RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 UPF3AQ9H1J1 476 aaKnown RBP16.2■□□□□ 0.18
HDAC5-208ENST00000588419 TTYH1Q9H313 450 aaPredicted RBP16.2■□□□□ 0.18
HDAC5-208ENST00000588419 ELP1O95163 1332 aa16.19■□□□□ 0.18
HDAC5-208ENST00000588419 A0A0D9SFI3 127 aa16.19■□□□□ 0.18
HDAC5-208ENST00000588419 ASB14A6NK59 587 aa16.19■□□□□ 0.18
HDAC5-208ENST00000588419 TRIM6-TRIM34B2RNG4 842 aa16.19■□□□□ 0.18
HDAC5-208ENST00000588419 TIMP1P01033 207 aa16.19■□□□□ 0.18
HDAC5-208ENST00000588419 RILPL2Q969X0 211 aa16.19■□□□□ 0.18
HDAC5-208ENST00000588419 PURBQ96QR8 312 aaKnown RBP16.19■□□□□ 0.18
HDAC5-208ENST00000588419 KATNBL1Q9H079 304 aa16.19■□□□□ 0.18
HDAC5-208ENST00000588419 AP5M1Q9H0R1 490 aa16.19■□□□□ 0.18
HDAC5-208ENST00000588419 GPCPD1Q9NPB8 672 aa16.19■□□□□ 0.18
HDAC5-208ENST00000588419 ARVCFO00192 962 aa16.18■□□□□ 0.18
HDAC5-208ENST00000588419 ACRP10323 421 aa16.18■□□□□ 0.18
HDAC5-208ENST00000588419 PDE1AP54750 535 aa16.18■□□□□ 0.18
HDAC5-208ENST00000588419 TTBK2Q6IQ55 1244 aa16.18■□□□□ 0.18
HDAC5-208ENST00000588419 CXCL17Q6UXB2 119 aa16.18■□□□□ 0.18
HDAC5-208ENST00000588419 DCAF4Q8WV16 495 aa16.18■□□□□ 0.18
HDAC5-208ENST00000588419 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.18■□□□□ 0.182e-7■■□□□ 12.2
HDAC5-208ENST00000588419 LNPKQ9C0E8 428 aa16.18■□□□□ 0.18
HDAC5-208ENST00000588419 HELLSQ9NRZ9 838 aa16.18■□□□□ 0.18
HDAC5-208ENST00000588419 CYP39A1Q9NYL5 469 aa16.18■□□□□ 0.18
HDAC5-208ENST00000588419 TBX21Q9UL17 535 aa16.18■□□□□ 0.18
HDAC5-208ENST00000588419 ASTN1O14525 1302 aa16.18■□□□□ 0.18
HDAC5-208ENST00000588419 MYO9BQ13459 2157 aa16.17■□□□□ 0.18
HDAC5-208ENST00000588419 PTPDC1A2A3K4 754 aa16.17■□□□□ 0.18
HDAC5-208ENST00000588419 DYNC1LI2O43237 492 aaPredicted RBP16.17■□□□□ 0.18
HDAC5-208ENST00000588419 CSF2RAP15509 400 aa16.17■□□□□ 0.18
HDAC5-208ENST00000588419 DNAJB2P25686 324 aa16.17■□□□□ 0.18
HDAC5-208ENST00000588419 NMIQ13287 307 aaPredicted RBP16.17■□□□□ 0.18
HDAC5-208ENST00000588419 PPIGQ13427 754 aaKnown RBP eCLIP16.17■□□□□ 0.183e-7■■■■□ 23.9
HDAC5-208ENST00000588419 SYDE2Q5VT97 1194 aa16.17■□□□□ 0.18
HDAC5-208ENST00000588419 MFSD5Q6N075 450 aa16.17■□□□□ 0.18
HDAC5-208ENST00000588419 FAM126BQ8IXS8 530 aa16.17■□□□□ 0.18
HDAC5-208ENST00000588419 TMEM199Q8N511 208 aa16.17■□□□□ 0.18
HDAC5-208ENST00000588419 COL25A1Q9BXS0 654 aaPredicted RBP16.17■□□□□ 0.18
HDAC5-208ENST00000588419 PDGFCQ9NRA1 345 aa16.17■□□□□ 0.18
HDAC5-208ENST00000588419 ANAPC4Q9UJX5 808 aa16.17■□□□□ 0.18
HDAC5-208ENST00000588419 SCN5AQ14524 2016 aa16.17■□□□□ 0.18
HDAC5-208ENST00000588419 CTAGE5O15320 804 aa16.16■□□□□ 0.18
HDAC5-208ENST00000588419 ORC4O43929 436 aa16.16■□□□□ 0.18
HDAC5-208ENST00000588419 PLA2G6O60733 806 aa16.16■□□□□ 0.18
HDAC5-208ENST00000588419 ICAM1P05362 532 aa16.16■□□□□ 0.18
HDAC5-208ENST00000588419 SMPD1P17405 629 aa16.16■□□□□ 0.18
HDAC5-208ENST00000588419 CYP2C18P33260 490 aa16.16■□□□□ 0.18
HDAC5-208ENST00000588419 FSCN1Q16658 493 aaKnown RBP16.16■□□□□ 0.18
HDAC5-208ENST00000588419 MCMDC2Q4G0Z9 681 aa16.16■□□□□ 0.18
HDAC5-208ENST00000588419 B4GALNT3Q6L9W6 998 aa16.16■□□□□ 0.18
HDAC5-208ENST00000588419 ZNF589Q86UQ0 364 aaPredicted RBP16.16■□□□□ 0.18
HDAC5-208ENST00000588419 YTHDC1Q96MU7 727 aaKnown RBP16.16■□□□□ 0.18
HDAC5-208ENST00000588419 TMEM47Q9BQJ4 181 aa16.16■□□□□ 0.18
HDAC5-208ENST00000588419 UNC80Q8N2C7 3258 aa16.16■□□□□ 0.18
HDAC5-208ENST00000588419 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.15■□□□□ 0.18
HDAC5-208ENST00000588419 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.15■□□□□ 0.18
HDAC5-208ENST00000588419 NFIBO00712 420 aa16.15■□□□□ 0.18
HDAC5-208ENST00000588419 ZEB2O60315 1214 aa16.15■□□□□ 0.18
HDAC5-208ENST00000588419 FGAP02671 866 aa16.15■□□□□ 0.18
HDAC5-208ENST00000588419 HSPD1P10809 573 aaKnown RBP16.15■□□□□ 0.18
HDAC5-208ENST00000588419 TOP1P11387 765 aaKnown RBP16.15■□□□□ 0.18
HDAC5-208ENST00000588419 CALML3P27482 149 aa16.15■□□□□ 0.18
HDAC5-208ENST00000588419 CDK7P50613 346 aa16.15■□□□□ 0.18
HDAC5-208ENST00000588419 PSMC6P62333 389 aa16.15■□□□□ 0.18
HDAC5-208ENST00000588419 BAATQ14032 418 aaPredicted RBP16.15■□□□□ 0.18
HDAC5-208ENST00000588419 TMEM63BQ5T3F8 832 aa16.15■□□□□ 0.18
HDAC5-208ENST00000588419 KIAA1211Q6ZU35 1233 aa16.15■□□□□ 0.18
HDAC5-208ENST00000588419 RANBP17Q9H2T7 1088 aaKnown RBP16.15■□□□□ 0.18
HDAC5-208ENST00000588419 GNEQ9Y223 722 aaKnown RBP16.15■□□□□ 0.18
HDAC5-208ENST00000588419 EYSQ5T1H1 3165 aa16.15■□□□□ 0.18
HDAC5-208ENST00000588419 CCDC171Q6TFL3 1326 aa16.15■□□□□ 0.18
HDAC5-208ENST00000588419 CDH23Q9H251 3354 aa16.15■□□□□ 0.18
HDAC5-208ENST00000588419 GRXCR1A8MXD5 290 aa16.14■□□□□ 0.17
HDAC5-208ENST00000588419 ALDH5A1P51649 535 aaPredicted RBP16.14■□□□□ 0.17
HDAC5-208ENST00000588419 ITGA7Q13683 1181 aa16.14■□□□□ 0.17
HDAC5-208ENST00000588419 TMEM240Q5SV17 173 aa16.14■□□□□ 0.17
HDAC5-208ENST00000588419 SLC30A10Q6XR72 485 aa16.14■□□□□ 0.17
HDAC5-208ENST00000588419 TIFAQ96CG3 184 aa16.14■□□□□ 0.17
HDAC5-208ENST00000588419 ZKSCAN3Q9BRR0 538 aa16.14■□□□□ 0.17
HDAC5-208ENST00000588419 UMODL1Q5DID0 1318 aa16.14■□□□□ 0.17
HDAC5-208ENST00000588419 TANC1Q9C0D5 1861 aa16.14■□□□□ 0.17
HDAC5-208ENST00000588419 KIAA1217Q5T5P2 1943 aa16.13■□□□□ 0.17
HDAC5-208ENST00000588419 TMEM265A0A087WTH1 108 aa16.13■□□□□ 0.17
HDAC5-208ENST00000588419 PBX2P40425 430 aa16.13■□□□□ 0.17
HDAC5-208ENST00000588419 CCL23P55773 120 aa16.13■□□□□ 0.17
HDAC5-208ENST00000588419 HDAC1Q13547 482 aaPredicted RBP16.13■□□□□ 0.17
HDAC5-208ENST00000588419 GRIN2CQ14957 1233 aa16.13■□□□□ 0.17
HDAC5-208ENST00000588419 ALX1Q15699 326 aa16.13■□□□□ 0.17
HDAC5-208ENST00000588419 TAPT1Q6NXT6 567 aa16.13■□□□□ 0.17
HDAC5-208ENST00000588419 PSRC1Q6PGN9 363 aaPredicted RBP16.13■□□□□ 0.17
HDAC5-208ENST00000588419 MFSD6Q6ZSS7 791 aa16.13■□□□□ 0.17
HDAC5-208ENST00000588419 ZNF365Q70YC5 407 aa16.13■□□□□ 0.17
HDAC5-208ENST00000588419 TBC1D10CQ8IV04 446 aa16.13■□□□□ 0.17
HDAC5-208ENST00000588419 HIPK3Q9H422 1215 aa16.13■□□□□ 0.17
HDAC5-208ENST00000588419 VTA1Q9NP79 307 aa16.13■□□□□ 0.17
HDAC5-208ENST00000588419 ADD3Q9UEY8 706 aaKnown RBP16.13■□□□□ 0.17
HDAC5-208ENST00000588419 MYH7BA7E2Y1 1941 aa16.12■□□□□ 0.17
HDAC5-208ENST00000588419 B4GALT4O60513 344 aa16.12■□□□□ 0.17
HDAC5-208ENST00000588419 CABYRO75952 493 aa16.12■□□□□ 0.17
HDAC5-208ENST00000588419 MYL3P08590 195 aa16.12■□□□□ 0.17
HDAC5-208ENST00000588419 PDHBP11177 359 aa16.12■□□□□ 0.17
HDAC5-208ENST00000588419 USH1GQ495M9 461 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms