596938 WTAPQ15007 396 aa12.26□□□□□ -0.45
CCDC9-203ENST00000596938 NECTIN1Q15223 517 aa12.26□□□□□ -0.45
CCDC9-203ENST00000596938 QRICH1Q2TAL8 776 aa12.26□□□□□ -0.45
CCDC9-203ENST00000596938 USH1GQ495M9 461 aa12.26□□□□□ -0.45
CCDC9-203ENST00000596938 GNASQ5JWF2 1037 aa12.26□□□□□ -0.45
CCDC9-203ENST00000596938 SLC30A10Q6XR72 485 aa12.26□□□□□ -0.45
CCDC9-203ENST00000596938 ANKRD33Q7Z3H0 272 aa12.26□□□□□ -0.45
CCDC9-203ENST00000596938 FBXO11Q86XK2 927 aa12.26□□□□□ -0.45
CCDC9-203ENST00000596938 MB21D2Q8IYB1 491 aaPredicted RBP12.26□□□□□ -0.45
CCDC9-203ENST00000596938 TOX2Q96NM4 488 aa12.26□□□□□ -0.45
CCDC9-203ENST00000596938 MPHOSPH6Q99547 160 aaKnown RBP12.26□□□□□ -0.45
CCDC9-203ENST00000596938 LBHD1Q9BQE6 289 aaPredicted RBP12.26□□□□□ -0.45
CCDC9-203ENST00000596938 VAT1LQ9HCJ6 419 aa12.26□□□□□ -0.45
CCDC9-203ENST00000596938 PDGFCQ9NRA1 345 aa12.26□□□□□ -0.45
CCDC9-203ENST00000596938 MRPL11Q9Y3B7 192 aaKnown RBP12.26□□□□□ -0.45
CCDC9-203ENST00000596938 ZNFX1Q9P2E3 1918 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms