RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 TMEM87BQ96K49 555 aa20.18■□□□□ 0.82
GPN3-202ENST00000537466 NEK1Q96PY6 1258 aa20.18■□□□□ 0.82
GPN3-202ENST00000537466 MYL10Q9BUA6 226 aa20.18■□□□□ 0.82
GPN3-202ENST00000537466 ASTN1O14525 1302 aa20.18■□□□□ 0.82
GPN3-202ENST00000537466 PFASO15067 1338 aa20.18■□□□□ 0.82
GPN3-202ENST00000537466 SOWAHBA6NEL2 793 aa20.18■□□□□ 0.82
GPN3-202ENST00000537466 SNAI1O95863 264 aaPredicted RBP20.18■□□□□ 0.82
GPN3-202ENST00000537466 CAPN2P17655 700 aa20.18■□□□□ 0.82
GPN3-202ENST00000537466 QRICH1Q2TAL8 776 aa20.18■□□□□ 0.82
GPN3-202ENST00000537466 ANO1Q5XXA6 986 aa20.18■□□□□ 0.82
GPN3-202ENST00000537466 CATIPQ7Z7H3 387 aa20.18■□□□□ 0.82
GPN3-202ENST00000537466 ZNF654Q8IZM8 581 aa20.18■□□□□ 0.82
GPN3-202ENST00000537466 MSL3Q8N5Y2 521 aaKnown RBP20.18■□□□□ 0.82
GPN3-202ENST00000537466 PAWRQ96IZ0 340 aaKnown RBP20.18■□□□□ 0.82
GPN3-202ENST00000537466 PURBQ96QR8 312 aaKnown RBP20.18■□□□□ 0.82
GPN3-202ENST00000537466 SYNGAP1Q96PV0 1343 aa20.17■□□□□ 0.82
GPN3-202ENST00000537466 SEPT4O43236 478 aa20.17■□□□□ 0.82
GPN3-202ENST00000537466 ZNF865P0CJ78 1059 aaPredicted RBP20.17■□□□□ 0.82
GPN3-202ENST00000537466 HSPA4P34932 840 aa20.17■□□□□ 0.82
GPN3-202ENST00000537466 ANKLE1Q8NAG6 615 aa20.17■□□□□ 0.82
GPN3-202ENST00000537466 NUP133Q8WUM0 1156 aa20.17■□□□□ 0.82
GPN3-202ENST00000537466 KCNB2Q92953 911 aa20.17■□□□□ 0.82
GPN3-202ENST00000537466 TCEANC2Q96MN5 208 aa20.17■□□□□ 0.82
GPN3-202ENST00000537466 REC8O95072 547 aa20.16■□□□□ 0.82
GPN3-202ENST00000537466 BAATQ14032 418 aaPredicted RBP20.16■□□□□ 0.82
GPN3-202ENST00000537466 NRBP1Q9UHY1 535 aa20.16■□□□□ 0.82
GPN3-202ENST00000537466 PNMA2Q9UL42 364 aa20.16■□□□□ 0.82
GPN3-202ENST00000537466 DDX49Q9Y6V7 483 aaKnown RBP20.16■□□□□ 0.82
GPN3-202ENST00000537466 MSCO60682 206 aa20.15■□□□□ 0.82
GPN3-202ENST00000537466 LIFRP42702 1097 aa20.15■□□□□ 0.82
GPN3-202ENST00000537466 EXOSC10Q01780 885 aaKnown RBP20.15■□□□□ 0.82
GPN3-202ENST00000537466 SLC30A10Q6XR72 485 aa20.15■□□□□ 0.82
GPN3-202ENST00000537466 NFXL1Q6ZNB6 911 aa20.15■□□□□ 0.82
GPN3-202ENST00000537466 ARMCX2Q7L311 632 aa20.15■□□□□ 0.82
GPN3-202ENST00000537466 CCDC144CPQ8IYA2 1237 aa20.15■□□□□ 0.82
GPN3-202ENST00000537466 MTMR8Q96EF0 704 aa20.15■□□□□ 0.82
GPN3-202ENST00000537466 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.15■□□□□ 0.82
GPN3-202ENST00000537466 CNPY2Q9Y2B0 182 aa20.15■□□□□ 0.82
GPN3-202ENST00000537466 SNX14Q9Y5W7 946 aa20.15■□□□□ 0.82
GPN3-202ENST00000537466 PTPDC1A2A3K4 754 aa20.14■□□□□ 0.81
GPN3-202ENST00000537466 CCDC69A6NI79 296 aa20.14■□□□□ 0.81
GPN3-202ENST00000537466 CYTH3O43739 400 aa20.14■□□□□ 0.81
GPN3-202ENST00000537466 PPP1R11O60927 126 aaPredicted RBP20.14■□□□□ 0.81
GPN3-202ENST00000537466 DDAH1O94760 285 aa20.14■□□□□ 0.81
GPN3-202ENST00000537466 KRT32Q14532 448 aa20.14■□□□□ 0.81
GPN3-202ENST00000537466 DHX32Q7L7V1 743 aaKnown RBP20.14■□□□□ 0.81
GPN3-202ENST00000537466 FBXO11Q86XK2 927 aa20.14■□□□□ 0.81
GPN3-202ENST00000537466 TMTC2Q8N394 836 aa20.14■□□□□ 0.81
GPN3-202ENST00000537466 RIOX1Q9H6W3 641 aa20.14■□□□□ 0.81
GPN3-202ENST00000537466 CPA1P15085 419 aa20.13■□□□□ 0.81
GPN3-202ENST00000537466 RXRAP19793 462 aa20.13■□□□□ 0.81
GPN3-202ENST00000537466 RNF207Q6ZRF8 634 aa20.13■□□□□ 0.81
GPN3-202ENST00000537466 NECAB2Q7Z6G3 386 aa20.13■□□□□ 0.81
GPN3-202ENST00000537466 RAB11FIP4Q86YS3 637 aa20.13■□□□□ 0.81
GPN3-202ENST00000537466 MAP3K14Q99558 947 aa20.13■□□□□ 0.81
GPN3-202ENST00000537466 ZHX1Q9UKY1 873 aaPredicted RBP20.13■□□□□ 0.81
GPN3-202ENST00000537466 ABCB11O95342 1321 aa20.13■□□□□ 0.81
GPN3-202ENST00000537466 ZBTB5O15062 677 aa20.12■□□□□ 0.81
GPN3-202ENST00000537466 CALML3P27482 149 aa20.12■□□□□ 0.81
GPN3-202ENST00000537466 RPS6P62753 249 aaKnown RBP20.12■□□□□ 0.81
GPN3-202ENST00000537466 ACVR2BQ13705 512 aa20.12■□□□□ 0.81
GPN3-202ENST00000537466 HOMER1Q86YM7 354 aa20.12■□□□□ 0.81
GPN3-202ENST00000537466 CTCFLQ8NI51 663 aaPredicted RBP20.12■□□□□ 0.81
GPN3-202ENST00000537466 TBC1D5Q92609 795 aa20.12■□□□□ 0.81
GPN3-202ENST00000537466 LENG1Q96BZ8 264 aaPredicted RBP20.12■□□□□ 0.81
GPN3-202ENST00000537466 PIGSQ96S52 555 aa20.12■□□□□ 0.81
GPN3-202ENST00000537466 KATNBL1Q9H079 304 aa20.12■□□□□ 0.81
GPN3-202ENST00000537466 AKR1A1P14550 325 aa20.11■□□□□ 0.81
GPN3-202ENST00000537466 SGMS1Q86VZ5 419 aa20.11■□□□□ 0.81
GPN3-202ENST00000537466 JAKMIP1Q96N16 626 aaKnown RBP20.11■□□□□ 0.81
GPN3-202ENST00000537466 AMNQ9BXJ7 453 aa20.11■□□□□ 0.81
GPN3-202ENST00000537466 USP26Q9BXU7 913 aa20.11■□□□□ 0.81
GPN3-202ENST00000537466 ABHD16BQ9H3Z7 469 aa20.11■□□□□ 0.81
GPN3-202ENST00000537466 C11orf49Q9H6J7 331 aa20.11■□□□□ 0.81
GPN3-202ENST00000537466 SLC12A7Q9Y666 1083 aa20.11■□□□□ 0.81
GPN3-202ENST00000537466 ASB14A6NK59 587 aa20.11■□□□□ 0.81
GPN3-202ENST00000537466 ADCY6O43306 1168 aa20.11■□□□□ 0.81
GPN3-202ENST00000537466 ALDH5A1P51649 535 aaPredicted RBP20.11■□□□□ 0.81
GPN3-202ENST00000537466 GJC2Q5T442 439 aaPredicted RBP20.11■□□□□ 0.81
GPN3-202ENST00000537466 OPLAHO14841 1288 aa20.1■□□□□ 0.81
GPN3-202ENST00000537466 PLEKHA8P1O95397 391 aa20.1■□□□□ 0.81
GPN3-202ENST00000537466 COL6A1P12109 1028 aa20.1■□□□□ 0.81
GPN3-202ENST00000537466 KIF5BP33176 963 aa20.1■□□□□ 0.81
GPN3-202ENST00000537466 CMTR1Q8N1G2 835 aaKnown RBP20.1■□□□□ 0.81
GPN3-202ENST00000537466 RGS22Q8NE09 1264 aa20.1■□□□□ 0.81
GPN3-202ENST00000537466 PIBF1Q8WXW3 757 aa20.1■□□□□ 0.81
GPN3-202ENST00000537466 DPF3Q92784 378 aa20.1■□□□□ 0.81
GPN3-202ENST00000537466 HTATIP2Q9BUP3 242 aa20.1■□□□□ 0.81
GPN3-202ENST00000537466 BRPF3Q9ULD4 1205 aa20.1■□□□□ 0.81
GPN3-202ENST00000537466 MRPL11Q9Y3B7 192 aaKnown RBP20.1■□□□□ 0.81
GPN3-202ENST00000537466 DNAH12Q6ZR08 3092 aa20.09■□□□□ 0.81
GPN3-202ENST00000537466 KIAA1217Q5T5P2 1943 aa20.09■□□□□ 0.81
GPN3-202ENST00000537466 EPB41L2O43491 1005 aaKnown RBP20.09■□□□□ 0.81
GPN3-202ENST00000537466 HMGB1P09429 215 aaKnown RBP20.09■□□□□ 0.81
GPN3-202ENST00000537466 CALM1P0DP23 149 aa20.09■□□□□ 0.81
GPN3-202ENST00000537466 CALM2P0DP24 149 aa20.09■□□□□ 0.81
GPN3-202ENST00000537466 CALM3P0DP25 149 aa20.09■□□□□ 0.81
GPN3-202ENST00000537466 RARBP10826 455 aa20.09■□□□□ 0.81
GPN3-202ENST00000537466 CCDC144BQ3MJ40 725 aa20.09■□□□□ 0.81
GPN3-202ENST00000537466 APOA5Q6Q788 366 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 272.5 ms