RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 TRMT44Q8IYL2 757 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-210ENST00000572824 EHBP1Q8NDI1 1231 aa11.13□□□□□ -0.63
NPLOC4-210ENST00000572824 ZNF592Q92610 1267 aa11.13□□□□□ -0.63
NPLOC4-210ENST00000572824 MOV10L1Q9BXT6 1211 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-210ENST00000572824 TANGO6Q9C0B7 1094 aa11.13□□□□□ -0.63
NPLOC4-210ENST00000572824 EPB41L4AQ9HCS5 686 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-210ENST00000572824 OGDHLQ9ULD0 1010 aa11.13□□□□□ -0.63
NPLOC4-210ENST00000572824 USP17L12C9JPN9 530 aa11.12□□□□□ -0.63
NPLOC4-210ENST00000572824 USP17L21D6R901 530 aa11.12□□□□□ -0.63
NPLOC4-210ENST00000572824 M0R2C6 588 aa11.12□□□□□ -0.63
NPLOC4-210ENST00000572824 MAPK4P31152 587 aa11.12□□□□□ -0.63
NPLOC4-210ENST00000572824 RGS2P41220 211 aa11.12□□□□□ -0.63
NPLOC4-210ENST00000572824 CDK8P49336 464 aa11.12□□□□□ -0.63
NPLOC4-210ENST00000572824 PDE3AQ14432 1141 aa11.12□□□□□ -0.63
NPLOC4-210ENST00000572824 GRB14Q14449 540 aa11.12□□□□□ -0.63
NPLOC4-210ENST00000572824 TTF1Q15361 905 aaPredicted RBP11.12□□□□□ -0.63
NPLOC4-210ENST00000572824 HSP90AB4PQ58FF6 505 aa11.12□□□□□ -0.63
NPLOC4-210ENST00000572824 CCDC82Q8N4S0 544 aa11.12□□□□□ -0.63
NPLOC4-210ENST00000572824 SOCS4Q8WXH5 440 aa11.12□□□□□ -0.63
NPLOC4-210ENST00000572824 NUP88Q99567 741 aaPredicted RBP11.12□□□□□ -0.63
NPLOC4-210ENST00000572824 C11orf49Q9H6J7 331 aa11.12□□□□□ -0.63
NPLOC4-210ENST00000572824 GINM1Q9NU53 330 aa11.12□□□□□ -0.63
NPLOC4-210ENST00000572824 RABGAP1Q9Y3P9 1069 aa11.12□□□□□ -0.63
NPLOC4-210ENST00000572824 LCTP09848 1927 aa11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 LAMA2P24043 3122 aaKnown RBP11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 WNT7AO00755 349 aa11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 COBLO75128 1261 aa11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 RAB11FIP3O75154 756 aa11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 HMMRO75330 724 aa11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 ATP2B2Q01814 1243 aa11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 ICA1Q05084 483 aa11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 PRAMEF19Q5SWL8 479 aa11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 ZNF697Q5TEC3 545 aa11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 C12orf60Q5U649 245 aa11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 CTR9Q6PD62 1173 aa11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 LBX2Q6XYB7 198 aa11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 RASGRP2Q7LDG7 609 aa11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 NECAB2Q7Z6G3 386 aa11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 FAM174AQ8TBP5 190 aa11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 OSBP2Q969R2 916 aa11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 LENG1Q96BZ8 264 aaPredicted RBP11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 SEC62Q99442 399 aaKnown RBP11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 CABP5Q9NP86 173 aa11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 SLC4A4Q9Y6R1 1079 aa11.11□□□□□ -0.63
NPLOC4-210ENST00000572824 FLOT1O75955 427 aa11.1□□□□□ -0.63
NPLOC4-210ENST00000572824 IGHA2P01877 340 aa11.1□□□□□ -0.63
NPLOC4-210ENST00000572824 COL6A1P12109 1028 aa11.1□□□□□ -0.63
NPLOC4-210ENST00000572824 XRCC5P13010 732 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-210ENST00000572824 EEF2P13639 858 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-210ENST00000572824 ERCC3P19447 782 aa11.1□□□□□ -0.63
NPLOC4-210ENST00000572824 ADORA2AP29274 412 aa11.1□□□□□ -0.63
NPLOC4-210ENST00000572824 MAGEA10P43363 369 aaPredicted RBP11.1□□□□□ -0.63
NPLOC4-210ENST00000572824 USP14P54578 494 aa11.1□□□□□ -0.63
NPLOC4-210ENST00000572824 PLS1Q14651 629 aa11.1□□□□□ -0.63
NPLOC4-210ENST00000572824 C16orf86Q6ZW13 317 aa11.1□□□□□ -0.63
NPLOC4-210ENST00000572824 Q7L0L9 218 aa11.1□□□□□ -0.63
NPLOC4-210ENST00000572824 CHMP4CQ96CF2 233 aa11.1□□□□□ -0.63
NPLOC4-210ENST00000572824 GDF15Q99988 308 aa11.1□□□□□ -0.63
NPLOC4-210ENST00000572824 LRRCC1Q9C099 1032 aa11.1□□□□□ -0.63
NPLOC4-210ENST00000572824 SPATC1LQ9H0A9 340 aa11.1□□□□□ -0.63
NPLOC4-210ENST00000572824 CWC22Q9HCG8 908 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-210ENST00000572824 NR2E3Q9Y5X4 410 aa11.1□□□□□ -0.63
NPLOC4-210ENST00000572824 LRRC37A2A6NM11 1700 aa11.09□□□□□ -0.63
NPLOC4-210ENST00000572824 SLC15A5A6NIM6 579 aa11.09□□□□□ -0.63
NPLOC4-210ENST00000572824 GSG1L2A8MUP6 293 aa11.09□□□□□ -0.63
NPLOC4-210ENST00000572824 SIAH2O43255 324 aa11.09□□□□□ -0.63
NPLOC4-210ENST00000572824 PRDM1O75626 825 aa11.09□□□□□ -0.63
NPLOC4-210ENST00000572824 PGK2P07205 417 aa11.09□□□□□ -0.63
NPLOC4-210ENST00000572824 CYBAP13498 195 aa11.09□□□□□ -0.63
NPLOC4-210ENST00000572824 TAL1P17542 331 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-210ENST00000572824 TMEM132BQ14DG7 1078 aa11.09□□□□□ -0.63
NPLOC4-210ENST00000572824 UBE3CQ15386 1083 aa11.09□□□□□ -0.63
NPLOC4-210ENST00000572824 TMEM179Q6ZVK1 233 aa11.09□□□□□ -0.63
NPLOC4-210ENST00000572824 CERS3Q8IU89 383 aa11.09□□□□□ -0.63
NPLOC4-210ENST00000572824 CCAR1Q8IX12 1150 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-210ENST00000572824 CCDC97Q96F63 343 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-210ENST00000572824 MRGPRX2Q96LB1 330 aa11.09□□□□□ -0.63
NPLOC4-210ENST00000572824 VCPKMTQ9H867 229 aa11.09□□□□□ -0.63
NPLOC4-210ENST00000572824 TACC3Q9Y6A5 838 aa11.09□□□□□ -0.63
NPLOC4-210ENST00000572824 CDH23Q9H251 3354 aa11.08□□□□□ -0.64
NPLOC4-210ENST00000572824 IGSF3O75054 1194 aa11.08□□□□□ -0.64
NPLOC4-210ENST00000572824 RASA1P20936 1047 aa11.08□□□□□ -0.64
NPLOC4-210ENST00000572824 CNGA1P29973 690 aa11.08□□□□□ -0.64
NPLOC4-210ENST00000572824 FAM83BQ5T0W9 1011 aa11.08□□□□□ -0.64
NPLOC4-210ENST00000572824 GJC2Q5T442 439 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-210ENST00000572824 CCDC129Q6ZRS4 1044 aa11.08□□□□□ -0.64
NPLOC4-210ENST00000572824 REPS2Q8NFH8 660 aa11.08□□□□□ -0.64
NPLOC4-210ENST00000572824 GTF3C2Q8WUA4 911 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-210ENST00000572824 UCN2Q96RP3 112 aa11.08□□□□□ -0.64
NPLOC4-210ENST00000572824 STRBPQ96SI9 672 aaKnown RBP11.08□□□□□ -0.64
NPLOC4-210ENST00000572824 ECHDC1Q9NTX5 307 aa11.08□□□□□ -0.64
NPLOC4-210ENST00000572824 TMX2Q9Y320 296 aa11.08□□□□□ -0.64
NPLOC4-210ENST00000572824 ROBO3Q96MS0 1386 aa11.07□□□□□ -0.64
NPLOC4-210ENST00000572824 RBAK-RBAKDNI3L0D1 243 aa11.07□□□□□ -0.64
NPLOC4-210ENST00000572824 FOXP2O15409 715 aa11.07□□□□□ -0.64
NPLOC4-210ENST00000572824 HOXC6P09630 235 aa11.07□□□□□ -0.64
NPLOC4-210ENST00000572824 COG2Q14746 738 aa11.07□□□□□ -0.64
NPLOC4-210ENST00000572824 FAM47AQ5JRC9 791 aa11.07□□□□□ -0.64
NPLOC4-210ENST00000572824 NCAPG2Q86XI2 1143 aa11.07□□□□□ -0.64
NPLOC4-210ENST00000572824 PI4K2BQ8TCG2 481 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms