RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 CST5P28325 142 aaPredicted RBP20.51■□□□□ 0.87
MAP1LC3B-207ENST00000565788 BADQ92934 168 aa20.51■□□□□ 0.87
MAP1LC3B-207ENST00000565788 TTC14Q96N46 770 aa20.51■□□□□ 0.87
MAP1LC3B-207ENST00000565788 ZKSCAN3Q9BRR0 538 aa20.51■□□□□ 0.87
MAP1LC3B-207ENST00000565788 UPF3AQ9H1J1 476 aaKnown RBP20.51■□□□□ 0.87
MAP1LC3B-207ENST00000565788 STARD7Q9NQZ5 370 aa20.51■□□□□ 0.87
MAP1LC3B-207ENST00000565788 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.5■□□□□ 0.87
MAP1LC3B-207ENST00000565788 ASB14A6NK59 587 aa20.5■□□□□ 0.87
MAP1LC3B-207ENST00000565788 HIP1O00291 1037 aa20.5■□□□□ 0.87
MAP1LC3B-207ENST00000565788 PQBP1O60828 265 aaKnown RBP20.5■□□□□ 0.87
MAP1LC3B-207ENST00000565788 CLTBP09497 229 aa20.5■□□□□ 0.87
MAP1LC3B-207ENST00000565788 PDE4AP27815 886 aa20.5■□□□□ 0.87
MAP1LC3B-207ENST00000565788 GJA9P57773 515 aa20.5■□□□□ 0.87
MAP1LC3B-207ENST00000565788 NSMFQ6X4W1 530 aa20.5■□□□□ 0.87
MAP1LC3B-207ENST00000565788 Q7L0L9 218 aa20.5■□□□□ 0.87
MAP1LC3B-207ENST00000565788 ESR2Q92731 530 aa20.5■□□□□ 0.87
MAP1LC3B-207ENST00000565788 SNHG28P0DPA3 235 aa20.49■□□□□ 0.87
MAP1LC3B-207ENST00000565788 ITGB8P26012 769 aa20.49■□□□□ 0.87
MAP1LC3B-207ENST00000565788 ZNF543Q08ER8 600 aa20.49■□□□□ 0.87
MAP1LC3B-207ENST00000565788 NUP133Q8WUM0 1156 aa20.49■□□□□ 0.87
MAP1LC3B-207ENST00000565788 PURBQ96QR8 312 aaKnown RBP20.49■□□□□ 0.87
MAP1LC3B-207ENST00000565788 SPC25Q9HBM1 224 aa20.49■□□□□ 0.87
MAP1LC3B-207ENST00000565788 NFIBO00712 420 aa20.48■□□□□ 0.87
MAP1LC3B-207ENST00000565788 CTAGE5O15320 804 aa20.48■□□□□ 0.87
MAP1LC3B-207ENST00000565788 ASGR1P07306 291 aa20.48■□□□□ 0.87
MAP1LC3B-207ENST00000565788 C9orf50Q5SZB4 431 aa20.48■□□□□ 0.87
MAP1LC3B-207ENST00000565788 DEFB123Q8N688 67 aa20.48■□□□□ 0.87
MAP1LC3B-207ENST00000565788 DSCC1Q9BVC3 393 aa20.48■□□□□ 0.87
MAP1LC3B-207ENST00000565788 IL25Q9H293 177 aa20.48■□□□□ 0.87
MAP1LC3B-207ENST00000565788 KDM4AO75164 1064 aa20.47■□□□□ 0.87
MAP1LC3B-207ENST00000565788 GSPT1P15170 499 aaKnown RBP20.47■□□□□ 0.87
MAP1LC3B-207ENST00000565788 PTGS1P23219 599 aa20.47■□□□□ 0.87
MAP1LC3B-207ENST00000565788 IRX6P78412 446 aaPredicted RBP20.47■□□□□ 0.87
MAP1LC3B-207ENST00000565788 TNFAIP2Q03169 654 aa20.47■□□□□ 0.87
MAP1LC3B-207ENST00000565788 BAATQ14032 418 aaPredicted RBP20.47■□□□□ 0.87
MAP1LC3B-207ENST00000565788 SHHQ15465 462 aa20.47■□□□□ 0.87
MAP1LC3B-207ENST00000565788 EEPD1Q7L9B9 569 aa20.47■□□□□ 0.87
MAP1LC3B-207ENST00000565788 ANKRD33Q7Z3H0 272 aa20.47■□□□□ 0.87
MAP1LC3B-207ENST00000565788 FBXO16Q8IX29 292 aaPredicted RBP20.47■□□□□ 0.87
MAP1LC3B-207ENST00000565788 PCSK9Q8NBP7 692 aaKnown RBP20.47■□□□□ 0.87
MAP1LC3B-207ENST00000565788 GLT1D1Q96MS3 346 aa20.47■□□□□ 0.87
MAP1LC3B-207ENST00000565788 B4E1Z4 1266 aa20.46■□□□□ 0.87
MAP1LC3B-207ENST00000565788 KIAA0355O15063 1070 aa20.46■□□□□ 0.87
MAP1LC3B-207ENST00000565788 BEX3Q00994 111 aa20.46■□□□□ 0.87
MAP1LC3B-207ENST00000565788 FAAP100Q0VG06 881 aa20.46■□□□□ 0.87
MAP1LC3B-207ENST00000565788 GNASQ5JWF2 1037 aa20.46■□□□□ 0.87
MAP1LC3B-207ENST00000565788 DGKHQ86XP1 1220 aa20.46■□□□□ 0.87
MAP1LC3B-207ENST00000565788 CLEC4DQ8WXI8 215 aa20.46■□□□□ 0.87
MAP1LC3B-207ENST00000565788 TOX2Q96NM4 488 aa20.46■□□□□ 0.87
MAP1LC3B-207ENST00000565788 PDGFCQ9NRA1 345 aa20.46■□□□□ 0.87
MAP1LC3B-207ENST00000565788 TMEM39AQ9NV64 488 aa20.46■□□□□ 0.87
MAP1LC3B-207ENST00000565788 GNEQ9Y223 722 aaKnown RBP20.46■□□□□ 0.87
MAP1LC3B-207ENST00000565788 GOLGA8HP0CJ92 632 aa20.45■□□□□ 0.86
MAP1LC3B-207ENST00000565788 NT5C2P49902 561 aa20.45■□□□□ 0.86
MAP1LC3B-207ENST00000565788 NKX3-2P78367 333 aa20.45■□□□□ 0.86
MAP1LC3B-207ENST00000565788 IMMTQ16891 758 aaKnown RBP20.45■□□□□ 0.86
MAP1LC3B-207ENST00000565788 TTC22Q5TAA0 569 aa20.45■□□□□ 0.86
MAP1LC3B-207ENST00000565788 TAPT1Q6NXT6 567 aa20.45■□□□□ 0.86
MAP1LC3B-207ENST00000565788 SLC30A10Q6XR72 485 aa20.45■□□□□ 0.86
MAP1LC3B-207ENST00000565788 NOL8Q76FK4 1167 aaKnown RBP20.45■□□□□ 0.86
MAP1LC3B-207ENST00000565788 TLK2Q86UE8 772 aa20.45■□□□□ 0.86
MAP1LC3B-207ENST00000565788 IQCA1Q86XH1 822 aa20.45■□□□□ 0.86
MAP1LC3B-207ENST00000565788 MORC4Q8TE76 937 aa20.45■□□□□ 0.86
MAP1LC3B-207ENST00000565788 CPVLQ9H3G5 476 aa20.45■□□□□ 0.86
MAP1LC3B-207ENST00000565788 ELP1O95163 1332 aa20.45■□□□□ 0.86
MAP1LC3B-207ENST00000565788 PTPDC1A2A3K4 754 aa20.44■□□□□ 0.86
MAP1LC3B-207ENST00000565788 DCDC2CA8MYV0 355 aa20.44■□□□□ 0.86
MAP1LC3B-207ENST00000565788 RAG1P15918 1043 aa20.44■□□□□ 0.86
MAP1LC3B-207ENST00000565788 SMPD1P17405 629 aa20.44■□□□□ 0.86
MAP1LC3B-207ENST00000565788 ALDH5A1P51649 535 aaPredicted RBP20.44■□□□□ 0.86
MAP1LC3B-207ENST00000565788 CCDC178Q5BJE1 867 aa20.44■□□□□ 0.86
MAP1LC3B-207ENST00000565788 TMEM63BQ5T3F8 832 aa20.44■□□□□ 0.86
MAP1LC3B-207ENST00000565788 GPATCH4Q5T3I0 446 aaKnown RBP20.44■□□□□ 0.86
MAP1LC3B-207ENST00000565788 PNMA1Q8ND90 353 aa20.44■□□□□ 0.86
MAP1LC3B-207ENST00000565788 VTI1AQ96AJ9 217 aa20.44■□□□□ 0.86
MAP1LC3B-207ENST00000565788 MTMR10Q9NXD2 777 aa20.44■□□□□ 0.86
MAP1LC3B-207ENST00000565788 CTNNA3Q9UI47 895 aa20.44■□□□□ 0.86
MAP1LC3B-207ENST00000565788 WDR19Q8NEZ3 1342 aa20.44■□□□□ 0.86
MAP1LC3B-207ENST00000565788 A0A0U1RQG5 324 aaPredicted RBP20.43■□□□□ 0.86
MAP1LC3B-207ENST00000565788 CDK7P50613 346 aa20.43■□□□□ 0.86
MAP1LC3B-207ENST00000565788 ENAHQ8N8S7 591 aaPredicted RBP20.43■□□□□ 0.86
MAP1LC3B-207ENST00000565788 ANKS1AQ92625 1134 aa20.43■□□□□ 0.86
MAP1LC3B-207ENST00000565788 ZSCAN10Q96SZ4 725 aaPredicted RBP20.43■□□□□ 0.86
MAP1LC3B-207ENST00000565788 UBA5Q9GZZ9 404 aa20.43■□□□□ 0.86
MAP1LC3B-207ENST00000565788 KAT14Q9H8E8 782 aa20.43■□□□□ 0.86
MAP1LC3B-207ENST00000565788 VTA1Q9NP79 307 aa20.43■□□□□ 0.86
MAP1LC3B-207ENST00000565788 ZSWIM5Q9P217 1185 aa20.43■□□□□ 0.86
MAP1LC3B-207ENST00000565788 ADD3Q9UEY8 706 aaKnown RBP20.43■□□□□ 0.86
MAP1LC3B-207ENST00000565788 ARVCFO00192 962 aa20.42■□□□□ 0.86
MAP1LC3B-207ENST00000565788 DYNC1LI2O43237 492 aaPredicted RBP20.42■□□□□ 0.86
MAP1LC3B-207ENST00000565788 CALML3P27482 149 aa20.42■□□□□ 0.86
MAP1LC3B-207ENST00000565788 EPHB4P54760 987 aa20.42■□□□□ 0.86
MAP1LC3B-207ENST00000565788 IQSEC1Q6DN90 963 aa20.42■□□□□ 0.86
MAP1LC3B-207ENST00000565788 RNF207Q6ZRF8 634 aa20.42■□□□□ 0.86
MAP1LC3B-207ENST00000565788 TBX21Q9UL17 535 aa20.42■□□□□ 0.86
MAP1LC3B-207ENST00000565788 PNMA2Q9UL42 364 aa20.42■□□□□ 0.86
MAP1LC3B-207ENST00000565788 TNKSO95271 1327 aa20.42■□□□□ 0.86
MAP1LC3B-207ENST00000565788 MROH7Q68CQ1 1323 aa20.42■□□□□ 0.86
MAP1LC3B-207ENST00000565788 COL6A3P12111 3177 aa20.41■□□□□ 0.86
MAP1LC3B-207ENST00000565788 RPS6P62753 249 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms