RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 ASGR1P07306 291 aa16.5■□□□□ 0.23
CCND1-204ENST00000539241 HSPD1P10809 573 aaKnown RBP16.5■□□□□ 0.23
CCND1-204ENST00000539241 PDE4AP27815 886 aa16.5■□□□□ 0.23
CCND1-204ENST00000539241 EPHB4P54760 987 aa16.5■□□□□ 0.23
CCND1-204ENST00000539241 GNASQ5JWF2 1037 aa16.5■□□□□ 0.23
CCND1-204ENST00000539241 ZNF589Q86UQ0 364 aaPredicted RBP16.5■□□□□ 0.23
CCND1-204ENST00000539241 PLEKHM2Q8IWE5 1019 aa16.5■□□□□ 0.23
CCND1-204ENST00000539241 VTI1AQ96AJ9 217 aa16.5■□□□□ 0.23
CCND1-204ENST00000539241 OSBPL3Q9H4L5 887 aa16.5■□□□□ 0.23
CCND1-204ENST00000539241 CCPG1Q9ULG6 757 aa16.5■□□□□ 0.23
CCND1-204ENST00000539241 MROH7Q68CQ1 1323 aa16.49■□□□□ 0.23
CCND1-204ENST00000539241 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.49■□□□□ 0.23
CCND1-204ENST00000539241 TRIM6-TRIM34B2RNG4 842 aa16.49■□□□□ 0.23
CCND1-204ENST00000539241 SMAD3P84022 425 aaKnown RBP16.49■□□□□ 0.23
CCND1-204ENST00000539241 TNFAIP2Q03169 654 aa16.49■□□□□ 0.23
CCND1-204ENST00000539241 FPGSQ05932 587 aa16.49■□□□□ 0.23
CCND1-204ENST00000539241 NMIQ13287 307 aaPredicted RBP16.49■□□□□ 0.23
CCND1-204ENST00000539241 MUM1L1Q5H9M0 696 aa16.49■□□□□ 0.23
CCND1-204ENST00000539241 TTBK2Q6IQ55 1244 aa16.49■□□□□ 0.23
CCND1-204ENST00000539241 NOL8Q76FK4 1167 aaKnown RBP16.49■□□□□ 0.23
CCND1-204ENST00000539241 RNPC3Q96LT9 517 aaKnown RBP16.49■□□□□ 0.23
CCND1-204ENST00000539241 CYP39A1Q9NYL5 469 aa16.49■□□□□ 0.23
CCND1-204ENST00000539241 ZMYM6O95789 1325 aa16.48■□□□□ 0.23
CCND1-204ENST00000539241 CCDC171Q6TFL3 1326 aa16.48■□□□□ 0.23
CCND1-204ENST00000539241 A0A0U1RQG5 324 aaPredicted RBP16.48■□□□□ 0.23
CCND1-204ENST00000539241 ARVCFO00192 962 aa16.48■□□□□ 0.23
CCND1-204ENST00000539241 CTAGE5O15320 804 aa16.48■□□□□ 0.23
CCND1-204ENST00000539241 ICAM1P05362 532 aa16.48■□□□□ 0.23
CCND1-204ENST00000539241 TOP1P11387 765 aaKnown RBP16.48■□□□□ 0.23
CCND1-204ENST00000539241 SLC16A2P36021 539 aa16.48■□□□□ 0.23
CCND1-204ENST00000539241 CDK7P50613 346 aa16.48■□□□□ 0.23
CCND1-204ENST00000539241 HAND2P61296 217 aa16.48■□□□□ 0.23
CCND1-204ENST00000539241 NKX3-2P78367 333 aa16.48■□□□□ 0.23
CCND1-204ENST00000539241 SYDE2Q5VT97 1194 aa16.48■□□□□ 0.23
CCND1-204ENST00000539241 BTNL9Q6UXG8 535 aa16.48■□□□□ 0.23
CCND1-204ENST00000539241 NSMFQ6X4W1 530 aa16.48■□□□□ 0.23
CCND1-204ENST00000539241 RILPL2Q969X0 211 aa16.48■□□□□ 0.23
CCND1-204ENST00000539241 TMEM47Q9BQJ4 181 aa16.48■□□□□ 0.23
CCND1-204ENST00000539241 RANBP17Q9H2T7 1088 aaKnown RBP16.48■□□□□ 0.23
CCND1-204ENST00000539241 TCP11L1Q9NUJ3 509 aa16.48■□□□□ 0.23
CCND1-204ENST00000539241 TBX21Q9UL17 535 aa16.48■□□□□ 0.23
CCND1-204ENST00000539241 ASTN1O14525 1302 aa16.47■□□□□ 0.23
CCND1-204ENST00000539241 TIMP1P01033 207 aa16.47■□□□□ 0.23
CCND1-204ENST00000539241 BEX3Q00994 111 aa16.47■□□□□ 0.23
CCND1-204ENST00000539241 TLK2Q86UE8 772 aa16.47■□□□□ 0.23
CCND1-204ENST00000539241 SEMA6BQ9H3T3 888 aa16.47■□□□□ 0.23
CCND1-204ENST00000539241 GNEQ9Y223 722 aaKnown RBP16.47■□□□□ 0.23
CCND1-204ENST00000539241 DDX49Q9Y6V7 483 aaKnown RBP16.47■□□□□ 0.23
CCND1-204ENST00000539241 FRMPD2Q68DX3 1309 aaPredicted RBP16.46■□□□□ 0.23
CCND1-204ENST00000539241 EEPD1Q7L9B9 569 aa16.46■□□□□ 0.23
CCND1-204ENST00000539241 FBXO16Q8IX29 292 aaPredicted RBP16.46■□□□□ 0.23
CCND1-204ENST00000539241 GPCPD1Q9NPB8 672 aa16.46■□□□□ 0.23
CCND1-204ENST00000539241 TLR3O15455 904 aaKnown RBP16.45■□□□□ 0.22
CCND1-204ENST00000539241 DYNC1LI2O43237 492 aaPredicted RBP16.45■□□□□ 0.22
CCND1-204ENST00000539241 PDHBP11177 359 aa16.45■□□□□ 0.22
CCND1-204ENST00000539241 PCP11498 1178 aaKnown RBP16.45■□□□□ 0.22
CCND1-204ENST00000539241 SMPD1P17405 629 aa16.45■□□□□ 0.22
CCND1-204ENST00000539241 MFAP1P55081 439 aaKnown RBP16.45■□□□□ 0.22
CCND1-204ENST00000539241 AKNAD1Q5T1N1 836 aa16.45■□□□□ 0.22
CCND1-204ENST00000539241 MFSD5Q6N075 450 aa16.45■□□□□ 0.22
CCND1-204ENST00000539241 TAPT1Q6NXT6 567 aa16.45■□□□□ 0.22
CCND1-204ENST00000539241 MFSD6Q6ZSS7 791 aa16.45■□□□□ 0.22
CCND1-204ENST00000539241 TBC1D10CQ8IV04 446 aa16.45■□□□□ 0.22
CCND1-204ENST00000539241 FAM126BQ8IXS8 530 aa16.45■□□□□ 0.22
CCND1-204ENST00000539241 PURBQ96QR8 312 aaKnown RBP16.45■□□□□ 0.22
CCND1-204ENST00000539241 CDX2Q99626 313 aaPredicted RBP16.45■□□□□ 0.22
CCND1-204ENST00000539241 AP5M1Q9H0R1 490 aa16.45■□□□□ 0.22
CCND1-204ENST00000539241 TTYH1Q9H313 450 aaPredicted RBP16.45■□□□□ 0.22
CCND1-204ENST00000539241 PDGFCQ9NRA1 345 aa16.45■□□□□ 0.22
CCND1-204ENST00000539241 NFIBO00712 420 aa16.44■□□□□ 0.22
CCND1-204ENST00000539241 ZEB2O60315 1214 aa16.44■□□□□ 0.22
CCND1-204ENST00000539241 CABYRO75952 493 aa16.44■□□□□ 0.22
CCND1-204ENST00000539241 SDSP20132 328 aa16.44■□□□□ 0.22
CCND1-204ENST00000539241 PTGS1P23219 599 aa16.44■□□□□ 0.22
CCND1-204ENST00000539241 PPIGQ13427 754 aaKnown RBP eCLIP16.44■□□□□ 0.22
CCND1-204ENST00000539241 BAATQ14032 418 aaPredicted RBP16.44■□□□□ 0.22
CCND1-204ENST00000539241 FSCN1Q16658 493 aaKnown RBP16.44■□□□□ 0.22
CCND1-204ENST00000539241 IQSEC1Q6DN90 963 aa16.44■□□□□ 0.22
CCND1-204ENST00000539241 CXCL17Q6UXB2 119 aa16.44■□□□□ 0.22
CCND1-204ENST00000539241 MORC4Q8TE76 937 aa16.44■□□□□ 0.22
CCND1-204ENST00000539241 TTC14Q96N46 770 aa16.44■□□□□ 0.22
CCND1-204ENST00000539241 RNF41Q9H4P4 317 aaPredicted RBP16.44■□□□□ 0.22
CCND1-204ENST00000539241 VTA1Q9NP79 307 aa16.44■□□□□ 0.22
CCND1-204ENST00000539241 UNC80Q8N2C7 3258 aa16.44■□□□□ 0.22
CCND1-204ENST00000539241 PTPDC1A2A3K4 754 aa16.43■□□□□ 0.22
CCND1-204ENST00000539241 ALDH5A1P51649 535 aaPredicted RBP16.43■□□□□ 0.22
CCND1-204ENST00000539241 ZNF543Q08ER8 600 aa16.43■□□□□ 0.22
CCND1-204ENST00000539241 KIAA1211Q6ZU35 1233 aa16.43■□□□□ 0.22
CCND1-204ENST00000539241 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.43■□□□□ 0.222e-6■■□□□ 11.5
CCND1-204ENST00000539241 PPP1R12CQ9BZL4 782 aa16.43■□□□□ 0.22
CCND1-204ENST00000539241 ADD3Q9UEY8 706 aaKnown RBP16.43■□□□□ 0.22
CCND1-204ENST00000539241 PNMA2Q9UL42 364 aa16.43■□□□□ 0.22
CCND1-204ENST00000539241 Q9Y3F1 56 aa16.43■□□□□ 0.22
CCND1-204ENST00000539241 MCM3APO60318 1980 aa16.43■□□□□ 0.22
CCND1-204ENST00000539241 TMEM265A0A087WTH1 108 aa16.42■□□□□ 0.22
CCND1-204ENST00000539241 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.42■□□□□ 0.22
CCND1-204ENST00000539241 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.42■□□□□ 0.22
CCND1-204ENST00000539241 CD4P01730 458 aa16.42■□□□□ 0.22
CCND1-204ENST00000539241 SNHG28P0DPA3 235 aa16.42■□□□□ 0.22
CCND1-204ENST00000539241 TMEM63BQ5T3F8 832 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms