RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 MAD2L2Q9UI95 211 aa21.6■■□□□ 1.05
SHKBP1-202ENST00000593764 PNMA2Q9UL42 364 aa21.6■■□□□ 1.05
SHKBP1-202ENST00000593764 RANBP2P49792 3224 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-202ENST00000593764 PALM3A6NDB9 673 aaPredicted RBP21.59■■□□□ 1.05
SHKBP1-202ENST00000593764 AKR1A1P14550 325 aa21.59■■□□□ 1.05
SHKBP1-202ENST00000593764 BAATQ14032 418 aaPredicted RBP21.59■■□□□ 1.05
SHKBP1-202ENST00000593764 LRRC41Q15345 812 aa21.59■■□□□ 1.05
SHKBP1-202ENST00000593764 LENG1Q96BZ8 264 aaPredicted RBP21.59■■□□□ 1.05
SHKBP1-202ENST00000593764 SENP6Q9GZR1 1112 aaPredicted RBP21.59■■□□□ 1.05
SHKBP1-202ENST00000593764 ABHD16BQ9H3Z7 469 aa21.59■■□□□ 1.05
SHKBP1-202ENST00000593764 JMJD4Q9H9V9 463 aa21.59■■□□□ 1.05
SHKBP1-202ENST00000593764 NR2E3Q9Y5X4 410 aa21.59■■□□□ 1.05
SHKBP1-202ENST00000593764 DDX49Q9Y6V7 483 aaKnown RBP21.59■■□□□ 1.05
SHKBP1-202ENST00000593764 ERICH2A1L162 156 aa21.58■■□□□ 1.05
SHKBP1-202ENST00000593764 KLRF2D3W0D1 207 aa21.58■■□□□ 1.05
SHKBP1-202ENST00000593764 RARBP10826 455 aa21.58■■□□□ 1.05
SHKBP1-202ENST00000593764 TROAPQ12815 778 aa21.58■■□□□ 1.05
SHKBP1-202ENST00000593764 WTAPQ15007 396 aa21.58■■□□□ 1.05
SHKBP1-202ENST00000593764 SART3Q15020 963 aaKnown RBP21.58■■□□□ 1.05
SHKBP1-202ENST00000593764 CDC37Q16543 378 aaPredicted RBP21.58■■□□□ 1.05
SHKBP1-202ENST00000593764 LRRC26Q2I0M4 334 aa21.58■■□□□ 1.05
SHKBP1-202ENST00000593764 TMEM67Q5HYA8 995 aa21.58■■□□□ 1.05
SHKBP1-202ENST00000593764 GPHNQ9NQX3 736 aaPredicted RBP21.58■■□□□ 1.05
SHKBP1-202ENST00000593764 ZHX1Q9UKY1 873 aaPredicted RBP21.58■■□□□ 1.05
SHKBP1-202ENST00000593764 FAM184BQ9ULE4 1060 aa21.58■■□□□ 1.05
SHKBP1-202ENST00000593764 LCTP09848 1927 aa21.57■■□□□ 1.04
SHKBP1-202ENST00000593764 ASB14A6NK59 587 aa21.57■■□□□ 1.04
SHKBP1-202ENST00000593764 ADCY6O43306 1168 aa21.57■■□□□ 1.04
SHKBP1-202ENST00000593764 SLC35G1Q2M3R5 365 aa21.57■■□□□ 1.04
SHKBP1-202ENST00000593764 QRICH1Q2TAL8 776 aa21.57■■□□□ 1.04
SHKBP1-202ENST00000593764 VAT1LQ9HCJ6 419 aa21.57■■□□□ 1.04
SHKBP1-202ENST00000593764 XPNPEP3Q9NQH7 507 aa21.57■■□□□ 1.04
SHKBP1-202ENST00000593764 PGK1P00558 417 aa21.56■■□□□ 1.04
SHKBP1-202ENST00000593764 GRM4Q14833 912 aa21.56■■□□□ 1.04
SHKBP1-202ENST00000593764 CCDC144BQ3MJ40 725 aa21.56■■□□□ 1.04
SHKBP1-202ENST00000593764 USH1GQ495M9 461 aa21.56■■□□□ 1.04
SHKBP1-202ENST00000593764 CASC1Q6TDU7 716 aa21.56■■□□□ 1.04
SHKBP1-202ENST00000593764 SLC30A10Q6XR72 485 aa21.56■■□□□ 1.04
SHKBP1-202ENST00000593764 MORC4Q8TE76 937 aa21.56■■□□□ 1.04
SHKBP1-202ENST00000593764 MTMR8Q96EF0 704 aa21.56■■□□□ 1.04
SHKBP1-202ENST00000593764 MTA3Q9BTC8 594 aa21.56■■□□□ 1.04
SHKBP1-202ENST00000593764 LY9Q9HBG7 655 aa21.56■■□□□ 1.04
SHKBP1-202ENST00000593764 PTPDC1A2A3K4 754 aa21.55■■□□□ 1.04
SHKBP1-202ENST00000593764 KBTBD13C9JR72 458 aa21.55■■□□□ 1.04
SHKBP1-202ENST00000593764 PRC1O43663 620 aa21.55■■□□□ 1.04
SHKBP1-202ENST00000593764 ADAMTS4O75173 837 aa21.55■■□□□ 1.04
SHKBP1-202ENST00000593764 MCM5P33992 734 aa21.55■■□□□ 1.04
SHKBP1-202ENST00000593764 RPS6P62753 249 aaKnown RBP21.55■■□□□ 1.04
SHKBP1-202ENST00000593764 C7orf61Q8IZ16 206 aa21.55■■□□□ 1.04
SHKBP1-202ENST00000593764 RGS22Q8NE09 1264 aa21.55■■□□□ 1.04
SHKBP1-202ENST00000593764 PPP4R2Q9NY27 417 aa21.55■■□□□ 1.04
SHKBP1-202ENST00000593764 DUSP11O75319 330 aaKnown RBP21.54■■□□□ 1.04
SHKBP1-202ENST00000593764 MYCNP04198 464 aaPredicted RBP21.54■■□□□ 1.04
SHKBP1-202ENST00000593764 ERICH6BQ5W0A0 696 aa21.54■■□□□ 1.04
SHKBP1-202ENST00000593764 RNF207Q6ZRF8 634 aa21.54■■□□□ 1.04
SHKBP1-202ENST00000593764 TBC1D5Q92609 795 aa21.54■■□□□ 1.04
SHKBP1-202ENST00000593764 COLQQ9Y215 455 aaPredicted RBP21.54■■□□□ 1.04
SHKBP1-202ENST00000593764 BAZ2BQ9UIF8 2168 aaKnown RBP21.53■■□□□ 1.04
SHKBP1-202ENST00000593764 CYTH3O43739 400 aa21.53■■□□□ 1.04
SHKBP1-202ENST00000593764 DHX16O60231 1041 aaKnown RBP21.53■■□□□ 1.04
SHKBP1-202ENST00000593764 CALML3P27482 149 aa21.53■■□□□ 1.04
SHKBP1-202ENST00000593764 ADCYAP1R1P41586 468 aa21.53■■□□□ 1.04
SHKBP1-202ENST00000593764 ALDH5A1P51649 535 aaPredicted RBP21.53■■□□□ 1.04
SHKBP1-202ENST00000593764 ATN1P54259 1190 aaPredicted RBP21.53■■□□□ 1.04
SHKBP1-202ENST00000593764 TSGA10IPQ3SY00 556 aa21.53■■□□□ 1.04
SHKBP1-202ENST00000593764 CATIPQ7Z7H3 387 aa21.53■■□□□ 1.04
SHKBP1-202ENST00000593764 RNF180Q86T96 592 aa21.53■■□□□ 1.04
SHKBP1-202ENST00000593764 FBXO11Q86XK2 927 aa21.53■■□□□ 1.04
SHKBP1-202ENST00000593764 RASEFQ8IZ41 740 aa21.53■■□□□ 1.04
SHKBP1-202ENST00000593764 KLHDC9Q8NEP7 349 aa21.53■■□□□ 1.04
SHKBP1-202ENST00000593764 RIOX1Q9H6W3 641 aa21.53■■□□□ 1.04
SHKBP1-202ENST00000593764 ADD3Q9UEY8 706 aaKnown RBP21.53■■□□□ 1.04
SHKBP1-202ENST00000593764 ABCB11O95342 1321 aa21.53■■□□□ 1.04
SHKBP1-202ENST00000593764 SYNRGQ9UMZ2 1314 aa21.53■■□□□ 1.04
SHKBP1-202ENST00000593764 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.52■■□□□ 1.04
SHKBP1-202ENST00000593764 SH2B2O14492 632 aaPredicted RBP21.52■■□□□ 1.04
SHKBP1-202ENST00000593764 PPP1R11O60927 126 aaPredicted RBP21.52■■□□□ 1.04
SHKBP1-202ENST00000593764 IRX5P78411 483 aaPredicted RBP21.52■■□□□ 1.04
SHKBP1-202ENST00000593764 RNF20Q5VTR2 975 aa21.52■■□□□ 1.04
SHKBP1-202ENST00000593764 CCSAPQ6IQ19 270 aaPredicted RBP21.52■■□□□ 1.04
SHKBP1-202ENST00000593764 TAPT1Q6NXT6 567 aa21.52■■□□□ 1.04
SHKBP1-202ENST00000593764 SLC39A5Q6ZMH5 540 aa21.52■■□□□ 1.04
SHKBP1-202ENST00000593764 TMEM87BQ96K49 555 aa21.52■■□□□ 1.04
SHKBP1-202ENST00000593764 MAF1Q9H063 256 aa21.52■■□□□ 1.04
SHKBP1-202ENST00000593764 PRO3102Q9H379 93 aa21.52■■□□□ 1.04
SHKBP1-202ENST00000593764 PDGFCQ9NRA1 345 aa21.52■■□□□ 1.04
SHKBP1-202ENST00000593764 PHF24Q9UPV7 400 aa21.52■■□□□ 1.04
SHKBP1-202ENST00000593764 LOC102724159A0A0B4J2E5 919 aa21.51■■□□□ 1.03
SHKBP1-202ENST00000593764 MYADML2A6NDP7 307 aa21.51■■□□□ 1.03
SHKBP1-202ENST00000593764 ZBTB5O15062 677 aa21.51■■□□□ 1.03
SHKBP1-202ENST00000593764 CENPBP07199 599 aaPredicted RBP21.51■■□□□ 1.03
SHKBP1-202ENST00000593764 LIFRP42702 1097 aa21.51■■□□□ 1.03
SHKBP1-202ENST00000593764 PWP2Q15269 919 aaKnown RBP21.51■■□□□ 1.03
SHKBP1-202ENST00000593764 CHRDL2Q6WN34 429 aa21.51■■□□□ 1.03
SHKBP1-202ENST00000593764 EEPD1Q7L9B9 569 aa21.51■■□□□ 1.03
SHKBP1-202ENST00000593764 FBXO16Q8IX29 292 aaPredicted RBP21.51■■□□□ 1.03
SHKBP1-202ENST00000593764 ZNF654Q8IZM8 581 aa21.51■■□□□ 1.03
SHKBP1-202ENST00000593764 TMTC2Q8N394 836 aa21.51■■□□□ 1.03
SHKBP1-202ENST00000593764 FERMT2Q96AC1 680 aa21.51■■□□□ 1.03
SHKBP1-202ENST00000593764 MAP3K14Q99558 947 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms