RNA–Protein interactions for RNA: ENST00000553970.1

SEC23A-206, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-206ENST00000553970 CCPG1Q9ULG6 757 aa20.34■□□□□ 0.85
SEC23A-206ENST00000553970 ADCY6O43306 1168 aa20.33■□□□□ 0.85
SEC23A-206ENST00000553970 ICAM1P05362 532 aa20.33■□□□□ 0.85
SEC23A-206ENST00000553970 PCP11498 1178 aaKnown RBP20.33■□□□□ 0.85
SEC23A-206ENST00000553970 FSCN1Q16658 493 aaKnown RBP20.33■□□□□ 0.85
SEC23A-206ENST00000553970 CCDC96Q2M329 555 aa20.33■□□□□ 0.85
SEC23A-206ENST00000553970 FAM126BQ8IXS8 530 aa20.33■□□□□ 0.85
SEC23A-206ENST00000553970 MPHOSPH6Q99547 160 aaKnown RBP20.33■□□□□ 0.85
SEC23A-206ENST00000553970 COL25A1Q9BXS0 654 aaPredicted RBP20.33■□□□□ 0.85
SEC23A-206ENST00000553970 VTA1Q9NP79 307 aa20.33■□□□□ 0.85
SEC23A-206ENST00000553970 PRR12Q9ULL5 1215 aa20.33■□□□□ 0.85
SEC23A-206ENST00000553970 CTDSPL2Q05D32 466 aa20.32■□□□□ 0.84
SEC23A-206ENST00000553970 SYMPKQ92797 1274 aaKnown RBP20.32■□□□□ 0.84
SEC23A-206ENST00000553970 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.32■□□□□ 0.844e-34■■□□□ 12.6
SEC23A-206ENST00000553970 IL17RBQ9NRM6 502 aa20.32■□□□□ 0.84
SEC23A-206ENST00000553970 TOMM22Q9NS69 142 aa20.32■□□□□ 0.84
SEC23A-206ENST00000553970 CYP39A1Q9NYL5 469 aa20.32■□□□□ 0.84
SEC23A-206ENST00000553970 GNEQ9Y223 722 aaKnown RBP20.32■□□□□ 0.84
SEC23A-206ENST00000553970 ZMYM6O95789 1325 aa20.31■□□□□ 0.84
SEC23A-206ENST00000553970 VCANP13611 3396 aa20.31■□□□□ 0.84
SEC23A-206ENST00000553970 PRUNE2Q8WUY3 3088 aa20.31■□□□□ 0.84
SEC23A-206ENST00000553970 SOWAHBA6NEL2 793 aa20.31■□□□□ 0.84
SEC23A-206ENST00000553970 NOVP48745 357 aa20.31■□□□□ 0.84
SEC23A-206ENST00000553970 NT5C2P49902 561 aa20.31■□□□□ 0.84
SEC23A-206ENST00000553970 ANKRD45Q5TZF3 282 aa20.31■□□□□ 0.84
SEC23A-206ENST00000553970 OTUD7AQ8TE49 926 aaPredicted RBP20.31■□□□□ 0.84
SEC23A-206ENST00000553970 TIFAQ96CG3 184 aa20.31■□□□□ 0.84
SEC23A-206ENST00000553970 SALL3Q9BXA9 1300 aa20.3■□□□□ 0.84
SEC23A-206ENST00000553970 CD4P01730 458 aa20.3■□□□□ 0.84
SEC23A-206ENST00000553970 FGRP09769 529 aa20.3■□□□□ 0.84
SEC23A-206ENST00000553970 TOP1P11387 765 aaKnown RBP20.3■□□□□ 0.84
SEC23A-206ENST00000553970 MFAP1P55081 439 aaKnown RBP20.3■□□□□ 0.84
SEC23A-206ENST00000553970 ITGA7Q13683 1181 aa20.3■□□□□ 0.84
SEC23A-206ENST00000553970 TMEM240Q5SV17 173 aa20.3■□□□□ 0.84
SEC23A-206ENST00000553970 BTNL9Q6UXG8 535 aa20.3■□□□□ 0.84
SEC23A-206ENST00000553970 NSMFQ6X4W1 530 aa20.3■□□□□ 0.84
SEC23A-206ENST00000553970 SLC43A3Q8NBI5 491 aa20.3■□□□□ 0.84
SEC23A-206ENST00000553970 RANBP17Q9H2T7 1088 aaKnown RBP20.3■□□□□ 0.84
SEC23A-206ENST00000553970 ZNF576Q9H609 170 aa20.3■□□□□ 0.84
SEC23A-206ENST00000553970 TCP11L1Q9NUJ3 509 aa20.3■□□□□ 0.84
SEC23A-206ENST00000553970 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.29■□□□□ 0.84
SEC23A-206ENST00000553970 B4DLN1 442 aa20.29■□□□□ 0.84
SEC23A-206ENST00000553970 CTAGE5O15320 804 aa20.29■□□□□ 0.84
SEC23A-206ENST00000553970 CSF2RAP15509 400 aa20.29■□□□□ 0.84
SEC23A-206ENST00000553970 MRPL12P52815 198 aaKnown RBP20.29■□□□□ 0.84
SEC23A-206ENST00000553970 BEX3Q00994 111 aa20.29■□□□□ 0.84
SEC23A-206ENST00000553970 AAMPQ13685 434 aa20.29■□□□□ 0.84
SEC23A-206ENST00000553970 RAB30Q15771 203 aa20.29■□□□□ 0.84
SEC23A-206ENST00000553970 MCMDC2Q4G0Z9 681 aa20.29■□□□□ 0.84
SEC23A-206ENST00000553970 BRDTQ58F21 947 aaPredicted RBP20.29■□□□□ 0.84
SEC23A-206ENST00000553970 CXCL17Q6UXB2 119 aa20.29■□□□□ 0.84
SEC23A-206ENST00000553970 MORC4Q8TE76 937 aa20.29■□□□□ 0.84
SEC23A-206ENST00000553970 GAS2L1Q99501 681 aaPredicted RBP20.29■□□□□ 0.84
SEC23A-206ENST00000553970 PPP1R12CQ9BZL4 782 aa20.29■□□□□ 0.84
SEC23A-206ENST00000553970 HIPK3Q9H422 1215 aa20.29■□□□□ 0.84
SEC23A-206ENST00000553970 IL23AQ9NPF7 189 aa20.29■□□□□ 0.84
SEC23A-206ENST00000553970 FOXP2O15409 715 aa20.28■□□□□ 0.84
SEC23A-206ENST00000553970 DYNC1LI2O43237 492 aaPredicted RBP20.28■□□□□ 0.84
SEC23A-206ENST00000553970 NMT2O60551 498 aa20.28■□□□□ 0.84
SEC23A-206ENST00000553970 PDE1AP54750 535 aa20.28■□□□□ 0.84
SEC23A-206ENST00000553970 RRP1P56182 461 aaKnown RBP20.28■□□□□ 0.84
SEC23A-206ENST00000553970 RASIP1Q5U651 963 aa20.28■□□□□ 0.84
SEC23A-206ENST00000553970 SYDE2Q5VT97 1194 aa20.28■□□□□ 0.84
SEC23A-206ENST00000553970 TTC14Q96N46 770 aa20.28■□□□□ 0.84
SEC23A-206ENST00000553970 RNF41Q9H4P4 317 aaPredicted RBP20.28■□□□□ 0.84
SEC23A-206ENST00000553970 POLR3EQ9NVU0 708 aa20.28■□□□□ 0.84
SEC23A-206ENST00000553970 MSRAQ9UJ68 235 aa20.28■□□□□ 0.84
SEC23A-206ENST00000553970 MTMR7Q9Y216 660 aa20.28■□□□□ 0.84
SEC23A-206ENST00000553970 RAD50Q92878 1312 aa20.27■□□□□ 0.84
SEC23A-206ENST00000553970 SUPT20HL2P0C7V6 817 aa20.27■□□□□ 0.84
SEC23A-206ENST00000553970 SMPD1P17405 629 aa20.27■□□□□ 0.84
SEC23A-206ENST00000553970 CPT1AP50416 773 aa20.27■□□□□ 0.84
SEC23A-206ENST00000553970 IRX5P78411 483 aaPredicted RBP20.27■□□□□ 0.84
SEC23A-206ENST00000553970 HDAC1Q13547 482 aaPredicted RBP20.27■□□□□ 0.84
SEC23A-206ENST00000553970 DUSP28Q4G0W2 176 aa20.27■□□□□ 0.84
SEC23A-206ENST00000553970 MUM1L1Q5H9M0 696 aa20.27■□□□□ 0.84
SEC23A-206ENST00000553970 RRP12Q5JTH9 1297 aaKnown RBP20.27■□□□□ 0.84
SEC23A-206ENST00000553970 KIAA1211Q6ZU35 1233 aa20.27■□□□□ 0.84
SEC23A-206ENST00000553970 FBXO16Q8IX29 292 aaPredicted RBP20.27■□□□□ 0.84
SEC23A-206ENST00000553970 RPUSD2Q8IZ73 545 aaKnown RBP20.27■□□□□ 0.84
SEC23A-206ENST00000553970 HERVK_113Q902F9 699 aa20.27■□□□□ 0.84
SEC23A-206ENST00000553970 LRRC37A2A6NM11 1700 aa20.27■□□□□ 0.83
SEC23A-206ENST00000553970 ASTN1O14525 1302 aa20.27■□□□□ 0.83
SEC23A-206ENST00000553970 FGAP02671 866 aa20.26■□□□□ 0.83
SEC23A-206ENST00000553970 FGBP02675 491 aa20.26■□□□□ 0.83
SEC23A-206ENST00000553970 GRIN2CQ14957 1233 aa20.26■□□□□ 0.83
SEC23A-206ENST00000553970 VPS53Q5VIR6 699 aa20.26■□□□□ 0.83
SEC23A-206ENST00000553970 TAPT1Q6NXT6 567 aa20.26■□□□□ 0.83
SEC23A-206ENST00000553970 ZNF365Q70YC5 407 aa20.26■□□□□ 0.83
SEC23A-206ENST00000553970 CHMP4CQ96CF2 233 aa20.26■□□□□ 0.83
SEC23A-206ENST00000553970 MAF1Q9H063 256 aa20.26■□□□□ 0.83
SEC23A-206ENST00000553970 GPHNQ9NQX3 736 aaPredicted RBP20.26■□□□□ 0.83
SEC23A-206ENST00000553970 PTPDC1A2A3K4 754 aa20.25■□□□□ 0.83
SEC23A-206ENST00000553970 NKRFO15226 690 aaKnown RBP eCLIP20.25■□□□□ 0.835e-14■□□□□ 8.7
SEC23A-206ENST00000553970 CYP2C18P33260 490 aa20.25■□□□□ 0.83
SEC23A-206ENST00000553970 ALDH5A1P51649 535 aaPredicted RBP20.25■□□□□ 0.83
SEC23A-206ENST00000553970 BAATQ14032 418 aaPredicted RBP20.25■□□□□ 0.83
SEC23A-206ENST00000553970 CCDC178Q5BJE1 867 aa20.25■□□□□ 0.83
SEC23A-206ENST00000553970 MFSD6Q6ZSS7 791 aa20.25■□□□□ 0.83
SEC23A-206ENST00000553970 C16orf59Q7L2K0 433 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms