RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 G3V3G9 751 aa20.16■□□□□ 0.82
GNE-204ENST00000539208 N4BP3O15049 544 aa20.16■□□□□ 0.82
GNE-204ENST00000539208 SCNN1DP51172 638 aa20.16■□□□□ 0.82
GNE-204ENST00000539208 DCAF8Q5TAQ9 597 aa20.16■□□□□ 0.82
GNE-204ENST00000539208 JAKMIP3Q5VZ66 844 aa20.16■□□□□ 0.82
GNE-204ENST00000539208 LRRC15Q8TF66 581 aa20.16■□□□□ 0.82
GNE-204ENST00000539208 CCDC17Q96LX7 622 aa20.16■□□□□ 0.82
GNE-204ENST00000539208 ZDHHC15Q96MV8 337 aa20.16■□□□□ 0.82
GNE-204ENST00000539208 MXD3Q9BW11 206 aa20.16■□□□□ 0.82
GNE-204ENST00000539208 MMP10P09238 476 aa20.15■□□□□ 0.82
GNE-204ENST00000539208 TRIM14Q14142 442 aa20.15■□□□□ 0.82
GNE-204ENST00000539208 GPATCH4Q5T3I0 446 aaKnown RBP20.15■□□□□ 0.82
GNE-204ENST00000539208 JMJD4Q9H9V9 463 aa20.15■□□□□ 0.82
GNE-204ENST00000539208 TPM1P09493 284 aa20.15■□□□□ 0.82
GNE-204ENST00000539208 FXR2P51116 673 aaKnown RBP eCLIP20.15■□□□□ 0.82
GNE-204ENST00000539208 IRF2BP1Q8IU81 584 aa20.15■□□□□ 0.82
GNE-204ENST00000539208 NOC3LQ8WTT2 800 aaKnown RBP20.15■□□□□ 0.82
GNE-204ENST00000539208 CCDC47Q96A33 483 aaKnown RBP20.15■□□□□ 0.82
GNE-204ENST00000539208 DHTKD1Q96HY7 919 aaPredicted RBP20.15■□□□□ 0.82
GNE-204ENST00000539208 SRRTQ9BXP5 876 aaKnown RBP20.15■□□□□ 0.82
GNE-204ENST00000539208 THAP9Q9H5L6 903 aa20.15■□□□□ 0.82
GNE-204ENST00000539208 RIC8AQ9NPQ8 531 aa20.15■□□□□ 0.82
GNE-204ENST00000539208 TMEM260Q9NX78 707 aa20.15■□□□□ 0.82
GNE-204ENST00000539208 PSMA7O14818 248 aa20.14■□□□□ 0.81
GNE-204ENST00000539208 COBLO75128 1261 aa20.14■□□□□ 0.81
GNE-204ENST00000539208 GYPCP04921 128 aa20.14■□□□□ 0.81
GNE-204ENST00000539208 EEF1GP26641 437 aaKnown RBP20.14■□□□□ 0.81
GNE-204ENST00000539208 CCT6AP40227 531 aaKnown RBP20.14■□□□□ 0.81
GNE-204ENST00000539208 PPP1R2P41236 205 aa20.14■□□□□ 0.81
GNE-204ENST00000539208 CRKP46108 304 aa20.14■□□□□ 0.81
GNE-204ENST00000539208 AMPD3Q01432 767 aa20.14■□□□□ 0.81
GNE-204ENST00000539208 ADGRF4Q8IZF3 695 aa20.14■□□□□ 0.81
GNE-204ENST00000539208 COA7Q96BR5 231 aa20.14■□□□□ 0.81
GNE-204ENST00000539208 MMTAG2Q9BU76 263 aaKnown RBP20.14■□□□□ 0.81
GNE-204ENST00000539208 TRIM9Q9C026 710 aa20.14■□□□□ 0.81
GNE-204ENST00000539208 EP400Q96L91 3159 aa20.14■□□□□ 0.81
GNE-204ENST00000539208 CASP14P31944 242 aa20.14■□□□□ 0.81
GNE-204ENST00000539208 TECP42680 631 aa20.14■□□□□ 0.81
GNE-204ENST00000539208 EIF6P56537 245 aaKnown RBP20.14■□□□□ 0.81
GNE-204ENST00000539208 HDLBPQ00341 1268 aaKnown RBP20.14■□□□□ 0.81
GNE-204ENST00000539208 COBLL1Q53SF7 1204 aa20.14■□□□□ 0.81
GNE-204ENST00000539208 MTMR8Q96EF0 704 aa20.14■□□□□ 0.81
GNE-204ENST00000539208 PLIN2Q99541 437 aa20.14■□□□□ 0.81
GNE-204ENST00000539208 GPCPD1Q9NPB8 672 aa20.14■□□□□ 0.81
GNE-204ENST00000539208 ADAMTSL1Q8N6G6 1762 aa20.13■□□□□ 0.81
GNE-204ENST00000539208 CCDC175P0C221 793 aa20.13■□□□□ 0.81
GNE-204ENST00000539208 PDIA5Q14554 519 aa20.13■□□□□ 0.81
GNE-204ENST00000539208 POTEDQ86YR6 584 aa20.13■□□□□ 0.81
GNE-204ENST00000539208 CALML4Q96GE6 196 aa20.13■□□□□ 0.81
GNE-204ENST00000539208 VPS16Q9H269 839 aa20.13■□□□□ 0.81
GNE-204ENST00000539208 DHX36Q9H2U1 1008 aaKnown RBP20.13■□□□□ 0.81
GNE-204ENST00000539208 MAPK8IP1Q9UQF2 711 aa20.13■□□□□ 0.81
GNE-204ENST00000539208 CLK2P49760 499 aaKnown RBP20.12■□□□□ 0.81
GNE-204ENST00000539208 CALCRLQ16602 461 aa20.12■□□□□ 0.81
GNE-204ENST00000539208 TAB2Q9NYJ8 693 aa20.12■□□□□ 0.81
GNE-204ENST00000539208 FANCGO15287 622 aa20.12■□□□□ 0.81
GNE-204ENST00000539208 EDIL3O43854 480 aa20.12■□□□□ 0.81
GNE-204ENST00000539208 NPM3O75607 178 aaKnown RBP20.12■□□□□ 0.81
GNE-204ENST00000539208 FXR1P51114 621 aaKnown RBP eCLIP20.12■□□□□ 0.81
GNE-204ENST00000539208 STRIP1Q5VSL9 837 aa20.12■□□□□ 0.81
GNE-204ENST00000539208 PPP4R3AQ6IN85 833 aa20.12■□□□□ 0.81
GNE-204ENST00000539208 TTI2Q6NXR4 508 aa20.12■□□□□ 0.81
GNE-204ENST00000539208 CLEC10AQ8IUN9 316 aa20.12■□□□□ 0.81
GNE-204ENST00000539208 CPLX3Q8WVH0 158 aa20.12■□□□□ 0.81
GNE-204ENST00000539208 STK17AQ9UEE5 414 aa20.12■□□□□ 0.81
GNE-204ENST00000539208 ADGRG1Q9Y653 693 aa20.12■□□□□ 0.81
GNE-204ENST00000539208 SOWAHDA6NJG2 315 aa20.11■□□□□ 0.81
GNE-204ENST00000539208 APBA3O96018 575 aa20.11■□□□□ 0.81
GNE-204ENST00000539208 NFIAQ12857 509 aa20.11■□□□□ 0.81
GNE-204ENST00000539208 TMEM266Q2M3C6 531 aa20.11■□□□□ 0.81
GNE-204ENST00000539208 STYK1Q6J9G0 422 aa20.11■□□□□ 0.81
GNE-204ENST00000539208 RAD9BQ6WBX8 426 aa20.11■□□□□ 0.81
GNE-204ENST00000539208 TMTC1Q8IUR5 882 aa20.11■□□□□ 0.81
GNE-204ENST00000539208 MKL1Q969V6 931 aa20.11■□□□□ 0.81
GNE-204ENST00000539208 FEZ1Q99689 392 aa20.11■□□□□ 0.81
GNE-204ENST00000539208 IDI2Q9BXS1 227 aa20.11■□□□□ 0.81
GNE-204ENST00000539208 RAB34Q9BZG1 259 aa20.11■□□□□ 0.81
GNE-204ENST00000539208 A0A1W2PQC6 194 aa20.11■□□□□ 0.81
GNE-204ENST00000539208 ZBTB5O15062 677 aa20.11■□□□□ 0.81
GNE-204ENST00000539208 TXKP42681 527 aa20.11■□□□□ 0.81
GNE-204ENST00000539208 PMS1P54277 932 aaKnown RBP20.11■□□□□ 0.81
GNE-204ENST00000539208 ZNF397Q8NF99 534 aaPredicted RBP20.11■□□□□ 0.81
GNE-204ENST00000539208 EXOC1Q9NV70 894 aa20.11■□□□□ 0.81
GNE-204ENST00000539208 LRWD1Q9UFC0 647 aa20.11■□□□□ 0.81
GNE-204ENST00000539208 BICDL2A1A5D9 508 aa20.1■□□□□ 0.81
GNE-204ENST00000539208 TRIM49BA6NDI0 452 aa20.1■□□□□ 0.81
GNE-204ENST00000539208 PPP1R11O60927 126 aaPredicted RBP20.1■□□□□ 0.81
GNE-204ENST00000539208 HOXA7P31268 230 aaPredicted RBP20.1■□□□□ 0.81
GNE-204ENST00000539208 MRPL12P52815 198 aaKnown RBP20.1■□□□□ 0.81
GNE-204ENST00000539208 GNG11P61952 73 aa20.1■□□□□ 0.81
GNE-204ENST00000539208 MTF1Q14872 753 aa20.1■□□□□ 0.81
GNE-204ENST00000539208 MYH4Q9Y623 1939 aa20.1■□□□□ 0.81
GNE-204ENST00000539208 LGALS16A8MUM7 142 aa20.1■□□□□ 0.81
GNE-204ENST00000539208 CCNE1P24864 410 aa20.1■□□□□ 0.81
GNE-204ENST00000539208 CASQ1P31415 396 aa20.1■□□□□ 0.81
GNE-204ENST00000539208 PDE4DQ08499 809 aa20.1■□□□□ 0.81
GNE-204ENST00000539208 TTBK2Q6IQ55 1244 aa20.1■□□□□ 0.81
GNE-204ENST00000539208 CUL5Q93034 780 aa20.1■□□□□ 0.81
GNE-204ENST00000539208 ZNF622Q969S3 477 aaKnown RBP eCLIP20.1■□□□□ 0.81
GNE-204ENST00000539208 TRIM47Q96LD4 638 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms