RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 SMCO2A6NFE2 343 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 PP2D1A8MPX8 630 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 POLRMTO00411 1230 aaKnown RBP7.36□□□□□ -1.23
PTPRO-208ENST00000542557 PSMA7O14818 248 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 PDHBP11177 359 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 CDC25AP30304 524 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 CCT6AP40227 531 aaKnown RBP7.36□□□□□ -1.23
PTPRO-208ENST00000542557 FXR1P51114 621 aaKnown RBP eCLIP7.36□□□□□ -1.23
PTPRO-208ENST00000542557 DDR1Q08345 913 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 ASPRV1Q53RT3 343 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 SOGA3Q5TF21 947 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 PPP1R18Q6NYC8 613 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 CABP7Q86V35 215 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 SP8Q8IXZ3 490 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 SEPT12Q8IYM1 358 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 RASSF8Q8NHQ8 419 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 UBXN4Q92575 508 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 CCDC47Q96A33 483 aaKnown RBP7.36□□□□□ -1.23
PTPRO-208ENST00000542557 DHTKD1Q96HY7 919 aaPredicted RBP7.36□□□□□ -1.23
PTPRO-208ENST00000542557 WDR24Q96S15 920 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 DESI2Q9BSY9 194 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 COA1Q9GZY4 146 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 MRPL44Q9H9J2 332 aaKnown RBP7.36□□□□□ -1.23
PTPRO-208ENST00000542557 ABHD10Q9NUJ1 306 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 TTF2Q9UNY4 1162 aaKnown RBP7.36□□□□□ -1.23
PTPRO-208ENST00000542557 LGALS16A8MUM7 142 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 HOXA7P31268 230 aaPredicted RBP7.36□□□□□ -1.23
PTPRO-208ENST00000542557 TUBB2AQ13885 445 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 MTF1Q14872 753 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 UTP14CQ5TAP6 766 aaKnown RBP7.36□□□□□ -1.23
PTPRO-208ENST00000542557 USP17L2Q6R6M4 530 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 IRF2BP1Q8IU81 584 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 REXO1Q8N1G1 1221 aaKnown RBP7.36□□□□□ -1.23
PTPRO-208ENST00000542557 TUBB2BQ9BVA1 445 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 MTMR4Q9NYA4 1195 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 TAB2Q9NYJ8 693 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 TRPC5Q9UL62 973 aaPredicted RBP7.36□□□□□ -1.23
PTPRO-208ENST00000542557 AFF2P51816 1311 aa7.36□□□□□ -1.23
PTPRO-208ENST00000542557 SPDYE4A6NLX3 237 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 PPEF1O14829 653 aaPredicted RBP7.35□□□□□ -1.23
PTPRO-208ENST00000542557 CCNT1O60563 726 aaKnown RBP7.35□□□□□ -1.23
PTPRO-208ENST00000542557 PLCG1P19174 1290 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 TXNRD1Q16881 649 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 LETM2Q2VYF4 491 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 ARHGAP29Q52LW3 1261 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 C7orf25Q9BPX7 421 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 CARD6Q9BX69 1037 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 TRIM9Q9C026 710 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 ARGLU1Q9NWB6 273 aaPredicted RBP7.35□□□□□ -1.23
PTPRO-208ENST00000542557 SWAP70Q9UH65 585 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 BICDL2A1A5D9 508 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 KIF5CO60282 957 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 ZSCAN20P17040 1043 aaPredicted RBP7.35□□□□□ -1.23
PTPRO-208ENST00000542557 AMPD3Q01432 767 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 PPP2R3AQ06190 1150 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 TTI2Q6NXR4 508 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 CYP26C1Q6V0L0 522 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 KRT222Q8N1A0 295 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 LRRC15Q8TF66 581 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 SPOCK2Q92563 424 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 PIGSQ96S52 555 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 VPS16Q9H269 839 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 MYO1AQ9UBC5 1043 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 ATP6V0A2Q9Y487 856 aa7.35□□□□□ -1.23
PTPRO-208ENST00000542557 USP17L5A8MUK1 530 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 C6orf229H3BNL8 230 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 CCNE1P24864 410 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 FXR2P51116 673 aaKnown RBP eCLIP7.34□□□□□ -1.23
PTPRO-208ENST00000542557 ERVK-24P63145 666 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 GABPB1Q06547 395 aaPredicted RBP7.34□□□□□ -1.23
PTPRO-208ENST00000542557 MEX3CQ5U5Q3 659 aaKnown RBP7.34□□□□□ -1.23
PTPRO-208ENST00000542557 MB21D1Q8N884 522 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 ZNF507Q8TCN5 953 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 TBCKQ8TEA7 893 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 CPLX3Q8WVH0 158 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 TRIM47Q96LD4 638 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 MTMR9Q96QG7 549 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 CPVLQ9H3G5 476 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 ZNF446Q9NWS9 450 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 STK17AQ9UEE5 414 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 TRIM49BA6NDI0 452 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 CLCN6P51797 869 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 ADCY7P51828 1080 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 PMS1P54277 932 aaKnown RBP7.34□□□□□ -1.23
PTPRO-208ENST00000542557 GTF2IP78347 998 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 UBXN1Q04323 297 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 DMTNQ08495 405 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 RSRC2Q7L4I2 434 aaKnown RBP7.34□□□□□ -1.23
PTPRO-208ENST00000542557 FAM114A1Q8IWE2 563 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 GPR161Q8N6U8 529 aaKnown RBP7.34□□□□□ -1.23
PTPRO-208ENST00000542557 CALML4Q96GE6 196 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 NUP88Q99567 741 aaPredicted RBP7.34□□□□□ -1.23
PTPRO-208ENST00000542557 DNAJC7Q99615 494 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 MMTAG2Q9BU76 263 aaKnown RBP7.34□□□□□ -1.23
PTPRO-208ENST00000542557 EXOC1Q9NV70 894 aa7.34□□□□□ -1.23
PTPRO-208ENST00000542557 MAGEC2Q9UBF1 373 aaPredicted RBP7.34□□□□□ -1.23
PTPRO-208ENST00000542557 ATP8B1O43520 1251 aa7.34□□□□□ -1.24
PTPRO-208ENST00000542557 TTLL1O95922 423 aa7.34□□□□□ -1.24
PTPRO-208ENST00000542557 KRT9P35527 623 aa7.34□□□□□ -1.24
PTPRO-208ENST00000542557 DNM2P50570 870 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms