RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 PAQR3Q6TCH7 311 aa6.03□□□□□ -1.44
LRRC28-218ENST00000560236 CYP2R1Q6VVX0 501 aa6.03□□□□□ -1.44
LRRC28-218ENST00000560236 FRMD5Q7Z6J6 570 aa6.03□□□□□ -1.44
LRRC28-218ENST00000560236 TP53I13Q8NBR0 393 aaPredicted RBP6.03□□□□□ -1.44
LRRC28-218ENST00000560236 SMARCC1Q92922 1105 aaPredicted RBP6.03□□□□□ -1.44
LRRC28-218ENST00000560236 ZNRF3Q9ULT6 936 aa6.03□□□□□ -1.44
LRRC28-218ENST00000560236 DCAF1Q9Y4B6 1507 aa6.03□□□□□ -1.44
LRRC28-218ENST00000560236 SCRIBQ14160 1630 aa6.03□□□□□ -1.44
LRRC28-218ENST00000560236 CYBBP04839 570 aa6.02□□□□□ -1.45
LRRC28-218ENST00000560236 DBHP09172 617 aa6.02□□□□□ -1.45
LRRC28-218ENST00000560236 NOP2P46087 812 aaKnown RBP6.02□□□□□ -1.45
LRRC28-218ENST00000560236 ZNF445P59923 1031 aa6.02□□□□□ -1.45
LRRC28-218ENST00000560236 ANKRD39Q53RE8 183 aa6.02□□□□□ -1.45
LRRC28-218ENST00000560236 DCAF15Q66K64 600 aa6.02□□□□□ -1.45
LRRC28-218ENST00000560236 BRF1Q92994 677 aa6.02□□□□□ -1.45
LRRC28-218ENST00000560236 FERD3LQ96RJ6 166 aa6.02□□□□□ -1.45
LRRC28-218ENST00000560236 SRRTQ9BXP5 876 aaKnown RBP6.02□□□□□ -1.45
LRRC28-218ENST00000560236 GP6Q9HCN6 339 aa6.02□□□□□ -1.45
LRRC28-218ENST00000560236 PDLIM7Q9NR12 457 aa6.02□□□□□ -1.45
LRRC28-218ENST00000560236 FGF10O15520 208 aaPredicted RBP6.01□□□□□ -1.45
LRRC28-218ENST00000560236 SRGAP3O43295 1099 aa6.01□□□□□ -1.45
LRRC28-218ENST00000560236 KCNC1P48547 511 aa6.01□□□□□ -1.45
LRRC28-218ENST00000560236 CAP1Q01518 475 aa6.01□□□□□ -1.45
LRRC28-218ENST00000560236 AXDND1Q5T1B0 1012 aaPredicted RBP6.01□□□□□ -1.45
LRRC28-218ENST00000560236 PPFIBP1Q86W92 1011 aa6.01□□□□□ -1.45
LRRC28-218ENST00000560236 TAB3Q8N5C8 712 aaPredicted RBP6.01□□□□□ -1.45
LRRC28-218ENST00000560236 RGS22Q8NE09 1264 aa6.01□□□□□ -1.45
LRRC28-218ENST00000560236 TM9SF2Q99805 663 aa6.01□□□□□ -1.45
LRRC28-218ENST00000560236 SF3B6Q9Y3B4 125 aaKnown RBP6.01□□□□□ -1.45
LRRC28-218ENST00000560236 FHOD1Q9Y613 1164 aa6.01□□□□□ -1.45
LRRC28-218ENST00000560236 TP53P04637 393 aaPredicted RBP6□□□□□ -1.45
LRRC28-218ENST00000560236 SLURP1P55000 103 aa6□□□□□ -1.45
LRRC28-218ENST00000560236 KRTAP10-2P60368 255 aa6□□□□□ -1.45
LRRC28-218ENST00000560236 FBXW10Q5XX13 1052 aa6□□□□□ -1.45
LRRC28-218ENST00000560236 FIBCD1Q8N539 461 aa6□□□□□ -1.45
LRRC28-218ENST00000560236 TMEM87AQ8NBN3 555 aa6□□□□□ -1.45
LRRC28-218ENST00000560236 FAM86C1Q9NVL1 165 aa6□□□□□ -1.45
LRRC28-218ENST00000560236 SUSD2Q9UGT4 822 aa6□□□□□ -1.45
LRRC28-218ENST00000560236 DBR1Q9UK59 544 aaKnown RBP6□□□□□ -1.45
LRRC28-218ENST00000560236 HCFC2Q9Y5Z7 792 aa6□□□□□ -1.45
LRRC28-218ENST00000560236 THOC2Q8NI27 1593 aaKnown RBP5.99□□□□□ -1.45
LRRC28-218ENST00000560236 F8W031 263 aaPredicted RBP5.99□□□□□ -1.45
LRRC28-218ENST00000560236 TBC1D8O95759 1140 aa5.99□□□□□ -1.45
LRRC28-218ENST00000560236 CD247P20963 164 aa5.99□□□□□ -1.45
LRRC28-218ENST00000560236 FBLN1P23142 703 aa5.99□□□□□ -1.45
LRRC28-218ENST00000560236 TACR1P25103 407 aa5.99□□□□□ -1.45
LRRC28-218ENST00000560236 PRR5P85299 388 aa5.99□□□□□ -1.45
LRRC28-218ENST00000560236 FOXO4P98177 505 aa5.99□□□□□ -1.45
LRRC28-218ENST00000560236 PLP2Q04941 152 aa5.99□□□□□ -1.45
LRRC28-218ENST00000560236 LSRQ86X29 649 aaPredicted RBP5.99□□□□□ -1.45
LRRC28-218ENST00000560236 PTCHD1Q96NR3 888 aa5.99□□□□□ -1.45
LRRC28-218ENST00000560236 FCRL3Q96P31 734 aaPredicted RBP5.99□□□□□ -1.45
LRRC28-218ENST00000560236 BDH2Q9BUT1 245 aa5.99□□□□□ -1.45
LRRC28-218ENST00000560236 FAN1Q9Y2M0 1017 aa5.99□□□□□ -1.45
LRRC28-218ENST00000560236 CD3EP07766 207 aa5.98□□□□□ -1.45
LRRC28-218ENST00000560236 ADRB1P08588 477 aa5.98□□□□□ -1.45
LRRC28-218ENST00000560236 ITGA4P13612 1032 aa5.98□□□□□ -1.45
LRRC28-218ENST00000560236 CORO7P57737 925 aa5.98□□□□□ -1.45
LRRC28-218ENST00000560236 NFKB2Q00653 900 aa5.98□□□□□ -1.45
LRRC28-218ENST00000560236 POU4F1Q01851 419 aa5.98□□□□□ -1.45
LRRC28-218ENST00000560236 ZYXQ15942 572 aaKnown RBP5.98□□□□□ -1.45
LRRC28-218ENST00000560236 UNC5AQ6ZN44 842 aa5.98□□□□□ -1.45
LRRC28-218ENST00000560236 USP48Q86UV5 1035 aa5.98□□□□□ -1.45
LRRC28-218ENST00000560236 FNIP1Q8TF40 1166 aa5.98□□□□□ -1.45
LRRC28-218ENST00000560236 BORCS6Q96GS4 357 aa5.98□□□□□ -1.45
LRRC28-218ENST00000560236 ZDHHC15Q96MV8 337 aa5.98□□□□□ -1.45
LRRC28-218ENST00000560236 RNF38Q9H0F5 515 aa5.98□□□□□ -1.45
LRRC28-218ENST00000560236 NOL6Q9H6R4 1146 aaKnown RBP5.98□□□□□ -1.45
LRRC28-218ENST00000560236 PLA2G2DQ9UNK4 145 aa5.98□□□□□ -1.45
LRRC28-218ENST00000560236 ZNF451Q9Y4E5 1061 aa5.98□□□□□ -1.45
LRRC28-218ENST00000560236 PMF1-BGLAPU3KQ54 211 aa5.98□□□□□ -1.45
LRRC28-218ENST00000560236 PRICKLE3O43900 615 aaPredicted RBP5.97□□□□□ -1.45
LRRC28-218ENST00000560236 PLA2G1BP04054 148 aaKnown RBP5.97□□□□□ -1.45
LRRC28-218ENST00000560236 IFNGR1P15260 489 aa5.97□□□□□ -1.45
LRRC28-218ENST00000560236 ATF2P15336 505 aa5.97□□□□□ -1.45
LRRC28-218ENST00000560236 GUCY2CP25092 1073 aa5.97□□□□□ -1.45
LRRC28-218ENST00000560236 L1CAMP32004 1257 aa5.97□□□□□ -1.45
LRRC28-218ENST00000560236 ZNF76P36508 570 aa5.97□□□□□ -1.45
LRRC28-218ENST00000560236 TCEAL1Q15170 157 aa5.97□□□□□ -1.45
LRRC28-218ENST00000560236 VWA3BQ502W6 1294 aa5.97□□□□□ -1.45
LRRC28-218ENST00000560236 GGNQ86UU5 652 aa5.97□□□□□ -1.45
LRRC28-218ENST00000560236 ADGRG2Q8IZP9 1017 aa5.97□□□□□ -1.45
LRRC28-218ENST00000560236 NLGN2Q8NFZ4 835 aa5.97□□□□□ -1.45
LRRC28-218ENST00000560236 USP40Q9NVE5 1235 aa5.97□□□□□ -1.45
LRRC28-218ENST00000560236 ZNF214Q9UL59 606 aaPredicted RBP5.97□□□□□ -1.45
LRRC28-218ENST00000560236 PPT2Q9UMR5 302 aa5.97□□□□□ -1.45
LRRC28-218ENST00000560236 NCAM1P13591 858 aa5.96□□□□□ -1.46
LRRC28-218ENST00000560236 RTP5Q14D33 572 aa5.96□□□□□ -1.46
LRRC28-218ENST00000560236 SPATS1Q496A3 300 aa5.96□□□□□ -1.46
LRRC28-218ENST00000560236 LDLRAD1Q5T700 205 aa5.96□□□□□ -1.46
LRRC28-218ENST00000560236 LIPIQ6XZB0 460 aa5.96□□□□□ -1.46
LRRC28-218ENST00000560236 RUFY4Q6ZNE9 571 aa5.96□□□□□ -1.46
LRRC28-218ENST00000560236 RBBP8NLQ8NC74 664 aaPredicted RBP5.96□□□□□ -1.46
LRRC28-218ENST00000560236 RNF34Q969K3 372 aa5.96□□□□□ -1.46
LRRC28-218ENST00000560236 DIS3Q9Y2L1 958 aaKnown RBP5.96□□□□□ -1.46
LRRC28-218ENST00000560236 A0A087WZG4 1122 aa5.95□□□□□ -1.46
LRRC28-218ENST00000560236 A0A1B0GTL3 188 aa5.95□□□□□ -1.46
LRRC28-218ENST00000560236 ASGR2P07307 311 aa5.95□□□□□ -1.46
LRRC28-218ENST00000560236 MC3RP41968 323 aa5.95□□□□□ -1.46
LRRC28-218ENST00000560236 EFEMP1Q12805 493 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms