RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-215	ENST00000556839	KCNQ5	Q9NR82	932 aa		7.67	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	PMF1-BGLAP	U3KQ54	211 aa		7.67	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	SRGAP3	O43295	1099 aa		7.66	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	CYBB	P04839	570 aa		7.66	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	CWF19L1	Q69YN2	538 aa	Known RBP	7.66	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	BICRAL	Q6AI39	1079 aa		7.66	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	PAQR3	Q6TCH7	311 aa		7.66	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	PKNOX2	Q96KN3	472 aa		7.66	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	KIAA1522	Q9P206	1035 aa	Predicted RBP	7.66	□□□□□ -1.18
RALGAPA1-215	ENST00000556839		A0A1B0GTL3	188 aa		7.65	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	GREM1	O60565	184 aa		7.65	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	PLA2G1B	P04054	148 aa	Known RBP	7.65	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	GSTM1	P09488	218 aa		7.65	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	NME1	P15531	152 aa	Known RBP	7.65	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	CRK	P46108	304 aa		7.65	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	FOXO4	P98177	505 aa		7.65	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	RTP2	Q5QGT7	225 aa		7.65	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	ERMP1	Q7Z2K6	904 aa		7.65	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	FERMT3	Q86UX7	667 aa		7.65	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	ANTXR1	Q9H6X2	564 aa		7.65	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	COPRS	Q9NQ92	184 aa		7.65	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	HCFC2	Q9Y5Z7	792 aa		7.65	□□□□□ -1.18
RALGAPA1-215	ENST00000556839	SHROOM4	Q9ULL8	1493 aa		7.64	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	TNFRSF10C	O14798	259 aa		7.64	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	FBLN1	P23142	703 aa		7.64	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	LRRFIP1	Q32MZ4	808 aa	Known RBP	7.64	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	CYP2R1	Q6VVX0	501 aa		7.64	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	FBXO33	Q7Z6M2	555 aa		7.64	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	DBR1	Q9UK59	544 aa	Known RBP	7.64	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	MCM4	P33991	863 aa		7.63	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	CLC	Q05315	142 aa		7.63	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	SEZ6	Q53EL9	994 aa		7.63	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	SAPCD2	Q86UD0	394 aa		7.63	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	ZNF296	Q8WUU4	475 aa	Predicted RBP	7.63	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	SLC12A9	Q9BXP2	914 aa		7.63	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	RNF38	Q9H0F5	515 aa		7.63	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	CCDC144CP	Q8IYA2	1237 aa		7.62	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	REXO1	Q8N1G1	1221 aa	Known RBP	7.62	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	ZNF526	Q8TF50	670 aa	Predicted RBP	7.62	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	PDLIM7	Q9NR12	457 aa		7.62	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	PLA2G2D	Q9UNK4	145 aa		7.62	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	SH3D21	A4FU49	640 aa		7.61	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	MEIS3P2	A8K0S8	358 aa		7.61	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	NCAM1	P13591	858 aa		7.61	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	ATF2	P15336	505 aa		7.61	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	ZNF165	P49910	485 aa		7.61	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	HTRA3	P83110	453 aa		7.61	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	APOBR	Q0VD83	1088 aa		7.61	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	C7orf61	Q8IZ16	206 aa		7.61	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	UBP1	Q9NZI7	540 aa		7.61	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	FAM86C2P	A6NEL3	165 aa		7.6	□□□□□ -1.19
RALGAPA1-215	ENST00000556839		F8W031	263 aa	Predicted RBP	7.6	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	TACR1	P25103	407 aa		7.6	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	CNR2	P34972	360 aa		7.6	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	MAGEA10	P43363	369 aa	Predicted RBP	7.6	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	GJA9	P57773	515 aa		7.6	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	PRR5	P85299	388 aa		7.6	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	DHRS1	Q96LJ7	313 aa		7.6	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	SLC9A7	Q96T83	725 aa		7.6	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	SUCO	Q9UBS9	1254 aa	Known RBP	7.6	□□□□□ -1.19
RALGAPA1-215	ENST00000556839		H0Y8X5	98 aa		7.59	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	FGF10	O15520	208 aa	Predicted RBP	7.59	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	MC3R	P41968	323 aa		7.59	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	CORO7	P57737	925 aa		7.59	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	TAF7L	Q5H9L4	462 aa		7.59	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	DDX1	Q92499	740 aa	Known RBP	7.59	□□□□□ -1.19
RALGAPA1-215	ENST00000556839	CDK11A	Q9UQ88	783 aa	Predicted RBP	7.59	□□□□□ -1.19
RALGAPA1-215	ENST00000556839		C9IYK1	514 aa		7.58	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	SHOX	O15266	292 aa		7.58	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	ZNF16	P17020	682 aa	Predicted RBP	7.58	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	NOL9	Q5SY16	702 aa	Known RBP	7.58	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	USP48	Q86UV5	1035 aa		7.58	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	CARF	Q8N187	725 aa		7.58	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	ALG3	Q92685	438 aa		7.58	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	SRRT	Q9BXP5	876 aa	Known RBP	7.58	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	SMPD4	Q9NXE4	827 aa		7.58	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	DUSP10	Q9Y6W6	482 aa		7.58	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	ASGR2	P07307	311 aa		7.57	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	NOP2	P46087	812 aa	Known RBP	7.57	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	ADAM17	P78536	824 aa		7.57	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	TAGLN	Q01995	201 aa	Known RBP	7.57	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	TDRD10	Q5VZ19	366 aa	Known RBP	7.57	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	ANP32E	Q9BTT0	268 aa		7.57	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	ADAMTS1	Q9UHI8	967 aa		7.57	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	NOBOX	O60393	691 aa		7.56	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	TBC1D8	O95759	1140 aa		7.56	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	TNFRSF1A	P19438	455 aa		7.56	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	DLX2	Q07687	328 aa	Predicted RBP	7.56	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	HS2ST1	Q7LGA3	356 aa		7.56	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	SMARCC1	Q92922	1105 aa	Predicted RBP	7.56	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	NKD1	Q969G9	470 aa		7.56	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	MRRF	Q96E11	262 aa	Known RBP	7.56	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	LNPK	Q9C0E8	428 aa		7.56	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	GGT7	Q9UJ14	662 aa		7.56	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	ERCC3	P19447	782 aa		7.55	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	L1CAM	P32004	1257 aa		7.55	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	ZXDA	P98168	799 aa		7.55	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	B3GNT8	Q7Z7M8	397 aa		7.55	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	CABP7	Q86V35	215 aa		7.55	□□□□□ -1.2
RALGAPA1-215	ENST00000556839	PTCHD1	Q96NR3	888 aa		7.55	□□□□□ -1.2

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