RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 CCDC144CPQ8IYA2 1237 aa18.38■□□□□ 0.53
USB1-208ENST00000563207 FAM133AQ8N9E0 248 aa18.38■□□□□ 0.53
USB1-208ENST00000563207 CHST13Q8NET6 341 aa18.38■□□□□ 0.53
USB1-208ENST00000563207 CHURC1Q8WUH1 139 aa18.38■□□□□ 0.53
USB1-208ENST00000563207 LBHD1Q9BQE6 289 aaPredicted RBP18.38■□□□□ 0.53
USB1-208ENST00000563207 TMEM47Q9BQJ4 181 aa18.38■□□□□ 0.53
USB1-208ENST00000563207 KRT23Q9C075 422 aa18.38■□□□□ 0.53
USB1-208ENST00000563207 KATNBL1Q9H079 304 aa18.38■□□□□ 0.53
USB1-208ENST00000563207 FRMPD2Q68DX3 1309 aaPredicted RBP18.38■□□□□ 0.53
USB1-208ENST00000563207 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.37■□□□□ 0.53
USB1-208ENST00000563207 CYP21A2P08686 494 aa18.37■□□□□ 0.53
USB1-208ENST00000563207 TRDNQ13061 729 aa18.37■□□□□ 0.53
USB1-208ENST00000563207 SHHQ15465 462 aa18.37■□□□□ 0.53
USB1-208ENST00000563207 CCDC96Q2M329 555 aa18.37■□□□□ 0.53
USB1-208ENST00000563207 CCDC144BQ3MJ40 725 aa18.37■□□□□ 0.53
USB1-208ENST00000563207 ZNF467Q7Z7K2 595 aaPredicted RBP18.37■□□□□ 0.53
USB1-208ENST00000563207 RNF180Q86T96 592 aa18.37■□□□□ 0.53
USB1-208ENST00000563207 FAM160B2Q86V87 743 aa18.37■□□□□ 0.53
USB1-208ENST00000563207 DEFB123Q8N688 67 aa18.37■□□□□ 0.53
USB1-208ENST00000563207 KLHDC9Q8NEP7 349 aa18.37■□□□□ 0.53
USB1-208ENST00000563207 ESR2Q92731 530 aa18.37■□□□□ 0.53
USB1-208ENST00000563207 TRERF1Q96PN7 1200 aa18.37■□□□□ 0.53
USB1-208ENST00000563207 ACAD9Q9H845 621 aa18.37■□□□□ 0.53
USB1-208ENST00000563207 GPCPD1Q9NPB8 672 aa18.37■□□□□ 0.53
USB1-208ENST00000563207 FAM184BQ9ULE4 1060 aa18.37■□□□□ 0.53
USB1-208ENST00000563207 LRRC37A2A6NM11 1700 aa18.36■□□□□ 0.53
USB1-208ENST00000563207 NEDD4P46934 1319 aa18.36■□□□□ 0.53
USB1-208ENST00000563207 ACLYP53396 1101 aa18.36■□□□□ 0.53
USB1-208ENST00000563207 KCNA10Q16322 511 aa18.36■□□□□ 0.53
USB1-208ENST00000563207 MSL3Q8N5Y2 521 aaKnown RBP18.36■□□□□ 0.53
USB1-208ENST00000563207 ZKSCAN3Q9BRR0 538 aa18.36■□□□□ 0.53
USB1-208ENST00000563207 PRKAG2Q9UGJ0 569 aa18.36■□□□□ 0.53
USB1-208ENST00000563207 FBXO40Q9UH90 709 aa18.36■□□□□ 0.53
USB1-208ENST00000563207 CTAGE5O15320 804 aa18.35■□□□□ 0.53
USB1-208ENST00000563207 PLA2G6O60733 806 aa18.35■□□□□ 0.53
USB1-208ENST00000563207 PQBP1O60828 265 aaKnown RBP18.35■□□□□ 0.53
USB1-208ENST00000563207 EPHB4P54760 987 aa18.35■□□□□ 0.53
USB1-208ENST00000563207 TSGA10IPQ3SY00 556 aa18.35■□□□□ 0.53
USB1-208ENST00000563207 CCDC178Q5BJE1 867 aa18.35■□□□□ 0.53
USB1-208ENST00000563207 C1orf53Q5VUE5 145 aa18.35■□□□□ 0.53
USB1-208ENST00000563207 CREB3L3Q68CJ9 461 aa18.35■□□□□ 0.53
USB1-208ENST00000563207 TCP11L1Q9NUJ3 509 aa18.35■□□□□ 0.53
USB1-208ENST00000563207 POTEB2H3BUK9 544 aa18.34■□□□□ 0.53
USB1-208ENST00000563207 SLC27A2O14975 620 aa18.34■□□□□ 0.53
USB1-208ENST00000563207 DUSP11O75319 330 aaKnown RBP18.34■□□□□ 0.53
USB1-208ENST00000563207 EEPD1Q7L9B9 569 aa18.34■□□□□ 0.53
USB1-208ENST00000563207 CPVLQ9H3G5 476 aa18.34■□□□□ 0.53
USB1-208ENST00000563207 ABHD16BQ9H3Z7 469 aa18.34■□□□□ 0.53
USB1-208ENST00000563207 PDGFCQ9NRA1 345 aa18.34■□□□□ 0.53
USB1-208ENST00000563207 E7EWF7 191 aa18.33■□□□□ 0.52
USB1-208ENST00000563207 C6orf222P0C671 652 aaPredicted RBP18.33■□□□□ 0.52
USB1-208ENST00000563207 FDX1P10109 184 aa18.33■□□□□ 0.52
USB1-208ENST00000563207 TOP1P11387 765 aaKnown RBP18.33■□□□□ 0.52
USB1-208ENST00000563207 BEX3Q00994 111 aa18.33■□□□□ 0.52
USB1-208ENST00000563207 FAAP100Q0VG06 881 aa18.33■□□□□ 0.52
USB1-208ENST00000563207 KRT32Q14532 448 aa18.33■□□□□ 0.52
USB1-208ENST00000563207 NSMFQ6X4W1 530 aa18.33■□□□□ 0.52
USB1-208ENST00000563207 IQCA1Q86XH1 822 aa18.33■□□□□ 0.52
USB1-208ENST00000563207 NCOA7Q8NI08 942 aa18.33■□□□□ 0.52
USB1-208ENST00000563207 DCAF4Q8WV16 495 aa18.33■□□□□ 0.52
USB1-208ENST00000563207 MTMR10Q9NXD2 777 aa18.33■□□□□ 0.52
USB1-208ENST00000563207 CYP39A1Q9NYL5 469 aa18.33■□□□□ 0.52
USB1-208ENST00000563207 CCPG1Q9ULG6 757 aa18.33■□□□□ 0.52
USB1-208ENST00000563207 NFIBO00712 420 aa18.32■□□□□ 0.52
USB1-208ENST00000563207 ASGR1P07306 291 aa18.32■□□□□ 0.52
USB1-208ENST00000563207 CLTBP09497 229 aa18.32■□□□□ 0.52
USB1-208ENST00000563207 PDHBP11177 359 aa18.32■□□□□ 0.52
USB1-208ENST00000563207 HSPA4P34932 840 aa18.32■□□□□ 0.52
USB1-208ENST00000563207 BTNL9Q6UXG8 535 aa18.32■□□□□ 0.52
USB1-208ENST00000563207 RALYLQ86SE5 291 aaKnown RBP18.32■□□□□ 0.52
USB1-208ENST00000563207 KCNB2Q92953 911 aa18.32■□□□□ 0.52
USB1-208ENST00000563207 FAM161BQ96MY7 647 aa18.32■□□□□ 0.52
USB1-208ENST00000563207 TTC14Q96N46 770 aa18.32■□□□□ 0.52
USB1-208ENST00000563207 TSEN34Q9BSV6 310 aaKnown RBP18.32■□□□□ 0.52
USB1-208ENST00000563207 USP26Q9BXU7 913 aa18.32■□□□□ 0.52
USB1-208ENST00000563207 RANBP17Q9H2T7 1088 aaKnown RBP18.32■□□□□ 0.52
USB1-208ENST00000563207 STARD7Q9NQZ5 370 aa18.32■□□□□ 0.52
USB1-208ENST00000563207 EYSQ5T1H1 3165 aa18.32■□□□□ 0.52
USB1-208ENST00000563207 B4E1Z4 1266 aa18.31■□□□□ 0.52
USB1-208ENST00000563207 KDM4AO75164 1064 aa18.31■□□□□ 0.52
USB1-208ENST00000563207 ICAM1P05362 532 aa18.31■□□□□ 0.52
USB1-208ENST00000563207 GOLGA8HP0CJ92 632 aa18.31■□□□□ 0.52
USB1-208ENST00000563207 GJA9P57773 515 aa18.31■□□□□ 0.52
USB1-208ENST00000563207 SYDE2Q5VT97 1194 aa18.31■□□□□ 0.52
USB1-208ENST00000563207 MTA3Q9BTC8 594 aa18.31■□□□□ 0.52
USB1-208ENST00000563207 UPF3AQ9H1J1 476 aaKnown RBP18.31■□□□□ 0.52
USB1-208ENST00000563207 ZSWIM5Q9P217 1185 aa18.31■□□□□ 0.52
USB1-208ENST00000563207 SMPD1P17405 629 aa18.3■□□□□ 0.52
USB1-208ENST00000563207 BAATQ14032 418 aaPredicted RBP18.3■□□□□ 0.52
USB1-208ENST00000563207 TKFCQ3LXA3 575 aa18.3■□□□□ 0.52
USB1-208ENST00000563207 C8orf34Q49A92 452 aa18.3■□□□□ 0.52
USB1-208ENST00000563207 GNASQ5JWF2 1037 aa18.3■□□□□ 0.52
USB1-208ENST00000563207 GPR153Q6NV75 609 aa18.3■□□□□ 0.52
USB1-208ENST00000563207 TAPT1Q6NXT6 567 aa18.3■□□□□ 0.52
USB1-208ENST00000563207 DGKHQ86XP1 1220 aa18.3■□□□□ 0.52
USB1-208ENST00000563207 FBXO16Q8IX29 292 aaPredicted RBP18.3■□□□□ 0.52
USB1-208ENST00000563207 CLEC4DQ8WXI8 215 aa18.3■□□□□ 0.52
USB1-208ENST00000563207 TMEM39AQ9NV64 488 aa18.3■□□□□ 0.52
USB1-208ENST00000563207 KIAA0355O15063 1070 aa18.29■□□□□ 0.52
USB1-208ENST00000563207 CST5P28325 142 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms