RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 CYP2D6P10635 497 aa14.38□□□□□ -0.11
MSH6-210ENST00000540021 ZBED6P86452 979 aa14.38□□□□□ -0.11
MSH6-210ENST00000540021 P2RX5Q93086 422 aa14.38□□□□□ -0.11
MSH6-210ENST00000540021 DISC1Q9NRI5 854 aa14.38□□□□□ -0.11
MSH6-210ENST00000540021 RIMBP3CA6NJZ7 1639 aa14.38□□□□□ -0.11
MSH6-210ENST00000540021 RIMBP3BA6NNM3 1639 aa14.38□□□□□ -0.11
MSH6-210ENST00000540021 RIMBP3Q9UFD9 1639 aa14.38□□□□□ -0.11
MSH6-210ENST00000540021 TCP1P17987 556 aaKnown RBP14.37□□□□□ -0.11
MSH6-210ENST00000540021 PLCG1P19174 1290 aa14.37□□□□□ -0.11
MSH6-210ENST00000540021 LONP1P36776 959 aaKnown RBP14.37□□□□□ -0.11
MSH6-210ENST00000540021 KIF11P52732 1056 aa14.37□□□□□ -0.11
MSH6-210ENST00000540021 KRT79Q5XKE5 535 aa14.37□□□□□ -0.11
MSH6-210ENST00000540021 TMC4Q7Z404 712 aa14.37□□□□□ -0.11
MSH6-210ENST00000540021 ADAT2Q7Z6V5 191 aaKnown RBP14.37□□□□□ -0.11
MSH6-210ENST00000540021 CABS1Q96KC9 395 aa14.37□□□□□ -0.11
MSH6-210ENST00000540021 C6orf50Q9HD87 102 aa14.37□□□□□ -0.11
MSH6-210ENST00000540021 TULP2O00295 520 aa14.37□□□□□ -0.11
MSH6-210ENST00000540021 KCNK3O14649 394 aa14.37□□□□□ -0.11
MSH6-210ENST00000540021 SLC9C1Q4G0N8 1177 aa14.37□□□□□ -0.11
MSH6-210ENST00000540021 DCAF17Q5H9S7 520 aaPredicted RBP14.37□□□□□ -0.11
MSH6-210ENST00000540021 PACS2Q86VP3 889 aa14.37□□□□□ -0.11
MSH6-210ENST00000540021 RRP36Q96EU6 259 aaKnown RBP14.37□□□□□ -0.11
MSH6-210ENST00000540021 LIMA1Q9UHB6 759 aaKnown RBP14.37□□□□□ -0.11
MSH6-210ENST00000540021 PACSIN2Q9UNF0 486 aaPredicted RBP14.37□□□□□ -0.11
MSH6-210ENST00000540021 PCDHA13Q9Y5I0 950 aa14.37□□□□□ -0.11
MSH6-210ENST00000540021 KDM6AO15550 1401 aaPredicted RBP14.37□□□□□ -0.11
MSH6-210ENST00000540021 PLEKP08567 350 aaPredicted RBP14.37□□□□□ -0.11
MSH6-210ENST00000540021 TNNC1P63316 161 aa14.37□□□□□ -0.11
MSH6-210ENST00000540021 PAXIP1Q6ZW49 1069 aaPredicted RBP14.37□□□□□ -0.11
MSH6-210ENST00000540021 KANSL2Q9H9L4 492 aa14.37□□□□□ -0.11
MSH6-210ENST00000540021 XDHP47989 1333 aa14.37□□□□□ -0.11
MSH6-210ENST00000540021 LOC102724159A0A0B4J2E5 919 aa14.36□□□□□ -0.11
MSH6-210ENST00000540021 KRT14P02533 472 aa14.36□□□□□ -0.11
MSH6-210ENST00000540021 SARSP49591 514 aaKnown RBP14.36□□□□□ -0.11
MSH6-210ENST00000540021 GNAQP50148 359 aa14.36□□□□□ -0.11
MSH6-210ENST00000540021 POLR2FP61218 127 aaKnown RBP14.36□□□□□ -0.11
MSH6-210ENST00000540021 PWP2Q15269 919 aaKnown RBP14.36□□□□□ -0.11
MSH6-210ENST00000540021 PIGBQ92521 554 aa14.36□□□□□ -0.11
MSH6-210ENST00000540021 SLIT1O75093 1534 aa14.36□□□□□ -0.11
MSH6-210ENST00000540021 FCER1AP12319 257 aa14.36□□□□□ -0.11
MSH6-210ENST00000540021 EPHB4P54760 987 aa14.36□□□□□ -0.11
MSH6-210ENST00000540021 ZFYVE27Q5T4F4 411 aa14.36□□□□□ -0.11
MSH6-210ENST00000540021 PROCA1Q8NCQ7 364 aaPredicted RBP14.36□□□□□ -0.11
MSH6-210ENST00000540021 SNX29Q8TEQ0 813 aa14.36□□□□□ -0.11
MSH6-210ENST00000540021 MS4A14Q96JA4 679 aa14.36□□□□□ -0.11
MSH6-210ENST00000540021 FAM53CQ9NYF3 392 aa14.36□□□□□ -0.11
MSH6-210ENST00000540021 CACNA1FO60840 1977 aa14.36□□□□□ -0.11
MSH6-210ENST00000540021 BACH1O14867 736 aa14.36□□□□□ -0.11
MSH6-210ENST00000540021 KLHL30Q0D2K2 578 aa14.36□□□□□ -0.11
MSH6-210ENST00000540021 KIAA0753Q2KHM9 967 aa14.36□□□□□ -0.11
MSH6-210ENST00000540021 NAA35Q5VZE5 725 aa14.36□□□□□ -0.11
MSH6-210ENST00000540021 TMTC3Q6ZXV5 915 aa14.36□□□□□ -0.11
MSH6-210ENST00000540021 MYCBPQ99417 103 aaPredicted RBP14.36□□□□□ -0.11
MSH6-210ENST00000540021 GBP2P32456 591 aaPredicted RBP14.35□□□□□ -0.11
MSH6-210ENST00000540021 IRAK1P51617 712 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 CCNI2Q6ZMN8 369 aaPredicted RBP14.35□□□□□ -0.11
MSH6-210ENST00000540021 MMS22LQ6ZRQ5 1243 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 VPS36Q86VN1 386 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 SRBD1Q8N5C6 995 aaKnown RBP14.35□□□□□ -0.11
MSH6-210ENST00000540021 RAB21Q9UL25 225 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 ATP2C1P98194 919 aaPredicted RBP14.35□□□□□ -0.11
MSH6-210ENST00000540021 GUCY1A3Q02108 690 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 CACNB1Q02641 598 aaPredicted RBP14.35□□□□□ -0.11
MSH6-210ENST00000540021 NONOQ15233 471 aaKnown RBP eCLIP14.35□□□□□ -0.11
MSH6-210ENST00000540021 CDKAL1Q5VV42 579 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 UHMK1Q8TAS1 419 aaKnown RBP14.35□□□□□ -0.11
MSH6-210ENST00000540021 STIM2Q9P246 746 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 ZNF652Q9Y2D9 606 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 SMCO2A6NFE2 343 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 CTNNA1P35221 906 aaKnown RBP14.35□□□□□ -0.11
MSH6-210ENST00000540021 GFPT1Q06210 699 aaPredicted RBP14.35□□□□□ -0.11
MSH6-210ENST00000540021 CCDC84Q86UT8 332 aaPredicted RBP14.35□□□□□ -0.11
MSH6-210ENST00000540021 SPATA4Q8NEY3 305 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 DYNLL2Q96FJ2 89 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 LSM14BQ9BX40 385 aaKnown RBP14.35□□□□□ -0.11
MSH6-210ENST00000540021 DMGDHQ9UI17 866 aaKnown RBP14.35□□□□□ -0.11
MSH6-210ENST00000540021 FRMD3A2A2Y4 597 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 GCOM1H8Y6P7 765 aaPredicted RBP14.35□□□□□ -0.11
MSH6-210ENST00000540021 MYZAPP0CAP1 466 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 KRT13P13646 458 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 CORO7P57737 925 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 SFMBT2Q5VUG0 894 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 ARFGAP2Q8N6H7 521 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 MED15Q96RN5 788 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 PHF20Q9BVI0 1012 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 DPH5Q9H2P9 285 aa14.35□□□□□ -0.11
MSH6-210ENST00000540021 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.35□□□□□ -0.11
MSH6-210ENST00000540021 WNT7AO00755 349 aa14.34□□□□□ -0.11
MSH6-210ENST00000540021 ALX1Q15699 326 aa14.34□□□□□ -0.11
MSH6-210ENST00000540021 KCTD19Q17RG1 926 aaPredicted RBP14.34□□□□□ -0.11
MSH6-210ENST00000540021 KRT71Q3SY84 523 aa14.34□□□□□ -0.11
MSH6-210ENST00000540021 MAPKAPK5Q8IW41 473 aa14.34□□□□□ -0.11
MSH6-210ENST00000540021 FBXL16Q8N461 479 aa14.34□□□□□ -0.11
MSH6-210ENST00000540021 HDAC7Q8WUI4 952 aa14.34□□□□□ -0.11
MSH6-210ENST00000540021 BTG4Q9NY30 223 aa14.34□□□□□ -0.11
MSH6-210ENST00000540021 ADAMTS2O95450 1211 aa14.34□□□□□ -0.11
MSH6-210ENST00000540021 OR52Z1P0C646 297 aa14.34□□□□□ -0.11
MSH6-210ENST00000540021 CCNE1P24864 410 aa14.34□□□□□ -0.11
MSH6-210ENST00000540021 OSBPL9Q96SU4 736 aa14.34□□□□□ -0.11
MSH6-210ENST00000540021 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms