RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 THNSL2Q86YJ6 484 aa7.42□□□□□ -1.22
SYNE2-210ENST00000553455 ATP13A1Q9HD20 1204 aa7.42□□□□□ -1.22
SYNE2-210ENST00000553455 NDOR1Q9UHB4 597 aa7.42□□□□□ -1.22
SYNE2-210ENST00000553455 DUSP13Q9UII6 198 aa7.42□□□□□ -1.22
SYNE2-210ENST00000553455 TMEFF2Q9UIK5 374 aaPredicted RBP7.42□□□□□ -1.22
SYNE2-210ENST00000553455 TCFL5Q9UL49 500 aa7.42□□□□□ -1.22
SYNE2-210ENST00000553455 PCDHA11Q9Y5I1 949 aa7.42□□□□□ -1.22
SYNE2-210ENST00000553455 COL4A3BPQ9Y5P4 624 aa7.42□□□□□ -1.22
SYNE2-210ENST00000553455 TMEM265A0A087WTH1 108 aa7.41□□□□□ -1.22
SYNE2-210ENST00000553455 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.41□□□□□ -1.22
SYNE2-210ENST00000553455 DNAJC8O75937 253 aaPredicted RBP7.41□□□□□ -1.22
SYNE2-210ENST00000553455 ESR1P03372 595 aa7.41□□□□□ -1.22
SYNE2-210ENST00000553455 NOP2P46087 812 aaKnown RBP7.41□□□□□ -1.22
SYNE2-210ENST00000553455 PCBP3P57721 371 aaKnown RBP7.41□□□□□ -1.22
SYNE2-210ENST00000553455 ACBD5Q5T8D3 534 aaPredicted RBP7.41□□□□□ -1.22
SYNE2-210ENST00000553455 STYK1Q6J9G0 422 aa7.41□□□□□ -1.22
SYNE2-210ENST00000553455 RNF111Q6ZNA4 994 aa7.41□□□□□ -1.22
SYNE2-210ENST00000553455 USP53Q70EK8 1073 aa7.41□□□□□ -1.22
SYNE2-210ENST00000553455 TMPRSS7Q7RTY8 843 aa7.41□□□□□ -1.22
SYNE2-210ENST00000553455 FGD2Q7Z6J4 655 aa7.41□□□□□ -1.22
SYNE2-210ENST00000553455 CCDC103Q8IW40 242 aa7.41□□□□□ -1.22
SYNE2-210ENST00000553455 ANKRD13AQ8IZ07 590 aa7.41□□□□□ -1.22
SYNE2-210ENST00000553455 PTPRN2Q92932 1015 aa7.41□□□□□ -1.22
SYNE2-210ENST00000553455 SCLYQ96I15 445 aa7.41□□□□□ -1.22
SYNE2-210ENST00000553455 PCDH12Q9NPG4 1184 aa7.41□□□□□ -1.22
SYNE2-210ENST00000553455 RNF112Q9ULX5 631 aa7.41□□□□□ -1.22
SYNE2-210ENST00000553455 TMEM82A0PJX8 343 aa7.4□□□□□ -1.22
SYNE2-210ENST00000553455 FAM83GA6ND36 823 aa7.4□□□□□ -1.22
SYNE2-210ENST00000553455 PPM1GO15355 546 aaPredicted RBP7.4□□□□□ -1.22
SYNE2-210ENST00000553455 TGFB1P01137 390 aa7.4□□□□□ -1.22
SYNE2-210ENST00000553455 GSTM1P09488 218 aa7.4□□□□□ -1.22
SYNE2-210ENST00000553455 TEKQ02763 1124 aa7.4□□□□□ -1.22
SYNE2-210ENST00000553455 MSMPQ1L6U9 139 aa7.4□□□□□ -1.22
SYNE2-210ENST00000553455 KCNT2Q6UVM3 1135 aa7.4□□□□□ -1.22
SYNE2-210ENST00000553455 MAMDC2Q7Z304 686 aaPredicted RBP7.4□□□□□ -1.22
SYNE2-210ENST00000553455 PPIL6Q8IXY8 311 aa7.4□□□□□ -1.22
SYNE2-210ENST00000553455 AP5S1Q9NUS5 200 aa7.4□□□□□ -1.22
SYNE2-210ENST00000553455 ZNF281Q9Y2X9 895 aa7.4□□□□□ -1.22
SYNE2-210ENST00000553455 TRAF6Q9Y4K3 522 aa7.4□□□□□ -1.22
SYNE2-210ENST00000553455 NPFFR2Q9Y5X5 522 aa7.4□□□□□ -1.22
SYNE2-210ENST00000553455 GSG1L2A8MUP6 293 aa7.39□□□□□ -1.23
SYNE2-210ENST00000553455 FGF10O15520 208 aaPredicted RBP7.39□□□□□ -1.23
SYNE2-210ENST00000553455 FKTNO75072 461 aa7.39□□□□□ -1.23
SYNE2-210ENST00000553455 MYCLP1P12525 358 aaPredicted RBP7.39□□□□□ -1.23
SYNE2-210ENST00000553455 PLS3P13797 630 aa7.39□□□□□ -1.23
SYNE2-210ENST00000553455 LTKP29376 864 aa7.39□□□□□ -1.23
SYNE2-210ENST00000553455 SEPHS1P49903 392 aa7.39□□□□□ -1.23
SYNE2-210ENST00000553455 AMPD3Q01432 767 aa7.39□□□□□ -1.23
SYNE2-210ENST00000553455 EEF1DP3Q658K8 133 aa7.39□□□□□ -1.23
SYNE2-210ENST00000553455 ZPBP2Q6X784 338 aa7.39□□□□□ -1.23
SYNE2-210ENST00000553455 KRT26Q7Z3Y9 468 aa7.39□□□□□ -1.23
SYNE2-210ENST00000553455 CREG2Q8IUH2 290 aa7.39□□□□□ -1.23
SYNE2-210ENST00000553455 DCAF4Q8WV16 495 aa7.39□□□□□ -1.23
SYNE2-210ENST00000553455 HRASLS5Q96KN8 279 aa7.39□□□□□ -1.23
SYNE2-210ENST00000553455 INTS7Q9NVH2 962 aaKnown RBP7.39□□□□□ -1.23
SYNE2-210ENST00000553455 CLEC1BQ9P126 229 aa7.39□□□□□ -1.23
SYNE2-210ENST00000553455 MAGEC2Q9UBF1 373 aaPredicted RBP7.39□□□□□ -1.23
SYNE2-210ENST00000553455 LOC100996750A0A140TA64 210 aa7.38□□□□□ -1.23
SYNE2-210ENST00000553455 MEFVO15553 781 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-210ENST00000553455 EFCAB14O75071 495 aa7.38□□□□□ -1.23
SYNE2-210ENST00000553455 STAT3P40763 770 aa7.38□□□□□ -1.23
SYNE2-210ENST00000553455 CEBPAP49715 358 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-210ENST00000553455 E4F1Q66K89 784 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-210ENST00000553455 RNF180Q86T96 592 aa7.38□□□□□ -1.23
SYNE2-210ENST00000553455 LRRTM3Q86VH5 581 aa7.38□□□□□ -1.23
SYNE2-210ENST00000553455 KSR1Q8IVT5 923 aa7.38□□□□□ -1.23
SYNE2-210ENST00000553455 ZCRB1Q8TBF4 217 aaKnown RBP7.38□□□□□ -1.23
SYNE2-210ENST00000553455 TARS2Q9BW92 718 aaKnown RBP7.38□□□□□ -1.23
SYNE2-210ENST00000553455 KRTAP4-6Q9BYQ5 205 aa7.38□□□□□ -1.23
SYNE2-210ENST00000553455 NOP58Q9Y2X3 529 aaKnown RBP7.38□□□□□ -1.23
SYNE2-210ENST00000553455 hCG_2014768A0A024R1R8 64 aa7.37□□□□□ -1.23
SYNE2-210ENST00000553455 PDE8AO60658 829 aa7.37□□□□□ -1.23
SYNE2-210ENST00000553455 RASGRP1O95267 797 aa7.37□□□□□ -1.23
SYNE2-210ENST00000553455 POU3F3P20264 500 aaPredicted RBP7.37□□□□□ -1.23
SYNE2-210ENST00000553455 PRKCQQ04759 706 aa7.37□□□□□ -1.23
SYNE2-210ENST00000553455 EGR3Q06889 387 aa7.37□□□□□ -1.23
SYNE2-210ENST00000553455 AOC3Q16853 763 aa7.37□□□□□ -1.23
SYNE2-210ENST00000553455 PRSS36Q5K4E3 855 aa7.37□□□□□ -1.23
SYNE2-210ENST00000553455 MBLAC2Q68D91 279 aa7.37□□□□□ -1.23
SYNE2-210ENST00000553455 PTCHD1Q96NR3 888 aa7.37□□□□□ -1.23
SYNE2-210ENST00000553455 PHF20Q9BVI0 1012 aa7.37□□□□□ -1.23
SYNE2-210ENST00000553455 CDADC1Q9BWV3 514 aa7.37□□□□□ -1.23
SYNE2-210ENST00000553455 FAM126AQ9BYI3 521 aaPredicted RBP7.37□□□□□ -1.23
SYNE2-210ENST00000553455 ERVK13-1Q9NX77 482 aa7.37□□□□□ -1.23
SYNE2-210ENST00000553455 TNPO3Q9Y5L0 923 aaKnown RBP7.37□□□□□ -1.23
SYNE2-210ENST00000553455 SSU72P8A0A1W2PR75 194 aa7.36□□□□□ -1.23
SYNE2-210ENST00000553455 TCRBV16S1A1N1A0A5B0 115 aa7.36□□□□□ -1.23
SYNE2-210ENST00000553455 MSCO60682 206 aa7.36□□□□□ -1.23
SYNE2-210ENST00000553455 CRTAMO95727 393 aa7.36□□□□□ -1.23
SYNE2-210ENST00000553455 HMGB1P09429 215 aaKnown RBP7.36□□□□□ -1.23
SYNE2-210ENST00000553455 LCP1P13796 627 aa7.36□□□□□ -1.23
SYNE2-210ENST00000553455 LTBRP36941 435 aa7.36□□□□□ -1.23
SYNE2-210ENST00000553455 CD96P40200 585 aa7.36□□□□□ -1.23
SYNE2-210ENST00000553455 KCNAB2Q13303 367 aa7.36□□□□□ -1.23
SYNE2-210ENST00000553455 ZNF460Q14592 562 aa7.36□□□□□ -1.23
SYNE2-210ENST00000553455 INF2Q27J81 1249 aa7.36□□□□□ -1.23
SYNE2-210ENST00000553455 RSPO2Q6UXX9 243 aaPredicted RBP7.36□□□□□ -1.23
SYNE2-210ENST00000553455 WFDC3Q8IUB2 231 aa7.36□□□□□ -1.23
SYNE2-210ENST00000553455 RPUSD2Q8IZ73 545 aaKnown RBP7.36□□□□□ -1.23
SYNE2-210ENST00000553455 TMEM52Q8NDY8 209 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms