RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 HPS3Q969F9 1004 aa12.97□□□□□ -0.33
C11orf54-214ENST00000540113 MXD3Q9BW11 206 aa12.97□□□□□ -0.33
C11orf54-214ENST00000540113 SPZ1Q9BXG8 430 aa12.97□□□□□ -0.33
C11orf54-214ENST00000540113 KLRC4O43908 158 aa12.97□□□□□ -0.33
C11orf54-214ENST00000540113 PARP1P09874 1014 aaKnown RBP12.97□□□□□ -0.33
C11orf54-214ENST00000540113 TECP42680 631 aa12.97□□□□□ -0.33
C11orf54-214ENST00000540113 NOVP48745 357 aa12.97□□□□□ -0.33
C11orf54-214ENST00000540113 PPP2R3AQ06190 1150 aa12.97□□□□□ -0.33
C11orf54-214ENST00000540113 CT47A1Q5JQC4 288 aaPredicted RBP12.97□□□□□ -0.33
C11orf54-214ENST00000540113 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
C11orf54-214ENST00000540113 ZNF287Q9HBT7 754 aa12.97□□□□□ -0.33
C11orf54-214ENST00000540113 MRFAP1Q9Y605 127 aa12.97□□□□□ -0.33
C11orf54-214ENST00000540113 PLCG1P19174 1290 aa12.96□□□□□ -0.33
C11orf54-214ENST00000540113 ZNF569Q5MCW4 686 aa12.96□□□□□ -0.33
C11orf54-214ENST00000540113 TMC4Q7Z404 712 aa12.96□□□□□ -0.33
C11orf54-214ENST00000540113 COL23A1Q86Y22 540 aaPredicted RBP12.96□□□□□ -0.33
C11orf54-214ENST00000540113 SLF2Q8IX21 1173 aa12.96□□□□□ -0.33
C11orf54-214ENST00000540113 ADSSL1Q8N142 457 aa12.96□□□□□ -0.33
C11orf54-214ENST00000540113 LRRC47Q8N1G4 583 aaKnown RBP12.96□□□□□ -0.33
C11orf54-214ENST00000540113 CCDC148Q8NFR7 591 aa12.96□□□□□ -0.33
C11orf54-214ENST00000540113 COA7Q96BR5 231 aa12.96□□□□□ -0.33
C11orf54-214ENST00000540113 UIMC1Q96RL1 719 aa12.96□□□□□ -0.33
C11orf54-214ENST00000540113 CHP1Q99653 195 aa12.96□□□□□ -0.33
C11orf54-214ENST00000540113 SRRTQ9BXP5 876 aaKnown RBP12.96□□□□□ -0.33
C11orf54-214ENST00000540113 DDX4Q9NQI0 724 aaKnown RBP12.96□□□□□ -0.33
C11orf54-214ENST00000540113 TFR2Q9UP52 801 aa12.96□□□□□ -0.33
C11orf54-214ENST00000540113 NKRFO15226 690 aaKnown RBP eCLIP12.96□□□□□ -0.34
C11orf54-214ENST00000540113 SRGNP10124 158 aa12.96□□□□□ -0.34
C11orf54-214ENST00000540113 SLF1Q9BQI6 1058 aa12.96□□□□□ -0.34
C11orf54-214ENST00000540113 LZTS2Q9BRK4 669 aa12.96□□□□□ -0.34
C11orf54-214ENST00000540113 COA1Q9GZY4 146 aa12.96□□□□□ -0.34
C11orf54-214ENST00000540113 ABHD10Q9NUJ1 306 aa12.96□□□□□ -0.34
C11orf54-214ENST00000540113 RMND1Q9NWS8 449 aa12.96□□□□□ -0.34
C11orf54-214ENST00000540113 PUF60Q9UHX1 559 aaKnown RBP12.96□□□□□ -0.34
C11orf54-214ENST00000540113 PLIN4Q96Q06 1357 aa12.95□□□□□ -0.34
C11orf54-214ENST00000540113 GOLGA6L9A6NEM1 432 aa12.95□□□□□ -0.34
C11orf54-214ENST00000540113 GABPAQ06546 454 aa12.95□□□□□ -0.34
C11orf54-214ENST00000540113 CABP7Q86V35 215 aa12.95□□□□□ -0.34
C11orf54-214ENST00000540113 KRT222Q8N1A0 295 aa12.95□□□□□ -0.34
C11orf54-214ENST00000540113 TBCKQ8TEA7 893 aa12.95□□□□□ -0.34
C11orf54-214ENST00000540113 TRIM10Q9UDY6 481 aa12.95□□□□□ -0.34
C11orf54-214ENST00000540113 FHOD1Q9Y613 1164 aa12.95□□□□□ -0.34
C11orf54-214ENST00000540113 EFCAB8A8MWE9 144 aa12.94□□□□□ -0.34
C11orf54-214ENST00000540113 FCER1AP12319 257 aa12.94□□□□□ -0.34
C11orf54-214ENST00000540113 KRT9P35527 623 aa12.94□□□□□ -0.34
C11orf54-214ENST00000540113 KLK7P49862 253 aa12.94□□□□□ -0.34
C11orf54-214ENST00000540113 POTEDQ86YR6 584 aa12.94□□□□□ -0.34
C11orf54-214ENST00000540113 CNGA4Q8IV77 575 aa12.94□□□□□ -0.34
C11orf54-214ENST00000540113 FLAD1Q8NFF5 587 aa12.94□□□□□ -0.34
C11orf54-214ENST00000540113 RRP36Q96EU6 259 aaKnown RBP12.94□□□□□ -0.34
C11orf54-214ENST00000540113 TRIM47Q96LD4 638 aa12.94□□□□□ -0.34
C11orf54-214ENST00000540113 ZMYND12Q9H0C1 365 aa12.94□□□□□ -0.34
C11orf54-214ENST00000540113 GPCPD1Q9NPB8 672 aa12.94□□□□□ -0.34
C11orf54-214ENST00000540113 LRRC10BA6NIK2 292 aa12.94□□□□□ -0.34
C11orf54-214ENST00000540113 TXKP42681 527 aa12.94□□□□□ -0.34
C11orf54-214ENST00000540113 NONOQ15233 471 aaKnown RBP eCLIP12.94□□□□□ -0.34
C11orf54-214ENST00000540113 DOK7Q18PE1 504 aa12.94□□□□□ -0.34
C11orf54-214ENST00000540113 GALNT17Q6IS24 598 aa12.94□□□□□ -0.34
C11orf54-214ENST00000540113 SLC35F6Q8N357 371 aa12.94□□□□□ -0.34
C11orf54-214ENST00000540113 GJA10Q969M2 543 aa12.94□□□□□ -0.34
C11orf54-214ENST00000540113 PYM1Q9BRP8 204 aaKnown RBP12.94□□□□□ -0.34
C11orf54-214ENST00000540113 IGKV6D-41A0A0C4DH26 115 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 TTC26A0AVF1 554 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 OR52Z1P0C646 297 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 AKR1B1P15121 316 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 NPR1P16066 1061 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 STK4Q13043 487 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 GPIHBP1Q8IV16 184 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 KBTBD4Q9NVX7 518 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 FAM53CQ9NYF3 392 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 SEC63Q9UGP8 760 aaKnown RBP12.93□□□□□ -0.34
C11orf54-214ENST00000540113 GREB1LQ9C091 1923 aaPredicted RBP12.93□□□□□ -0.34
C11orf54-214ENST00000540113 ZNF646O15015 1829 aaPredicted RBP12.93□□□□□ -0.34
C11orf54-214ENST00000540113 B4DLN1 442 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 TPM1P09493 284 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 PNMA6AP0CW24 399 aaPredicted RBP12.93□□□□□ -0.34
C11orf54-214ENST00000540113 ERCC3P19447 782 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 SCNN1DP51172 638 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 PDE4DQ08499 809 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 SOGA3Q5TF21 947 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 ANKRD20A12PQ8NF67 263 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 NAA15Q9BXJ9 866 aaKnown RBP12.93□□□□□ -0.34
C11orf54-214ENST00000540113 CCSER1Q9C0I3 900 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 C6orf50Q9HD87 102 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 TTF2Q9UNY4 1162 aaKnown RBP12.93□□□□□ -0.34
C11orf54-214ENST00000540113 ITIH6Q6UXX5 1313 aa12.93□□□□□ -0.34
C11orf54-214ENST00000540113 H7C1D1 291 aa12.92□□□□□ -0.34
C11orf54-214ENST00000540113 KIF5CO60282 957 aa12.92□□□□□ -0.34
C11orf54-214ENST00000540113 PDHBP11177 359 aa12.92□□□□□ -0.34
C11orf54-214ENST00000540113 ASIC1P78348 528 aa12.92□□□□□ -0.34
C11orf54-214ENST00000540113 DPP8Q6V1X1 898 aaPredicted RBP12.92□□□□□ -0.34
C11orf54-214ENST00000540113 NEK8Q86SG6 692 aa12.92□□□□□ -0.34
C11orf54-214ENST00000540113 NLGN1Q8N2Q7 840 aa12.92□□□□□ -0.34
C11orf54-214ENST00000540113 MB21D1Q8N884 522 aa12.92□□□□□ -0.34
C11orf54-214ENST00000540113 DUSP9Q99956 384 aaKnown RBP12.92□□□□□ -0.34
C11orf54-214ENST00000540113 MMTAG2Q9BU76 263 aaKnown RBP12.92□□□□□ -0.34
C11orf54-214ENST00000540113 MTMR4Q9NYA4 1195 aa12.92□□□□□ -0.34
C11orf54-214ENST00000540113 SIPA1L1O43166 1804 aa12.92□□□□□ -0.34
C11orf54-214ENST00000540113 TDP2O95551 362 aa12.92□□□□□ -0.34
C11orf54-214ENST00000540113 MYCNP04198 464 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms