RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	MCOLN1	Q9GZU1	580 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	KCNH3	Q9ULD8	1083 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	SCAF8	Q9UPN6	1271 aa	Known RBP	10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	GJA3	Q9Y6H8	435 aa		10.82	□□□□□ -0.68
HNRNPC-223	ENST00000556142	MYH4	Q9Y623	1939 aa		10.81	□□□□□ -0.68
HNRNPC-223	ENST00000556142	CA12	O43570	354 aa		10.81	□□□□□ -0.68
HNRNPC-223	ENST00000556142	QRICH1	Q2TAL8	776 aa		10.81	□□□□□ -0.68
HNRNPC-223	ENST00000556142	KIF4B	Q2VIQ3	1234 aa		10.81	□□□□□ -0.68
HNRNPC-223	ENST00000556142	LONRF3	Q496Y0	759 aa		10.81	□□□□□ -0.68
HNRNPC-223	ENST00000556142	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.81	□□□□□ -0.68
HNRNPC-223	ENST00000556142	SASS6	Q6UVJ0	657 aa		10.81	□□□□□ -0.68
HNRNPC-223	ENST00000556142	KRBA2	Q6ZNG9	492 aa		10.81	□□□□□ -0.68
HNRNPC-223	ENST00000556142	KRT25	Q7Z3Z0	450 aa		10.81	□□□□□ -0.68
HNRNPC-223	ENST00000556142	RIC8A	Q9NPQ8	531 aa		10.81	□□□□□ -0.68
HNRNPC-223	ENST00000556142	KIAA1468	Q9P260	1216 aa		10.81	□□□□□ -0.68
HNRNPC-223	ENST00000556142	TUBE1	Q9UJT0	475 aa		10.81	□□□□□ -0.68
HNRNPC-223	ENST00000556142	CCDC194	A0A1B0GVG4	234 aa		10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142	BMP3	P12645	472 aa		10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142	LMOD1	P29536	600 aa	Predicted RBP	10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142	MAP2K2	P36507	400 aa		10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142	FMR1	Q06787	632 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142	CCDC173	Q0VFZ6	552 aa		10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142	INF2	Q27J81	1249 aa		10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142	ANO6	Q4KMQ2	910 aa		10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142	ARL6IP4	Q66PJ3	421 aa	Known RBP	10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142	FAM200A	Q8TCP9	573 aa		10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142	ERCC4	Q92889	916 aa	Predicted RBP	10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142	NUP88	Q99567	741 aa	Predicted RBP	10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142	SDF4	Q9BRK5	362 aa		10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142	TMEM60	Q9H2L4	133 aa		10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142	CBX8	Q9HC52	389 aa		10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142	ARHGEF10L	Q9HCE6	1279 aa		10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142	TMEM260	Q9NX78	707 aa		10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142	BAZ2B	Q9UIF8	2168 aa	Known RBP	10.8	□□□□□ -0.68
HNRNPC-223	ENST00000556142		A0A087X0B3	334 aa		10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142	AP5Z1	O43299	807 aa		10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142	ACTN4	O43707	911 aa	Known RBP	10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142	PLA2G6	O60733	806 aa		10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142	AOC2	O75106	756 aa		10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142	PRKAR2A	P13861	404 aa	Known RBP	10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142	MCM7	P33993	719 aa		10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142	HIRA	P54198	1017 aa	Predicted RBP	10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142	TNFAIP1	Q13829	316 aa		10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142	IQCB1	Q15051	598 aa		10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142	NONO	Q15233	471 aa	Known RBP eCLIP	10.79	□□□□□ -0.68	8e-7	■□□□□ 9.3
HNRNPC-223	ENST00000556142	SYDE2	Q5VT97	1194 aa		10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142	TRPM4	Q8TD43	1214 aa		10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142	EPSTI1	Q96J88	318 aa		10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142	VCPKMT	Q9H867	229 aa		10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142	GINM1	Q9NU53	330 aa		10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142	FAM13B	Q9NYF5	915 aa		10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142	GPRC5D	Q9NZD1	345 aa		10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142	BIN2	Q9UBW5	565 aa	Predicted RBP	10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142	TLL2	Q9Y6L7	1015 aa		10.79	□□□□□ -0.68
HNRNPC-223	ENST00000556142		A0A087WWV3	80 aa		10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	TMEM232	C9JQI7	657 aa		10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142		H7C1D1	291 aa		10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	POLR2D	O15514	142 aa	Known RBP	10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	CAVIN2	O95810	425 aa		10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	ADCY7	P51828	1080 aa		10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	DGKZ	Q13574	1117 aa		10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	CDC37	Q16543	378 aa	Predicted RBP	10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	STX1A	Q16623	288 aa		10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	JAKMIP3	Q5VZ66	844 aa		10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	CST9	Q5W186	159 aa		10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	C11orf57	Q6ZUT1	292 aa	Predicted RBP	10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	SH3RF1	Q7Z6J0	888 aa		10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	TBCK	Q8TEA7	893 aa		10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	SYMPK	Q92797	1274 aa	Known RBP	10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	GLIS2	Q9BZE0	524 aa	Predicted RBP	10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	DEFB129	Q9H1M3	183 aa		10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	DNAJC25	Q9H1X3	360 aa		10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	SERTAD1	Q9UHV2	236 aa		10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	ZNF112	Q9UJU3	913 aa		10.78	□□□□□ -0.68
HNRNPC-223	ENST00000556142	VWA3A	A6NCI4	1184 aa		10.77	□□□□□ -0.68
HNRNPC-223	ENST00000556142	TRAF5	O00463	557 aa		10.77	□□□□□ -0.68
HNRNPC-223	ENST00000556142	LAD1	O00515	517 aa		10.77	□□□□□ -0.68
HNRNPC-223	ENST00000556142	ASNS	P08243	561 aa		10.77	□□□□□ -0.68
HNRNPC-223	ENST00000556142	PRPH	P41219	470 aa		10.77	□□□□□ -0.68
HNRNPC-223	ENST00000556142	SARS	P49591	514 aa	Known RBP	10.77	□□□□□ -0.68
HNRNPC-223	ENST00000556142	NLRP12	P59046	1061 aa		10.77	□□□□□ -0.68
HNRNPC-223	ENST00000556142	ORC2	Q13416	577 aa	Predicted RBP	10.77	□□□□□ -0.68
HNRNPC-223	ENST00000556142	E2F4	Q16254	413 aa		10.77	□□□□□ -0.68
HNRNPC-223	ENST00000556142	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.77	□□□□□ -0.68
HNRNPC-223	ENST00000556142	NEK8	Q86SG6	692 aa		10.77	□□□□□ -0.68
HNRNPC-223	ENST00000556142	REXO1	Q8N1G1	1221 aa	Known RBP	10.77	□□□□□ -0.68
HNRNPC-223	ENST00000556142	CNNM3	Q8NE01	707 aa		10.77	□□□□□ -0.68
HNRNPC-223	ENST00000556142	ANO10	Q9NW15	660 aa		10.77	□□□□□ -0.68
HNRNPC-223	ENST00000556142	PRR12	Q9ULL5	1215 aa		10.77	□□□□□ -0.68
HNRNPC-223	ENST00000556142	MEIS2	O14770	477 aa		10.77	□□□□□ -0.69
HNRNPC-223	ENST00000556142	CTNND1	O60716	968 aa	Known RBP	10.77	□□□□□ -0.69
HNRNPC-223	ENST00000556142	LONP1	P36776	959 aa	Known RBP	10.77	□□□□□ -0.69
HNRNPC-223	ENST00000556142	EPS15	P42566	896 aa		10.77	□□□□□ -0.69
HNRNPC-223	ENST00000556142	MRPL12	P52815	198 aa	Known RBP	10.77	□□□□□ -0.69
HNRNPC-223	ENST00000556142	SNAP25	P60880	206 aa		10.77	□□□□□ -0.69
HNRNPC-223	ENST00000556142	PNOC	Q13519	176 aa		10.77	□□□□□ -0.69
HNRNPC-223	ENST00000556142	UBE2S	Q16763	222 aa		10.77	□□□□□ -0.69
HNRNPC-223	ENST00000556142	NT5DC1	Q5TFE4	455 aa		10.77	□□□□□ -0.69
HNRNPC-223	ENST00000556142	USP50	Q70EL3	339 aa	Predicted RBP	10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms