RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 RNF180Q86T96 592 aa6.29□□□□□ -1.4
SNHG1-204ENST00000537068 PRPF38AQ8NAV1 312 aaKnown RBP6.29□□□□□ -1.4
SNHG1-204ENST00000537068 FGD4Q96M96 766 aa6.29□□□□□ -1.4
SNHG1-204ENST00000537068 FAM161BQ96MY7 647 aa6.29□□□□□ -1.4
SNHG1-204ENST00000537068 UPF3AQ9H1J1 476 aaKnown RBP6.29□□□□□ -1.4
SNHG1-204ENST00000537068 ARPP21Q9UBL0 812 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-204ENST00000537068 COG6Q9Y2V7 657 aa6.29□□□□□ -1.4
SNHG1-204ENST00000537068 SLC4A4Q9Y6R1 1079 aa6.29□□□□□ -1.4
SNHG1-204ENST00000537068 ELP1O95163 1332 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 SYNRGQ9UMZ2 1314 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-204ENST00000537068 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-204ENST00000537068 CTAGE5O15320 804 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 ADCY6O43306 1168 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 TIMP1P01033 207 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 OATP04181 439 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 RAG1P15918 1043 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 ACLYP53396 1101 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 PRSS12P56730 875 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 GJA9P57773 515 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 KCNA10Q16322 511 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 MFSD5Q6N075 450 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 AMOTL1Q8IY63 956 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 KBTBD3Q8NAB2 608 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 SLC43A3Q8NBI5 491 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 TTC13Q8NBP0 860 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 MAFAQ8NHW3 353 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-204ENST00000537068 NUP133Q8WUM0 1156 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 OSBP2Q969R2 916 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 SLF1Q9BQI6 1058 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 TEX13BQ9BXU2 312 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 LRRCC1Q9C099 1032 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 KATNBL1Q9H079 304 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 ABHD16BQ9H3Z7 469 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 CHMP4BQ9H444 224 aaKnown RBP6.28□□□□□ -1.4
SNHG1-204ENST00000537068 SLC38A10Q9HBR0 1119 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 PRDM5Q9NQX1 630 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-204ENST00000537068 FAM217BQ9NTX9 383 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-204ENST00000537068 TBX21Q9UL17 535 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 FAM184BQ9ULE4 1060 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 CNPY2Q9Y2B0 182 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 PLIN4Q96Q06 1357 aa6.28□□□□□ -1.4
SNHG1-204ENST00000537068 MYADML2A6NDP7 307 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 DCDC2CA8MYV0 355 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 PATL2C9JE40 543 aaKnown RBP6.27□□□□□ -1.41
SNHG1-204ENST00000537068 APBB1O00213 710 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 PLA2G6O60733 806 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 NDUFB10O96000 172 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 CD4P01730 458 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 ASGR1P07306 291 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 FDX1P10109 184 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 OAZ1P54368 228 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 FPGSQ05932 587 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 ACVR2BQ13705 512 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 PPP4R3BQ5MIZ7 849 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 TMEM240Q5SV17 173 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 SNRNP48Q6IEG0 339 aaKnown RBP6.27□□□□□ -1.41
SNHG1-204ENST00000537068 PCSK9Q8NBP7 692 aaKnown RBP6.27□□□□□ -1.41
SNHG1-204ENST00000537068 GMCL1P1Q8NEA9 526 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 CHST13Q8NET6 341 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 MYLIPQ8WY64 445 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 APPBP2Q92624 585 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 LENG1Q96BZ8 264 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-204ENST00000537068 PCMTD1Q96MG8 357 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-204ENST00000537068 NUP88Q99567 741 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-204ENST00000537068 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.27□□□□□ -1.412e-17■■■□□ 16.2
SNHG1-204ENST00000537068 DCTPP1Q9H773 170 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 EPB41L4AQ9HCS5 686 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-204ENST00000537068 STARD7Q9NQZ5 370 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 ECHDC1Q9NTX5 307 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 TMEM39AQ9NV64 488 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 MTMR4Q9NYA4 1195 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 CLIP2Q9UDT6 1046 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 FBXO40Q9UH90 709 aa6.27□□□□□ -1.41
SNHG1-204ENST00000537068 ZNF536O15090 1300 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 MROH7Q68CQ1 1323 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 PRUNE2Q8WUY3 3088 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 ARVCFO00192 962 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 RNF113AO15541 343 aaKnown RBP6.26□□□□□ -1.41
SNHG1-204ENST00000537068 SMARCA5O60264 1052 aaPredicted RBP6.26□□□□□ -1.41
SNHG1-204ENST00000537068 PQBP1O60828 265 aaKnown RBP6.26□□□□□ -1.41
SNHG1-204ENST00000537068 ZBED4O75132 1171 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 ZFYP08048 801 aaPredicted RBP6.26□□□□□ -1.41
SNHG1-204ENST00000537068 GNAT2P19087 354 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 DNAJB2P25686 324 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 NOVP48745 357 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 GRIN2CQ14957 1233 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 CCDC144BQ3MJ40 725 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 ARMCX2Q7L311 632 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 FAM126BQ8IXS8 530 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 IFNL3Q8IZI9 196 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 FAM133AQ8N9E0 248 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 NEDD1Q8NHV4 660 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 DDX11Q96FC9 970 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 CEP95Q96GE4 821 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 RNPC3Q96LT9 517 aaKnown RBP6.26□□□□□ -1.41
SNHG1-204ENST00000537068 GLT1D1Q96MS3 346 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 ZNF576Q9H609 170 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 MKNK2Q9HBH9 465 aa6.26□□□□□ -1.41
SNHG1-204ENST00000537068 RAVER2Q9HCJ3 691 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms