RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 TIFAQ96CG3 184 aa7.67□□□□□ -1.18
VPS29-210ENST00000552130 YIPF4Q9BSR8 244 aa7.67□□□□□ -1.18
VPS29-210ENST00000552130 BCO2Q9BYV7 579 aa7.67□□□□□ -1.18
VPS29-210ENST00000552130 LRRC27Q9C0I9 530 aa7.67□□□□□ -1.18
VPS29-210ENST00000552130 EVLQ9UI08 416 aaPredicted RBP7.67□□□□□ -1.18
VPS29-210ENST00000552130 NUB1Q9Y5A7 615 aa7.67□□□□□ -1.18
VPS29-210ENST00000552130 KLRG2A4D1S0 409 aaPredicted RBP7.66□□□□□ -1.18
VPS29-210ENST00000552130 PIP5K1CO60331 668 aa7.66□□□□□ -1.18
VPS29-210ENST00000552130 RFPL1O75677 317 aa7.66□□□□□ -1.18
VPS29-210ENST00000552130 FAM87AP0C7U9 286 aa7.66□□□□□ -1.18
VPS29-210ENST00000552130 FAM160A1Q05DH4 1040 aa7.66□□□□□ -1.18
VPS29-210ENST00000552130 CDK5R2Q13319 367 aa7.66□□□□□ -1.18
VPS29-210ENST00000552130 ALDH1L2Q3SY69 923 aa7.66□□□□□ -1.18
VPS29-210ENST00000552130 PRPF40BQ6NWY9 871 aaKnown RBP7.66□□□□□ -1.18
VPS29-210ENST00000552130 MMS22LQ6ZRQ5 1243 aa7.66□□□□□ -1.18
VPS29-210ENST00000552130 FAM181AQ8N9Y4 354 aa7.66□□□□□ -1.18
VPS29-210ENST00000552130 LRRN4CLQ8ND94 238 aa7.66□□□□□ -1.18
VPS29-210ENST00000552130 WDR89Q96FK6 387 aaPredicted RBP7.66□□□□□ -1.18
VPS29-210ENST00000552130 TRMT2BQ96GJ1 504 aaKnown RBP7.66□□□□□ -1.18
VPS29-210ENST00000552130 MPP4Q96JB8 637 aa7.66□□□□□ -1.18
VPS29-210ENST00000552130 RHOVQ96L33 236 aa7.66□□□□□ -1.18
VPS29-210ENST00000552130 ELAC2Q9BQ52 826 aaKnown RBP7.66□□□□□ -1.18
VPS29-210ENST00000552130 LGR6Q9HBX8 967 aa7.66□□□□□ -1.18
VPS29-210ENST00000552130 SLC5A4Q9NY91 659 aa7.66□□□□□ -1.18
VPS29-210ENST00000552130 C9orf78Q9NZ63 289 aaPredicted RBP7.66□□□□□ -1.18
VPS29-210ENST00000552130 PCDHGC5Q9Y5F6 944 aa7.66□□□□□ -1.18
VPS29-210ENST00000552130 PRSS47A8MTI9 375 aa7.65□□□□□ -1.18
VPS29-210ENST00000552130 RFPL3O75679 317 aa7.65□□□□□ -1.18
VPS29-210ENST00000552130 EYA4O95677 639 aa7.65□□□□□ -1.18
VPS29-210ENST00000552130 CT47B1P0C2W7 299 aaPredicted RBP7.65□□□□□ -1.18
VPS29-210ENST00000552130 GARTP22102 1010 aa7.65□□□□□ -1.18
VPS29-210ENST00000552130 SERPINB3P29508 390 aa7.65□□□□□ -1.18
VPS29-210ENST00000552130 GSTT1P30711 240 aa7.65□□□□□ -1.18
VPS29-210ENST00000552130 RBM10P98175 930 aaKnown RBP7.65□□□□□ -1.18
VPS29-210ENST00000552130 AP3B2Q13367 1082 aa7.65□□□□□ -1.18
VPS29-210ENST00000552130 TOMM20Q15388 145 aa7.65□□□□□ -1.18
VPS29-210ENST00000552130 PUM3Q15397 648 aaKnown RBP7.65□□□□□ -1.18
VPS29-210ENST00000552130 PPP2R5EQ16537 467 aa7.65□□□□□ -1.18
VPS29-210ENST00000552130 KRTAP19-4Q3LI73 84 aa7.65□□□□□ -1.18
VPS29-210ENST00000552130 C1QTNF12Q5T7M4 302 aa7.65□□□□□ -1.18
VPS29-210ENST00000552130 CXorf57Q6NSI4 855 aaKnown RBP7.65□□□□□ -1.18
VPS29-210ENST00000552130 KRT77Q7Z794 578 aa7.65□□□□□ -1.18
VPS29-210ENST00000552130 ST13P5Q8NFI4 369 aaPredicted RBP7.65□□□□□ -1.18
VPS29-210ENST00000552130 BHLHE22Q8NFJ8 381 aaPredicted RBP7.65□□□□□ -1.18
VPS29-210ENST00000552130 JPH3Q8WXH2 748 aaPredicted RBP7.65□□□□□ -1.18
VPS29-210ENST00000552130 FANCD2OSQ96PS1 177 aa7.65□□□□□ -1.18
VPS29-210ENST00000552130 CRBNQ96SW2 442 aa7.65□□□□□ -1.18
VPS29-210ENST00000552130 CCDC8Q9H0W5 538 aaPredicted RBP7.65□□□□□ -1.18
VPS29-210ENST00000552130 PRDM11Q9NQV5 511 aa7.65□□□□□ -1.18
VPS29-210ENST00000552130 PHLDB1Q86UU1 1377 aa7.64□□□□□ -1.19
VPS29-210ENST00000552130 ANO9A1A5B4 782 aa7.64□□□□□ -1.19
VPS29-210ENST00000552130 ABLIM3O94929 683 aa7.64□□□□□ -1.19
VPS29-210ENST00000552130 RBP3P10745 1247 aa7.64□□□□□ -1.19
VPS29-210ENST00000552130 RLBP1P12271 317 aa7.64□□□□□ -1.19
VPS29-210ENST00000552130 ZSCAN20P17040 1043 aaPredicted RBP7.64□□□□□ -1.19
VPS29-210ENST00000552130 CD96P40200 585 aa7.64□□□□□ -1.19
VPS29-210ENST00000552130 CRKP46108 304 aa7.64□□□□□ -1.19
VPS29-210ENST00000552130 CASP7P55210 303 aa7.64□□□□□ -1.19
VPS29-210ENST00000552130 OXCT1P55809 520 aa7.64□□□□□ -1.19
VPS29-210ENST00000552130 TCIRG1Q13488 830 aa7.64□□□□□ -1.19
VPS29-210ENST00000552130 CBX2Q14781 532 aaPredicted RBP7.64□□□□□ -1.19
VPS29-210ENST00000552130 IFI16Q16666 785 aaKnown RBP7.64□□□□□ -1.19
VPS29-210ENST00000552130 STRA8Q7Z7C7 330 aa7.64□□□□□ -1.19
VPS29-210ENST00000552130 SLITRK4Q8IW52 837 aa7.64□□□□□ -1.19
VPS29-210ENST00000552130 OR6P1Q8NGX9 317 aa7.64□□□□□ -1.19
VPS29-210ENST00000552130 ZNF669Q96BR6 464 aaPredicted RBP7.64□□□□□ -1.19
VPS29-210ENST00000552130 TNKS2Q9H2K2 1166 aa7.64□□□□□ -1.19
VPS29-210ENST00000552130 PLCB1Q9NQ66 1216 aa7.64□□□□□ -1.19
VPS29-210ENST00000552130 PLAGL2Q9UPG8 496 aa7.64□□□□□ -1.19
VPS29-210ENST00000552130 IPPQ9Y573 584 aa7.64□□□□□ -1.19
VPS29-210ENST00000552130 NBNO60934 754 aa7.63□□□□□ -1.19
VPS29-210ENST00000552130 GADD45BO75293 160 aaPredicted RBP7.63□□□□□ -1.19
VPS29-210ENST00000552130 FAM153BP0C7A2 387 aa7.63□□□□□ -1.19
VPS29-210ENST00000552130 GPSM2P81274 684 aa7.63□□□□□ -1.19
VPS29-210ENST00000552130 PDE3AQ14432 1141 aa7.63□□□□□ -1.19
VPS29-210ENST00000552130 MAP3K11Q16584 847 aa7.63□□□□□ -1.19
VPS29-210ENST00000552130 SNAP47Q5SQN1 464 aa7.63□□□□□ -1.19
VPS29-210ENST00000552130 PDXDC1Q6P996 788 aa7.63□□□□□ -1.19
VPS29-210ENST00000552130 TOGARAM2Q6ZUX3 1019 aa7.63□□□□□ -1.19
VPS29-210ENST00000552130 IFNL2Q8IZJ0 200 aa7.63□□□□□ -1.19
VPS29-210ENST00000552130 PHC3Q8NDX5 983 aa7.63□□□□□ -1.19
VPS29-210ENST00000552130 FLAD1Q8NFF5 587 aa7.63□□□□□ -1.19
VPS29-210ENST00000552130 PI4K2BQ8TCG2 481 aa7.63□□□□□ -1.19
VPS29-210ENST00000552130 ATXN2LQ8WWM7 1075 aaKnown RBP7.63□□□□□ -1.19
VPS29-210ENST00000552130 SLC26A8Q96RN1 970 aa7.63□□□□□ -1.19
VPS29-210ENST00000552130 TARS2Q9BW92 718 aaKnown RBP7.63□□□□□ -1.19
VPS29-210ENST00000552130 KRTAP4-5Q9BYR2 181 aa7.63□□□□□ -1.19
VPS29-210ENST00000552130 RHOBTB2Q9BYZ6 727 aa7.63□□□□□ -1.19
VPS29-210ENST00000552130 CCDC86Q9H6F5 360 aaKnown RBP7.63□□□□□ -1.19
VPS29-210ENST00000552130 FBRSQ9HAH7 460 aa7.63□□□□□ -1.19
VPS29-210ENST00000552130 NPHS2Q9NP85 383 aa7.63□□□□□ -1.19
VPS29-210ENST00000552130 DISC1Q9NRI5 854 aa7.63□□□□□ -1.19
VPS29-210ENST00000552130 MORC2Q9Y6X9 1032 aaPredicted RBP7.63□□□□□ -1.19
VPS29-210ENST00000552130 FIBPO43427 364 aa7.62□□□□□ -1.19
VPS29-210ENST00000552130 ZNF862O60290 1169 aa7.62□□□□□ -1.19
VPS29-210ENST00000552130 DDAH1O94760 285 aa7.62□□□□□ -1.19
VPS29-210ENST00000552130 PGRP06401 933 aa7.62□□□□□ -1.19
VPS29-210ENST00000552130 DDIT3P35638 169 aa7.62□□□□□ -1.19
VPS29-210ENST00000552130 BIRC3Q13489 604 aa7.62□□□□□ -1.19
VPS29-210ENST00000552130 RPS26P11Q5JNZ5 115 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms