RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 CASP7P55210 303 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 FXNQ16595 210 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 PPM1JQ5JR12 505 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 TMEM201Q5SNT2 666 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 LARP1BQ659C4 914 aaKnown RBP3.25□□□□□ -1.89
CPSF6-207ENST00000551516 TREML4Q6UXN2 200 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 ACAD11Q709F0 780 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 CDC37L1Q7L3B6 337 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 LRP10Q7Z4F1 713 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 FAM177A1Q8N128 213 aaPredicted RBP3.25□□□□□ -1.89
CPSF6-207ENST00000551516 FAM169BQ8N8A8 192 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 C12orf50Q8NA57 414 aaPredicted RBP3.25□□□□□ -1.89
CPSF6-207ENST00000551516 KCT2Q8NC54 265 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 RNF214Q8ND24 703 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 ZNF507Q8TCN5 953 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 UBASH3BQ8TF42 649 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 TMEM40Q8WWA1 233 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 LTV1Q96GA3 475 aaPredicted RBP3.25□□□□□ -1.89
CPSF6-207ENST00000551516 CARD11Q9BXL7 1154 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 TMPRSS13Q9BYE2 586 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 WNT10AQ9GZT5 417 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 ATXN3LQ9H3M9 355 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 PIF1Q9H611 641 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 SSU72Q9NP77 194 aaKnown RBP3.25□□□□□ -1.89
CPSF6-207ENST00000551516 TERF2IPQ9NYB0 399 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 REV1Q9UBZ9 1251 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 KLHL3Q9UH77 587 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 ADAM30Q9UKF2 790 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 AP4E1Q9UPM8 1137 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 CORINQ9Y5Q5 1042 aa3.25□□□□□ -1.89
CPSF6-207ENST00000551516 MYH14Q7Z406 1995 aaKnown RBP3.25□□□□□ -1.89
CPSF6-207ENST00000551516 DOT1LQ8TEK3 1739 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 ANKRD26Q9UPS8 1709 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 TNRC18O15417 2968 aaPredicted RBP3.24□□□□□ -1.89
CPSF6-207ENST00000551516 KCPQ6ZWJ8 1503 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 PASKQ96RG2 1323 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 C5P01031 1676 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 TAF1LQ8IZX4 1826 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 CCDC85CA6NKD9 419 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 SLC22A31A6NKX4 558 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 ERVV-2B6SEH9 535 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 SART1O43290 800 aaKnown RBP3.24□□□□□ -1.89
CPSF6-207ENST00000551516 RNGTTO60942 597 aaKnown RBP3.24□□□□□ -1.89
CPSF6-207ENST00000551516 DDAH1O94760 285 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 ARHGEF15O94989 841 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 DLGAP3O95886 979 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 ELNP15502 786 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 NME1P15531 152 aaKnown RBP3.24□□□□□ -1.89
CPSF6-207ENST00000551516 RAG1P15918 1043 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 HOXB4P17483 251 aaPredicted RBP3.24□□□□□ -1.89
CPSF6-207ENST00000551516 SNRPNP63162 240 aaKnown RBP3.24□□□□□ -1.89
CPSF6-207ENST00000551516 RING1Q06587 406 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 SOX4Q06945 474 aaPredicted RBP3.24□□□□□ -1.89
CPSF6-207ENST00000551516 FSTL1Q12841 308 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 IFRD2Q12894 506 aaPredicted RBP3.24□□□□□ -1.89
CPSF6-207ENST00000551516 SERINC3Q13530 473 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 INTS3Q68E01 1043 aaKnown RBP3.24□□□□□ -1.89
CPSF6-207ENST00000551516 SLC6A19Q695T7 634 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 FDX2Q6P4F2 183 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 LINC00114Q6XXX2 140 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 NLRC3Q7RTR2 1065 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 DYMQ7RTS9 669 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 HDGFL2Q7Z4V5 671 aaPredicted RBP3.24□□□□□ -1.89
CPSF6-207ENST00000551516 HID1Q8IV36 788 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 NLGN1Q8N2Q7 840 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 TMEM130Q8N3G9 435 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 TAB3Q8N5C8 712 aaPredicted RBP3.24□□□□□ -1.89
CPSF6-207ENST00000551516 BEND7Q8N7W2 519 aaPredicted RBP3.24□□□□□ -1.89
CPSF6-207ENST00000551516 C19orf47Q8N9M1 422 aaKnown RBP3.24□□□□□ -1.89
CPSF6-207ENST00000551516 SMG8Q8ND04 991 aaKnown RBP3.24□□□□□ -1.89
CPSF6-207ENST00000551516 FAM13CQ8NE31 585 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 SMARCC1Q92922 1105 aaPredicted RBP3.24□□□□□ -1.89
CPSF6-207ENST00000551516 TRIM11Q96F44 468 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 COG3Q96JB2 828 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 FANCD2OSQ96PS1 177 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 CCDC113Q9H0I3 377 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 ANTXR1Q9H6X2 564 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 SUGCTQ9HAC7 445 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 PIDD1Q9HB75 910 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 ST7Q9NRC1 585 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 CRIM1Q9NZV1 1036 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 GMIPQ9P107 970 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 SRP68Q9UHB9 627 aaKnown RBP3.24□□□□□ -1.89
CPSF6-207ENST00000551516 PCDHGC5Q9Y5F6 944 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 CARMIL3Q8ND23 1372 aa3.24□□□□□ -1.89
CPSF6-207ENST00000551516 SOS1Q07889 1333 aaPredicted RBP3.23□□□□□ -1.89
CPSF6-207ENST00000551516 MRC1P22897 1456 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 RGPD2P0DJD1 1756 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 A0A0C4DFX4 3053 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 A0A1W2PQH9 124 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 GLTPD2A6NH11 291 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 CHURC1-FNTBB4DL54 471 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 FAM229AH3BQW9 127 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 PDPK1O15530 556 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 WISP1O95388 367 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 CYP19A1P11511 503 aaPredicted RBP3.23□□□□□ -1.89
CPSF6-207ENST00000551516 ADH5P11766 374 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 CHRNA5P30532 468 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 GBP1P32455 592 aa3.23□□□□□ -1.89
CPSF6-207ENST00000551516 BRCA1P38398 1863 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms