RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ITIH6Q6UXX5 1313 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 SHTN1A0MZ66 631 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 SEMA3EO15041 775 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 UFL1O94874 794 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 GYPCP04921 128 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 TSPY3P0CV98 308 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 TSPY8P0CW00 308 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 FECHP22830 423 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 PTPREP23469 700 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 NF2P35240 595 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 TBC1D8BQ0IIM8 1120 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 TCP10Q12799 353 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 E2F5Q15329 346 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 APTXQ7Z2E3 356 aaKnown RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 COG1Q8WTW3 980 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 XAGE2Q96GT9 111 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 UIMC1Q96RL1 719 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 CRNKL1Q9BZJ0 848 aaKnown RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 RNF41Q9H4P4 317 aaPredicted RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 CCDC87Q9NVE4 849 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 CAPN7Q9Y6W3 813 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 MYH13Q9UKX3 1938 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 DDX60LQ5H9U9 1706 aaKnown RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 MAST2Q6P0Q8 1798 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 GOLGA6CA6NDK9 693 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 SH2B2O14492 632 aaPredicted RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 PPP1R12BO60237 982 aaPredicted RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 SHOX2O60902 331 aaPredicted RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 PRDM1O75626 825 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 GOLGA6DP0CG33 693 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 ARID4AP29374 1257 aaPredicted RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 ARHGAP25P42331 645 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 FXR1P51114 621 aaKnown RBP eCLIP5.82□□□□□ -1.48
PROM1-220ENST00000540805 ERVK-24P63145 666 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 CKAP4Q07065 602 aaKnown RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 TRIM14Q14142 442 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 TCERG1LQ5VWI1 586 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 APOA5Q6Q788 366 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 NOSTRINQ8IVI9 506 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 APPBP2Q92624 585 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 SLF1Q9BQI6 1058 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 ZNHIT6Q9NWK9 470 aaKnown RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 GOLGA6AQ9NYA3 693 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 FBXO2Q9UK22 296 aaPredicted RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 FAM169AQ9Y6X4 670 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 ANKRD31Q8N7Z5 1873 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 MACROD2A1Z1Q3 448 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 TARSL2A2RTX5 802 aaKnown RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 SNAP23O00161 211 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 ZBTB43O43298 467 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 ACTN4O43707 911 aaKnown RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 MYCP01106 439 aaPredicted RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 GGCXP38435 758 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 SETQ01105 290 aaPredicted RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 GRIN1Q05586 938 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 SSRP1Q08945 709 aaKnown RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 PPFIA1Q13136 1202 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 CDKAL1Q5VV42 579 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 GBP6Q6ZN66 633 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 TRAPPC11Q7Z392 1133 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 CEP57Q86XR8 500 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 PARD3BQ8TEW8 1205 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 WASF1Q92558 559 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 RPGRIP1Q96KN7 1286 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 NUP88Q99567 741 aaPredicted RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 ZKSCAN3Q9BRR0 538 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 ABHD10Q9NUJ1 306 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 IRAK4Q9NWZ3 460 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 PKD2L1Q9P0L9 805 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 SAP30BPQ9UHR5 308 aaKnown RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 GUCA1BQ9UMX6 200 aa5.82□□□□□ -1.48
PROM1-220ENST00000540805 ATF5Q9Y2D1 282 aaPredicted RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.82□□□□□ -1.48
PROM1-220ENST00000540805 ENO4A6NNW6 628 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 PDHBP11177 359 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 RILPL1Q5EBL4 403 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 ZNF579Q8NAF0 562 aaKnown RBP5.81□□□□□ -1.48
PROM1-220ENST00000540805 PUS7LQ9H0K6 701 aaKnown RBP5.81□□□□□ -1.48
PROM1-220ENST00000540805 SEC31BQ9NQW1 1179 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 CEP131Q9UPN4 1083 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 CNTNAP4Q9C0A0 1308 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 STK36Q9NRP7 1315 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 LAMB1P07942 1786 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 GPAA1O43292 621 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 PDE8AO60658 829 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 INPP5BP32019 993 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 CCT6AP40227 531 aaKnown RBP5.81□□□□□ -1.48
PROM1-220ENST00000540805 CUL4BQ13620 913 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 DIS3L2Q8IYB7 885 aaKnown RBP5.81□□□□□ -1.48
PROM1-220ENST00000540805 SPATA20Q8TB22 786 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 ZNF384Q8TF68 577 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 ZKSCAN4Q969J2 545 aaPredicted RBP5.81□□□□□ -1.48
PROM1-220ENST00000540805 TCHPQ9BT92 498 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 SELENOOQ9BVL4 669 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 MMRN2Q9H8L6 949 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 KIF9Q9HAQ2 790 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 ZBTB21Q9ULJ3 1066 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 SAR1BQ9Y6B6 198 aa5.81□□□□□ -1.48
PROM1-220ENST00000540805 ZC3H4Q9UPT8 1303 aaKnown RBP5.81□□□□□ -1.48
PROM1-220ENST00000540805 GOLGA6BA6NDN3 693 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms