RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 WDR63Q8IWG1 891 aa8.91□□□□□ -0.98
CNOT1-222ENST00000570139 TCP11L2Q8N4U5 519 aa8.91□□□□□ -0.98
CNOT1-222ENST00000570139 IP6K1Q92551 441 aa8.91□□□□□ -0.98
CNOT1-222ENST00000570139 KISS1RQ969F8 398 aaPredicted RBP8.91□□□□□ -0.98
CNOT1-222ENST00000570139 C8orf48Q96LL4 319 aa8.91□□□□□ -0.98
CNOT1-222ENST00000570139 PLEKHF1Q96S99 279 aa8.91□□□□□ -0.98
CNOT1-222ENST00000570139 MRPL4Q9BYD3 311 aaKnown RBP8.91□□□□□ -0.98
CNOT1-222ENST00000570139 NSFL1CQ9UNZ2 370 aaKnown RBP8.91□□□□□ -0.98
CNOT1-222ENST00000570139 MRPS23Q9Y3D9 190 aaKnown RBP8.91□□□□□ -0.98
CNOT1-222ENST00000570139 NCAPD2Q15021 1401 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 IL16Q14005 1332 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 ELOA3CA0A087WX78 387 aaPredicted RBP8.9□□□□□ -0.98
CNOT1-222ENST00000570139 ELOA3DA6NLF2 546 aaPredicted RBP8.9□□□□□ -0.98
CNOT1-222ENST00000570139 C2CD2LO14523 706 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 APAF1O14727 1248 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 PRC1O43663 620 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 MAP4K4O95819 1239 aaPredicted RBP8.9□□□□□ -0.98
CNOT1-222ENST00000570139 POU3F3P20264 500 aaPredicted RBP8.9□□□□□ -0.98
CNOT1-222ENST00000570139 MX2P20592 715 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 ALAS2P22557 587 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 PMS1P54277 932 aaKnown RBP8.9□□□□□ -0.98
CNOT1-222ENST00000570139 EPHB1P54762 984 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 TBX4P57082 545 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 MAP7Q14244 749 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 CBX2Q14781 532 aaPredicted RBP8.9□□□□□ -0.98
CNOT1-222ENST00000570139 ELOA3BQ3SY89 546 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 SV2AQ7L0J3 742 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 ARHGEF25Q86VW2 580 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 SCUBE1Q8IWY4 988 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 CCDC146Q8IYE0 955 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 SLFN12Q8IYM2 578 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 ELOA3Q8NG57 546 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 SMARCC1Q92922 1105 aaPredicted RBP8.9□□□□□ -0.98
CNOT1-222ENST00000570139 EXOC2Q96KP1 924 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 MDFIQ99750 246 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 AARSD1Q9BTE6 412 aaKnown RBP8.9□□□□□ -0.98
CNOT1-222ENST00000570139 LMO7Q8WWI1 1683 aa8.9□□□□□ -0.98
CNOT1-222ENST00000570139 COL18A1P39060 1754 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 PHLPP1O60346 1717 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 DNAJC25-GNG10A0A024R161 153 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 TRBV23-1A0A0A0MS06 115 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 A0A1W2PQU0 124 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 GSG1L2A8MUP6 293 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 DCDC2CA8MYV0 355 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 ZNF862O60290 1169 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 TOM1O60784 492 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 SLFN14P0C7P3 912 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 L1CAMP32004 1257 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 EVA1CP58658 441 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 INSM1Q01101 510 aaPredicted RBP8.89□□□□□ -0.99
CNOT1-222ENST00000570139 AKAP4Q5JQC9 854 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 FAM13CQ8NE31 585 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 ATL2Q8NHH9 583 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 APBA2Q99767 749 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 WNT10AQ9GZT5 417 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 ARHGEF4Q9NR80 690 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 PICK1Q9NRD5 415 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 LRP2BPQ9P2M1 347 aa8.89□□□□□ -0.99
CNOT1-222ENST00000570139 THRAP3Q9Y2W1 955 aaKnown RBP8.89□□□□□ -0.99
CNOT1-222ENST00000570139 CHURC1-FNTBB4DL54 471 aa8.88□□□□□ -0.99
CNOT1-222ENST00000570139 FSCN2O14926 492 aa8.88□□□□□ -0.99
CNOT1-222ENST00000570139 ECEL1O95672 775 aa8.88□□□□□ -0.99
CNOT1-222ENST00000570139 PRKAR2BP31323 418 aa8.88□□□□□ -0.99
CNOT1-222ENST00000570139 TMPOP42166 694 aaKnown RBP8.88□□□□□ -0.99
CNOT1-222ENST00000570139 ZC3H12AQ5D1E8 599 aaKnown RBP8.88□□□□□ -0.99
CNOT1-222ENST00000570139 NUTM2GQ5VZR2 741 aa8.88□□□□□ -0.99
CNOT1-222ENST00000570139 PHACTR4Q8IZ21 702 aa8.88□□□□□ -0.99
CNOT1-222ENST00000570139 PPM1KQ8N3J5 372 aa8.88□□□□□ -0.99
CNOT1-222ENST00000570139 KLHL23Q8NBE8 558 aa8.88□□□□□ -0.99
CNOT1-222ENST00000570139 ACSF2Q96CM8 615 aaPredicted RBP8.88□□□□□ -0.99
CNOT1-222ENST00000570139 FAM126AQ9BYI3 521 aaPredicted RBP8.88□□□□□ -0.99
CNOT1-222ENST00000570139 GABBR1Q9UBS5 961 aa8.88□□□□□ -0.99
CNOT1-222ENST00000570139 DLG5Q8TDM6 1919 aa8.88□□□□□ -0.99
CNOT1-222ENST00000570139 COL16A1Q07092 1604 aaPredicted RBP8.87□□□□□ -0.99
CNOT1-222ENST00000570139 COL14A1Q05707 1796 aaKnown RBP8.87□□□□□ -0.99
CNOT1-222ENST00000570139 LOC102724159A0A0B4J2E5 919 aa8.87□□□□□ -0.99
CNOT1-222ENST00000570139 LINC01387J3KSC0 135 aa8.87□□□□□ -0.99
CNOT1-222ENST00000570139 LIG1P18858 919 aa8.87□□□□□ -0.99
CNOT1-222ENST00000570139 FBLN1P23142 703 aa8.87□□□□□ -0.99
CNOT1-222ENST00000570139 MAP2K3P46734 347 aa8.87□□□□□ -0.99
CNOT1-222ENST00000570139 SUMO1P63165 101 aaKnown RBP8.87□□□□□ -0.99
CNOT1-222ENST00000570139 PWP2Q15269 919 aaKnown RBP8.87□□□□□ -0.99
CNOT1-222ENST00000570139 FOXB2Q5VYV0 432 aa8.87□□□□□ -0.99
CNOT1-222ENST00000570139 ERICH6BQ5W0A0 696 aa8.87□□□□□ -0.99
CNOT1-222ENST00000570139 LRRTM3Q86VH5 581 aa8.87□□□□□ -0.99
CNOT1-222ENST00000570139 C12orf40Q86WS4 652 aa8.87□□□□□ -0.99
CNOT1-222ENST00000570139 MCATQ8IVS2 390 aaKnown RBP8.87□□□□□ -0.99
CNOT1-222ENST00000570139 AFAP1L2Q8N4X5 818 aa8.87□□□□□ -0.99
CNOT1-222ENST00000570139 NUDT8Q8WV74 236 aa8.87□□□□□ -0.99
CNOT1-222ENST00000570139 LRRC59Q96AG4 307 aaKnown RBP8.87□□□□□ -0.99
CNOT1-222ENST00000570139 SLC6A18Q96N87 628 aa8.87□□□□□ -0.99
CNOT1-222ENST00000570139 JPH1Q9HDC5 661 aaPredicted RBP8.87□□□□□ -0.99
CNOT1-222ENST00000570139 SUCOQ9UBS9 1254 aaKnown RBP8.87□□□□□ -0.99
CNOT1-222ENST00000570139 SYNGAP1Q96PV0 1343 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 RGS13O14921 159 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 FANCGO15287 622 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 ALDH1L1O75891 902 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 WFS1O76024 890 aa8.86□□□□□ -0.99
CNOT1-222ENST00000570139 CT47B1P0C2W7 299 aaPredicted RBP8.86□□□□□ -0.99
CNOT1-222ENST00000570139 ERVK-24P63145 666 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms