RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 RBBP6Q7Z6E9 1792 aaKnown RBP12.03□□□□□ -0.48
CCDC47-203ENST00000580986 ZNF236Q9UL36 1845 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 DEXIO95424 95 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 CTDNEP1O95476 244 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 SLC25A27O95847 323 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 CYP2C8P10632 490 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 ERVK-9P63128 1117 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 ERVK-24P63145 666 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 CCNA1P78396 465 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 CRHR2Q13324 411 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 BECN1Q14457 450 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 TMEM132BQ14DG7 1078 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 CDC37Q16543 378 aaPredicted RBP12.03□□□□□ -0.48
CCDC47-203ENST00000580986 PFKFB3Q16875 520 aaPredicted RBP12.03□□□□□ -0.48
CCDC47-203ENST00000580986 PPP1R18Q6NYC8 613 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 POTEEQ6S8J3 1075 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 NOL8Q76FK4 1167 aaKnown RBP12.03□□□□□ -0.48
CCDC47-203ENST00000580986 RAB11FIP4Q86YS3 637 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 RIOX2Q8IUF8 465 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 SAMD3Q8N6K7 520 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 NECAB1Q8N987 351 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 WASF1Q92558 559 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 AMNQ9BXJ7 453 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 SPATC1LQ9H0A9 340 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 RNF186Q9NXI6 227 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 RBPJLQ9UBG7 517 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 KIF3AQ9Y496 699 aa12.03□□□□□ -0.48
CCDC47-203ENST00000580986 PTPDC1A2A3K4 754 aa12.02□□□□□ -0.49
CCDC47-203ENST00000580986 CNMDO75829 334 aa12.02□□□□□ -0.49
CCDC47-203ENST00000580986 SCG2P13521 617 aa12.02□□□□□ -0.49
CCDC47-203ENST00000580986 AKAP17AQ02040 695 aaKnown RBP12.02□□□□□ -0.49
CCDC47-203ENST00000580986 GHRHRQ02643 423 aa12.02□□□□□ -0.49
CCDC47-203ENST00000580986 SSRP1Q08945 709 aaKnown RBP12.02□□□□□ -0.49
CCDC47-203ENST00000580986 QRICH1Q2TAL8 776 aa12.02□□□□□ -0.49
CCDC47-203ENST00000580986 FBXO11Q86XK2 927 aa12.02□□□□□ -0.49
CCDC47-203ENST00000580986 CCDC83Q8IWF9 413 aa12.02□□□□□ -0.49
CCDC47-203ENST00000580986 GPRC5AQ8NFJ5 357 aa12.02□□□□□ -0.49
CCDC47-203ENST00000580986 PIGSQ96S52 555 aa12.02□□□□□ -0.49
CCDC47-203ENST00000580986 CPVLQ9H3G5 476 aa12.02□□□□□ -0.49
CCDC47-203ENST00000580986 SH3GLB2Q9NR46 395 aa12.02□□□□□ -0.49
CCDC47-203ENST00000580986 WBP1LQ9NX94 342 aa12.02□□□□□ -0.49
CCDC47-203ENST00000580986 MAP3K20Q9NYL2 800 aaKnown RBP12.02□□□□□ -0.49
CCDC47-203ENST00000580986 BTBD7Q9P203 1132 aa12.02□□□□□ -0.49
CCDC47-203ENST00000580986 FBXO40Q9UH90 709 aa12.02□□□□□ -0.49
CCDC47-203ENST00000580986 CTDP1Q9Y5B0 961 aaPredicted RBP12.02□□□□□ -0.49
CCDC47-203ENST00000580986 ABCB11O95342 1321 aa12.02□□□□□ -0.49
CCDC47-203ENST00000580986 ESYT2A0FGR8 921 aa12.01□□□□□ -0.49
CCDC47-203ENST00000580986 PDIA4P13667 645 aaKnown RBP12.01□□□□□ -0.49
CCDC47-203ENST00000580986 ANP32AP39687 249 aaKnown RBP12.01□□□□□ -0.49
CCDC47-203ENST00000580986 STAT3P40763 770 aa12.01□□□□□ -0.49
CCDC47-203ENST00000580986 PDAP1Q13442 181 aaKnown RBP12.01□□□□□ -0.49
CCDC47-203ENST00000580986 PKN1Q16512 942 aa12.01□□□□□ -0.49
CCDC47-203ENST00000580986 CMTR1Q8N1G2 835 aaKnown RBP12.01□□□□□ -0.49
CCDC47-203ENST00000580986 CHST13Q8NET6 341 aa12.01□□□□□ -0.49
CCDC47-203ENST00000580986 CCDC12Q8WUD4 166 aaPredicted RBP12.01□□□□□ -0.49
CCDC47-203ENST00000580986 BEGAINQ9BUH8 593 aa12.01□□□□□ -0.49
CCDC47-203ENST00000580986 SLC26A6Q9BXS9 759 aa12.01□□□□□ -0.49
CCDC47-203ENST00000580986 GLT8D2Q9H1C3 349 aa12.01□□□□□ -0.49
CCDC47-203ENST00000580986 MROH8Q9H579 483 aa12.01□□□□□ -0.49
CCDC47-203ENST00000580986 TXNRD2Q9NNW7 524 aa12.01□□□□□ -0.49
CCDC47-203ENST00000580986 TSHZ2Q9NRE2 1034 aa12.01□□□□□ -0.49
CCDC47-203ENST00000580986 BARHL2Q9NY43 387 aa12.01□□□□□ -0.49
CCDC47-203ENST00000580986 V9GY48 417 aaPredicted RBP12.01□□□□□ -0.49
CCDC47-203ENST00000580986 PPP1R11O60927 126 aaPredicted RBP12□□□□□ -0.49
CCDC47-203ENST00000580986 XBP1P17861 261 aa12□□□□□ -0.49
CCDC47-203ENST00000580986 MAPK4P31152 587 aa12□□□□□ -0.49
CCDC47-203ENST00000580986 SNRNP48Q6IEG0 339 aaKnown RBP12□□□□□ -0.49
CCDC47-203ENST00000580986 GALNT17Q6IS24 598 aa12□□□□□ -0.49
CCDC47-203ENST00000580986 HOMER1Q86YM7 354 aa12□□□□□ -0.49
CCDC47-203ENST00000580986 ABRAQ8N0Z2 381 aa12□□□□□ -0.49
CCDC47-203ENST00000580986 CCDC82Q8N4S0 544 aa12□□□□□ -0.49
CCDC47-203ENST00000580986 PHKBQ93100 1093 aa12□□□□□ -0.49
CCDC47-203ENST00000580986 MOV10L1Q9BXT6 1211 aaKnown RBP12□□□□□ -0.49
CCDC47-203ENST00000580986 ORC3Q9UBD5 711 aaPredicted RBP12□□□□□ -0.49
CCDC47-203ENST00000580986 CCPG1Q9ULG6 757 aa12□□□□□ -0.49
CCDC47-203ENST00000580986 CIZ1Q9ULV3 898 aaPredicted RBP12□□□□□ -0.49
CCDC47-203ENST00000580986 MRPL11Q9Y3B7 192 aaKnown RBP12□□□□□ -0.49
CCDC47-203ENST00000580986 BAZ2BQ9UIF8 2168 aaKnown RBP12□□□□□ -0.49
CCDC47-203ENST00000580986 STRNO43815 780 aa11.99□□□□□ -0.49
CCDC47-203ENST00000580986 TRPA1O75762 1119 aa11.99□□□□□ -0.49
CCDC47-203ENST00000580986 FDPSP14324 419 aaKnown RBP11.99□□□□□ -0.49
CCDC47-203ENST00000580986 ANKRD13CQ8N6S4 541 aa11.99□□□□□ -0.49
CCDC47-203ENST00000580986 CCDC148Q8NFR7 591 aa11.99□□□□□ -0.49
CCDC47-203ENST00000580986 SPOCK2Q92563 424 aa11.99□□□□□ -0.49
CCDC47-203ENST00000580986 PAGR1Q9BTK6 254 aa11.99□□□□□ -0.49
CCDC47-203ENST00000580986 RAVER2Q9HCJ3 691 aaKnown RBP11.99□□□□□ -0.49
CCDC47-203ENST00000580986 VAT1LQ9HCJ6 419 aa11.99□□□□□ -0.49
CCDC47-203ENST00000580986 PCDHA1Q9Y5I3 950 aa11.99□□□□□ -0.49
CCDC47-203ENST00000580986 MGAMO43451 1857 aa11.99□□□□□ -0.49
CCDC47-203ENST00000580986 PFASO15067 1338 aa11.98□□□□□ -0.49
CCDC47-203ENST00000580986 STXBP3O00186 592 aa11.98□□□□□ -0.49
CCDC47-203ENST00000580986 PIK3CDO00329 1044 aa11.98□□□□□ -0.49
CCDC47-203ENST00000580986 JAK2O60674 1132 aa11.98□□□□□ -0.49
CCDC47-203ENST00000580986 GNRH1P01148 92 aa11.98□□□□□ -0.49
CCDC47-203ENST00000580986 PDCP20941 246 aa11.98□□□□□ -0.49
CCDC47-203ENST00000580986 Q3C1V9 767 aa11.98□□□□□ -0.49
CCDC47-203ENST00000580986 WWC2Q6AWC2 1192 aa11.98□□□□□ -0.49
CCDC47-203ENST00000580986 MCTP2Q6DN12 878 aa11.98□□□□□ -0.49
CCDC47-203ENST00000580986 CCDC174Q6PII3 467 aa11.98□□□□□ -0.49
CCDC47-203ENST00000580986 MCF2L2Q86YR7 1114 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms