RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 ZNF827Q17R98 1081 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 PDZD4Q76G19 769 aaPredicted RBP11.74□□□□□ -0.53
SEC22B-201ENST00000578049 OTUD6AQ7L8S5 288 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 EPSTI1Q96J88 318 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 PLEKHG1Q9ULL1 1385 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 DNAJC8O75937 253 aaPredicted RBP11.74□□□□□ -0.53
SEC22B-201ENST00000578049 CCNE1P24864 410 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 PSMD2Q13200 908 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 C1orf112Q9NSG2 853 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 GGA1Q9UJY5 639 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 DIS3Q9Y2L1 958 aaKnown RBP11.74□□□□□ -0.53
SEC22B-201ENST00000578049 MAGI2Q86UL8 1455 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 CYP21A2P08686 494 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 ABCD1P33897 745 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 LIFRP42702 1097 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 PDE6CP51160 858 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 ARL6IP4Q66PJ3 421 aaKnown RBP11.74□□□□□ -0.53
SEC22B-201ENST00000578049 CCDC117Q8IWD4 279 aaPredicted RBP11.74□□□□□ -0.53
SEC22B-201ENST00000578049 CTAGE3PQ8IX95 158 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 ZNF594Q96JF6 807 aaPredicted RBP11.74□□□□□ -0.53
SEC22B-201ENST00000578049 MTA3Q9BTC8 594 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 RPAP1Q9BWH6 1393 aaPredicted RBP11.74□□□□□ -0.53
SEC22B-201ENST00000578049 LGR6Q9HBX8 967 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 PPP1R9AQ9ULJ8 1098 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 KDM5CP41229 1560 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 GAP43P17677 238 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 EHHADHQ08426 723 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 ICE2Q659A1 982 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 PNMA1Q8ND90 353 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 RUBCNQ92622 972 aa11.74□□□□□ -0.53
SEC22B-201ENST00000578049 TTC37Q6PGP7 1564 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 NR1D1P20393 614 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 DPH6Q7L8W6 267 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 KRT26Q7Z3Y9 468 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 NEK9Q8TD19 979 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 CHURC1Q8WUH1 139 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 DAPK3O43293 454 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 NDUFA10O95299 355 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 TADA2BQ86TJ2 420 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 DPH5Q9H2P9 285 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 PANK4Q9NVE7 773 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 ATP7BP35670 1465 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 ARHGAP42A6NI28 874 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 MYO1CO00159 1063 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 RASA3Q14644 834 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 ARHGAP44Q17R89 818 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 ADCK5Q3MIX3 580 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 CDKL2Q92772 493 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 IFT122Q9HBG6 1241 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 ZBTB21Q9ULJ3 1066 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 RFX7Q2KHR2 1363 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 CTNND1O60716 968 aaKnown RBP11.73□□□□□ -0.53
SEC22B-201ENST00000578049 CD19P15391 556 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 RBL2Q08999 1139 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 ZKSCAN8Q15776 578 aaPredicted RBP11.73□□□□□ -0.53
SEC22B-201ENST00000578049 TTLL7Q6ZT98 887 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 CNBD1Q8NA66 436 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 MGARPQ8TDB4 240 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 PSMD1Q99460 953 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.73□□□□□ -0.53
SEC22B-201ENST00000578049 USTQ9Y2C2 406 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 SRPRBQ9Y5M8 271 aaKnown RBP11.73□□□□□ -0.53
SEC22B-201ENST00000578049 VGLL3A8MV65 326 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 KIF11P52732 1056 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 ADGBQ8N7X0 1667 aa11.73□□□□□ -0.53
SEC22B-201ENST00000578049 GAS7O60861 476 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 CD2BP2O95400 341 aaKnown RBP11.72□□□□□ -0.53
SEC22B-201ENST00000578049 NNTQ13423 1086 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 CNPY4Q8N129 248 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 ADAM21Q9UKJ8 722 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 CHMP2AO43633 222 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 ATP5HO75947 161 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 ERCC3P19447 782 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 NBPF10Q6P3W6 841 aaKnown RBP11.72□□□□□ -0.53
SEC22B-201ENST00000578049 ARHGEF25Q86VW2 580 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 EPB41L5Q9HCM4 733 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 AATFQ9NY61 560 aaKnown RBP eCLIP11.72□□□□□ -0.53
SEC22B-201ENST00000578049 SCOCQ9UIL1 159 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 ATP10DQ9P241 1426 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 USP17L12C9JPN9 530 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 USP17L21D6R901 530 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 BUB1O43683 1085 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 SEC31AO94979 1220 aaKnown RBP11.72□□□□□ -0.53
SEC22B-201ENST00000578049 ABCB4P21439 1286 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 FGFR1OP2Q9NVK5 253 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 ABCA5Q8WWZ7 1642 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 OPHN1O60890 802 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 LMNAP02545 664 aaKnown RBP11.72□□□□□ -0.53
SEC22B-201ENST00000578049 CTSWP56202 376 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 CDC37Q16543 378 aaPredicted RBP11.72□□□□□ -0.53
SEC22B-201ENST00000578049 CCDC93Q567U6 631 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 FAM178BQ8IXR5 827 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 NLRP7Q8WX94 980 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 MAGOHBQ96A72 148 aaKnown RBP11.72□□□□□ -0.53
SEC22B-201ENST00000578049 MRRFQ96E11 262 aaKnown RBP11.72□□□□□ -0.53
SEC22B-201ENST00000578049 EIF4G3O43432 1585 aaKnown RBP11.72□□□□□ -0.53
SEC22B-201ENST00000578049 IFNB1P01574 187 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 RCAN1P53805 252 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 HNRNPH2P55795 449 aaKnown RBP11.72□□□□□ -0.53
SEC22B-201ENST00000578049 ADCY2Q08462 1091 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms