RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 CTAGE5O15320 804 aa17.84■□□□□ 0.45
CMTM3-212ENST00000566121 CLTBP09497 229 aa17.84■□□□□ 0.45
CMTM3-212ENST00000566121 ALAS1P13196 640 aa17.84■□□□□ 0.45
CMTM3-212ENST00000566121 IQCA1Q86XH1 822 aa17.84■□□□□ 0.45
CMTM3-212ENST00000566121 SLC43A3Q8NBI5 491 aa17.84■□□□□ 0.45
CMTM3-212ENST00000566121 FERMT2Q96AC1 680 aa17.84■□□□□ 0.45
CMTM3-212ENST00000566121 TRIM43Q96BQ3 446 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-212ENST00000566121 GLT1D1Q96MS3 346 aa17.84■□□□□ 0.45
CMTM3-212ENST00000566121 YTHDC1Q96MU7 727 aaKnown RBP17.84■□□□□ 0.45
CMTM3-212ENST00000566121 VTA1Q9NP79 307 aa17.84■□□□□ 0.45
CMTM3-212ENST00000566121 STARD7Q9NQZ5 370 aa17.84■□□□□ 0.45
CMTM3-212ENST00000566121 CCPG1Q9ULG6 757 aa17.84■□□□□ 0.45
CMTM3-212ENST00000566121 RBM47A0AV96 593 aaKnown RBP17.83■□□□□ 0.44
CMTM3-212ENST00000566121 RRP12Q5JTH9 1297 aaKnown RBP17.83■□□□□ 0.44
CMTM3-212ENST00000566121 CWC27Q6UX04 472 aaKnown RBP17.83■□□□□ 0.44
CMTM3-212ENST00000566121 TBC1D10CQ8IV04 446 aa17.83■□□□□ 0.44
CMTM3-212ENST00000566121 CNNM2Q9H8M5 875 aa17.83■□□□□ 0.44
CMTM3-212ENST00000566121 TOMM22Q9NS69 142 aa17.83■□□□□ 0.44
CMTM3-212ENST00000566121 HOMER2Q9NSB8 354 aa17.83■□□□□ 0.44
CMTM3-212ENST00000566121 ASTN1O14525 1302 aa17.82■□□□□ 0.44
CMTM3-212ENST00000566121 RAD50Q92878 1312 aa17.82■□□□□ 0.44
CMTM3-212ENST00000566121 DCDC2CA8MYV0 355 aa17.82■□□□□ 0.44
CMTM3-212ENST00000566121 ASGR1P07306 291 aa17.82■□□□□ 0.44
CMTM3-212ENST00000566121 SLC4A3P48751 1232 aa17.82■□□□□ 0.44
CMTM3-212ENST00000566121 HAND2P61296 217 aa17.82■□□□□ 0.44
CMTM3-212ENST00000566121 TNFAIP2Q03169 654 aa17.82■□□□□ 0.44
CMTM3-212ENST00000566121 FAAP100Q0VG06 881 aa17.82■□□□□ 0.44
CMTM3-212ENST00000566121 IMMTQ16891 758 aaKnown RBP17.82■□□□□ 0.44
CMTM3-212ENST00000566121 CCDC96Q2M329 555 aa17.82■□□□□ 0.44
CMTM3-212ENST00000566121 MUM1L1Q5H9M0 696 aa17.82■□□□□ 0.44
CMTM3-212ENST00000566121 TTBK2Q6IQ55 1244 aa17.82■□□□□ 0.44
CMTM3-212ENST00000566121 TAPT1Q6NXT6 567 aa17.82■□□□□ 0.44
CMTM3-212ENST00000566121 DNERQ8NFT8 737 aa17.82■□□□□ 0.44
CMTM3-212ENST00000566121 KRT23Q9C075 422 aa17.82■□□□□ 0.44
CMTM3-212ENST00000566121 LTBP2Q14767 1821 aa17.82■□□□□ 0.44
CMTM3-212ENST00000566121 CUL9Q8IWT3 2517 aa17.81■□□□□ 0.44
CMTM3-212ENST00000566121 A0A0U1RQG5 324 aaPredicted RBP17.81■□□□□ 0.44
CMTM3-212ENST00000566121 ARVCFO00192 962 aa17.81■□□□□ 0.44
CMTM3-212ENST00000566121 ADCY6O43306 1168 aa17.81■□□□□ 0.44
CMTM3-212ENST00000566121 GNASQ5JWF2 1037 aa17.81■□□□□ 0.44
CMTM3-212ENST00000566121 CCDC174Q6PII3 467 aa17.81■□□□□ 0.44
CMTM3-212ENST00000566121 CLEC4DQ8WXI8 215 aa17.81■□□□□ 0.44
CMTM3-212ENST00000566121 BADQ92934 168 aa17.81■□□□□ 0.44
CMTM3-212ENST00000566121 MTMR10Q9NXD2 777 aa17.81■□□□□ 0.44
CMTM3-212ENST00000566121 TBX21Q9UL17 535 aa17.81■□□□□ 0.44
CMTM3-212ENST00000566121 MYCNP04198 464 aaPredicted RBP17.8■□□□□ 0.44
CMTM3-212ENST00000566121 C6orf222P0C671 652 aaPredicted RBP17.8■□□□□ 0.44
CMTM3-212ENST00000566121 EDNRBP24530 442 aa17.8■□□□□ 0.44
CMTM3-212ENST00000566121 SLC16A2P36021 539 aa17.8■□□□□ 0.44
CMTM3-212ENST00000566121 SMAD3P84022 425 aaKnown RBP17.8■□□□□ 0.44
CMTM3-212ENST00000566121 SH3RF1Q7Z6J0 888 aa17.8■□□□□ 0.44
CMTM3-212ENST00000566121 DEFB123Q8N688 67 aa17.8■□□□□ 0.44
CMTM3-212ENST00000566121 ZSCAN10Q96SZ4 725 aaPredicted RBP17.8■□□□□ 0.44
CMTM3-212ENST00000566121 ZSWIM5Q9P217 1185 aa17.8■□□□□ 0.44
CMTM3-212ENST00000566121 ISY1Q9ULR0 285 aaKnown RBP17.8■□□□□ 0.44
CMTM3-212ENST00000566121 STXBP5LQ9Y2K9 1186 aa17.8■□□□□ 0.44
CMTM3-212ENST00000566121 SUPT16HQ9Y5B9 1047 aaKnown RBP17.8■□□□□ 0.44
CMTM3-212ENST00000566121 MCM3APO60318 1980 aa17.8■□□□□ 0.44
CMTM3-212ENST00000566121 NEDD4P46934 1319 aa17.79■□□□□ 0.44
CMTM3-212ENST00000566121 B4DLN1 442 aa17.79■□□□□ 0.44
CMTM3-212ENST00000566121 ZEB2O60315 1214 aa17.79■□□□□ 0.44
CMTM3-212ENST00000566121 TIMP1P01033 207 aa17.79■□□□□ 0.44
CMTM3-212ENST00000566121 MRPL12P52815 198 aaKnown RBP17.79■□□□□ 0.44
CMTM3-212ENST00000566121 BAATQ14032 418 aaPredicted RBP17.79■□□□□ 0.44
CMTM3-212ENST00000566121 DUSP28Q4G0W2 176 aa17.79■□□□□ 0.44
CMTM3-212ENST00000566121 ASPRV1Q53RT3 343 aa17.79■□□□□ 0.44
CMTM3-212ENST00000566121 TTC22Q5TAA0 569 aa17.79■□□□□ 0.44
CMTM3-212ENST00000566121 PNMA1Q8ND90 353 aa17.79■□□□□ 0.44
CMTM3-212ENST00000566121 LENG1Q96BZ8 264 aaPredicted RBP17.79■□□□□ 0.44
CMTM3-212ENST00000566121 MPHOSPH6Q99547 160 aaKnown RBP17.79■□□□□ 0.44
CMTM3-212ENST00000566121 TMEM39AQ9NV64 488 aa17.79■□□□□ 0.44
CMTM3-212ENST00000566121 TMEM265A0A087WTH1 108 aa17.78■□□□□ 0.44
CMTM3-212ENST00000566121 MYADML2A6NDP7 307 aa17.78■□□□□ 0.44
CMTM3-212ENST00000566121 NKRFO15226 690 aaKnown RBP eCLIP17.78■□□□□ 0.441e-6■■■■□ 25.7
CMTM3-212ENST00000566121 KDM4AO75164 1064 aa17.78■□□□□ 0.44
CMTM3-212ENST00000566121 CD4P01730 458 aa17.78■□□□□ 0.44
CMTM3-212ENST00000566121 RAG1P15918 1043 aa17.78■□□□□ 0.44
CMTM3-212ENST00000566121 SMPD1P17405 629 aa17.78■□□□□ 0.44
CMTM3-212ENST00000566121 ITGB8P26012 769 aa17.78■□□□□ 0.44
CMTM3-212ENST00000566121 PDE4AP27815 886 aa17.78■□□□□ 0.44
CMTM3-212ENST00000566121 SHHQ15465 462 aa17.78■□□□□ 0.44
CMTM3-212ENST00000566121 NSMFQ6X4W1 530 aa17.78■□□□□ 0.44
CMTM3-212ENST00000566121 RASGRP2Q7LDG7 609 aa17.78■□□□□ 0.44
CMTM3-212ENST00000566121 RUFY2Q8WXA3 655 aa17.78■□□□□ 0.44
CMTM3-212ENST00000566121 AP5M1Q9H0R1 490 aa17.78■□□□□ 0.44
CMTM3-212ENST00000566121 GPCPD1Q9NPB8 672 aa17.78■□□□□ 0.44
CMTM3-212ENST00000566121 PRDM5Q9NQX1 630 aaPredicted RBP17.78■□□□□ 0.44
CMTM3-212ENST00000566121 NFIBO00712 420 aa17.77■□□□□ 0.44
CMTM3-212ENST00000566121 PQBP1O60828 265 aaKnown RBP17.77■□□□□ 0.44
CMTM3-212ENST00000566121 ALDH5A1P51649 535 aaPredicted RBP17.77■□□□□ 0.44
CMTM3-212ENST00000566121 SNAP25P60880 206 aa17.77■□□□□ 0.44
CMTM3-212ENST00000566121 GHRHRQ02643 423 aa17.77■□□□□ 0.44
CMTM3-212ENST00000566121 FSCN1Q16658 493 aaKnown RBP17.77■□□□□ 0.44
CMTM3-212ENST00000566121 MFSD5Q6N075 450 aa17.77■□□□□ 0.44
CMTM3-212ENST00000566121 FAM126BQ8IXS8 530 aa17.77■□□□□ 0.44
CMTM3-212ENST00000566121 SAMD3Q8N6K7 520 aa17.77■□□□□ 0.44
CMTM3-212ENST00000566121 ENAHQ8N8S7 591 aaPredicted RBP17.77■□□□□ 0.44
CMTM3-212ENST00000566121 KAT14Q9H8E8 782 aa17.77■□□□□ 0.44
CMTM3-212ENST00000566121 MAP3K20Q9NYL2 800 aaKnown RBP17.77■□□□□ 0.44
CMTM3-212ENST00000566121 LAMA4Q16363 1823 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms